Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MAK10	Gene	0	105.35	91.29	117.28	103.55	149.87	91.55	97.31
2	376041	Transcript	0	11.73	15.70	18.08	25.70	6.90	20.62	3.30
3	361671	Transcript	0	140.72	121.76	158.90	153.21	228.97	139.06	157.94
4	376040	Transcript	0	13.27	15.19	17.14	20.34	12.03	18.66	11.58
5	ER1a	ExonRegion	1	31.04	6.64	20.23	19.01	49.12	6.13	8.53
6	E1a_E3a	KnownJunction	1	40.37	18.13	29.88	35.44	50.72	19.75	15.29
7	ER2a	ExonRegion	0	12.10	21.08	15.36	27.83	8.62	22.21	11.02
8	E2a_E3a	KnownJunction	0	34.98	35.81	49.71	51.88	28.29	49.74	32.89
9	ER3a	ExonRegion	0	162.89	121.82	153.25	116.49	120.61	99.62	81.04
10	E3a_E4a	KnownJunction	0	160.72	107.87	171.25	107.82	261.58	71.21	87.39
11	ER4a	ExonRegion	0	165.08	124.67	193.57	135.37	305.08	101.69	105.99
12	E4a_E5a	KnownJunction	0	118.23	94.29	139.05	106.90	285.53	91.71	78.03
13	ER5a	ExonRegion	0	167.05	155.93	196.50	146.79	200.73	114.84	121.12
14	E5a_E6a	KnownJunction	0	174.56	160.97	214.25	177.99	186.52	124.48	122.23
15	E5a_E7a	NovelJunction	0	1.79	3.60	2.64	11.11	0.00	6.32	0.00
16	ER6a	ExonRegion	0	201.81	182.08	227.56	183.40	230.58	122.22	136.70
17	E6a_E7a	KnownJunction	0	206.50	168.72	223.23	157.35	245.97	126.95	124.25
18	ER7a	ExonRegion	0	220.08	177.63	242.01	179.38	247.17	144.69	140.38
19	E7a_E8a	KnownJunction	1	17.49	21.67	22.14	35.60	9.20	29.59	4.61
20	E7a_E9a	KnownJunction	0	142.42	122.92	199.16	117.41	227.35	126.15	123.97
21	ER8a	ExonRegion	0	5.97	9.72	14.02	15.79	4.60	11.66	1.98
22	E8a_E9a	NovelJunction	1	2.07	1.63	5.82	17.31	0.00	11.12	1.61
23	ER9a	ExonRegion	0	137.62	134.05	189.86	128.01	223.33	130.50	127.71
24	E9a_E10a	KnownJunction	0	116.23	106.58	145.13	105.14	217.20	94.98	99.90
25	ER10a	ExonRegion	0	144.47	122.87	160.71	131.67	221.97	110.95	114.01
26	E10a_E11a	KnownJunction	0	106.01	94.13	129.06	112.43	216.77	89.11	86.93
27	ER11a	ExonRegion	0	138.35	105.55	156.83	124.84	236.25	104.59	131.18
28	E11_Da	NovelBoundary	1	18.94	15.34	33.89	22.81	13.28	11.82	3.84
29	E11a_E12a	KnownJunction	0	117.21	83.62	124.40	108.50	254.50	88.92	119.07
30	ER12a	ExonRegion	0	143.17	129.90	178.88	133.17	217.03	129.14	148.84
31	E12a_E13a	KnownJunction	0	123.05	111.50	164.54	133.56	165.73	118.43	146.73
32	ER13a	ExonRegion	0	178.95	146.80	208.98	169.54	248.93	145.52	162.26
33	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.42	0.00
34	E13a_E15a	KnownJunction	0	176.95	129.89	196.97	153.82	276.63	157.58	155.41
35	ER14a	ExonRegion	0	5.99	3.86	3.49	1.67	11.22	1.26	2.41
36	ER15a	ExonRegion	0	210.51	108.25	220.27	137.17	271.52	111.83	145.20
37	E15a_E16a	KnownJunction	0	286.62	128.78	276.17	185.57	227.25	154.45	148.01
38	E15a_E17a	NovelJunction	0	3.35	1.63	6.54	9.51	2.24	4.07	0.00
39	ER16a	ExonRegion	0	244.55	127.26	250.82	185.90	228.77	169.00	140.74
40	E16a_E17a	KnownJunction	0	181.30	111.44	190.29	153.20	199.66	141.88	112.50
41	ER17a	ExonRegion	0	197.56	117.38	208.14	136.13	261.37	129.59	145.42
42	E17a_E18a	KnownJunction	0	125.89	105.85	142.28	130.23	201.80	109.61	128.38
43	ER18a	ExonRegion	0	106.57	104.68	143.89	139.42	214.09	128.89	144.78
44	E18a_E19a	KnownJunction	0	103.14	110.02	144.92	137.46	246.53	148.85	144.83
45	E18a_E20a	NovelJunction	0	3.91	21.23	11.68	34.03	0.97	17.26	11.11
46	ER19a	ExonRegion	0	112.77	129.56	162.31	157.92	239.93	143.69	171.12
47	E19a_E20a	KnownJunction	0	101.51	138.90	159.73	149.60	247.86	154.82	199.39
48	ER20a	ExonRegion	0	148.95	162.95	177.30	161.75	276.70	145.17	201.01
49	E20a_E21a	KnownJunction	0	126.26	131.65	151.54	169.05	273.68	123.44	166.09
50	ER21a	ExonRegion	0	176.81	171.88	162.62	208.25	297.94	154.23	192.03
51	E21a_E22a	KnownJunction	0	188.85	162.17	180.15	218.65	370.80	170.77	214.23
52	ER22a	ExonRegion	0	166.00	187.73	188.06	232.87	321.93	205.25	267.79
53	E22a_E23a	KnownJunction	0	147.00	174.78	144.88	220.77	264.72	176.91	238.36
54	ER23a	ExonRegion	0	145.06	160.04	141.76	195.66	233.59	165.89	209.14
55	E23a_E24a	KnownJunction	0	116.33	119.22	161.94	160.49	293.12	178.70	238.86
56	ER24a	ExonRegion	0	91.34	86.57	109.05	125.67	208.00	125.67	149.64
57	E24a_E25a	KnownJunction	0	52.62	57.09	59.41	80.41	91.80	96.45	82.62
58	ER25a	ExonRegion	0	49.74	70.60	76.99	85.39	85.24	76.72	72.21
59	E25a_E26a	KnownJunction	0	49.44	53.96	80.13	70.17	82.97	65.07	63.67
60	ER26a	ExonRegion	0	71.42	71.58	84.08	81.39	79.26	103.05	59.15
61	IG22	Intergenic	0	25.16	20.25	30.63	22.60	33.41	17.56	24.05
62	IG22_AR1	ActiveIntergenicRegion	0	24.26	11.80	31.24	13.47	23.27	13.80	18.35
63	IG22_SR1	SilentIntergenicRegion	0	25.30	12.49	39.72	24.28	31.93	20.88	39.65
64	IG22_SR2	SilentIntergenicRegion	0	22.04	14.42	25.55	20.21	25.53	16.69	21.71
65	IG22_AR2	ActiveIntergenicRegion	0	25.46	22.24	30.56	24.26	35.61	18.15	24.74