Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZCCHC6	Gene	0	266.08	244.37	115.92	77.62	44.43	124.08	88.21
2	375961	Transcript	0	0	0	0	0	0	0	0
3	375963	Transcript	0	0	0	0	0	0	0	0
4	375960	Transcript	0	4.62	4.44	1.76	2.25	0.00	3.32	0.44
5	277141	Transcript	1	69.38	58.76	19.87	22.98	1.33	24.25	5.93
6	375947	Transcript	0	8.99	6.52	2.25	0.10	0.17	0.95	0.37
7	375948	Transcript	0	14.94	11.96	6.55	1.52	3.69	3.62	1.47
8	375957	Transcript	0	0	0	0	0	0	0	0
9	ER1a	ExonRegion	0	29.27	29.43	11.40	14.02	5.06	11.36	4.27
10	E1_Ab	KnownBoundary	0	87.25	81.49	33.44	40.69	12.84	29.43	19.79
11	ER1b	ExonRegion	1	216.20	203.16	55.97	70.62	16.61	75.80	34.64
12	E1a_E2a	KnownJunction	0	136.94	359.16	53.92	92.00	11.41	118.67	32.96
13	ER2a	ExonRegion	0	448.66	560.61	226.04	143.38	43.31	234.88	98.94
14	E2_Da	NovelBoundary	1	148.89	126.02	53.64	19.97	4.26	27.15	10.40
15	E2a_E3a	KnownJunction	0	461.48	631.15	248.13	159.30	64.96	262.77	129.24
16	ER2b	ExonRegion	0	435.97	631.54	243.91	153.47	62.79	263.35	131.65
17	I2_AR1	ActiveIntronRegion	1	88.33	53.26	30.58	10.15	1.45	14.11	3.82
18	ER3a	ExonRegion	0	454.59	639.16	231.00	167.52	88.92	256.23	180.68
19	E3a_E4a	KnownJunction	0	352.84	622.03	172.59	164.82	58.21	260.23	154.61
20	ER4a	ExonRegion	0	373.40	555.55	175.36	167.43	65.33	221.41	148.80
21	E4a_E5a	KnownJunction	0	504.54	622.34	266.48	225.48	149.71	291.15	241.71
22	ER5a	ExonRegion	0	271.53	327.85	129.51	106.33	74.83	137.60	113.59
23	E5_Da	KnownBoundary	0	16.29	10.61	3.35	2.60	1.18	4.66	0.70
24	E5a_E6a	KnownJunction	0	196.04	252.00	92.11	74.45	47.74	94.09	75.64
25	ER5b	ExonRegion	0	8.99	6.52	2.25	0.10	0.17	0.95	0.37
26	ER6a	ExonRegion	0	196.08	249.40	93.36	82.21	41.91	108.96	94.02
27	E6_Ab	KnownBoundary	0	185.34	242.54	89.40	82.47	37.00	101.87	100.52
28	ER6b	ExonRegion	0	168.05	243.78	86.23	84.66	44.61	113.61	100.57
29	E6a_E7a	KnownJunction	0	146.42	221.49	71.41	75.23	54.93	106.02	78.03
30	E6a_E8a	NovelJunction	0	5.46	18.68	2.70	5.01	0.00	5.90	0.00
31	E6a_E11a	KnownJunction	0	3.02	1.08	0.00	1.68	0.00	0.00	0.00
32	ER7a	ExonRegion	0	177.89	229.68	83.16	76.40	48.79	96.12	88.11
33	E7a_E8a	KnownJunction	0	185.94	196.69	82.07	68.57	49.06	83.16	74.14
34	ER8a	ExonRegion	0	192.82	234.36	90.80	83.83	57.38	105.24	80.42
35	E8a_E9a	KnownJunction	0	192.32	226.30	102.63	109.75	47.42	110.36	91.36
36	ER9a	ExonRegion	0	268.84	263.10	118.45	100.17	53.18	91.55	91.42
37	E9a_E10a	KnownJunction	0	300.89	284.13	115.05	98.34	52.15	105.24	92.41
38	ER10a	ExonRegion	0	390.57	343.56	152.01	125.80	59.86	128.50	106.16
39	E10_Da	KnownBoundary	0	8.81	34.47	2.69	3.63	3.50	0.00	0.89
40	E10a_E11a	KnownJunction	0	414.03	337.30	142.22	131.28	54.15	139.60	90.78
41	ER10b	ExonRegion	0	14.94	11.96	6.55	1.52	3.69	3.62	1.47
42	ER11a	ExonRegion	0	383.22	299.05	142.18	113.07	58.77	114.63	96.68
43	E11a_E12a	KnownJunction	1	76.91	68.31	13.35	28.93	1.04	28.62	4.70
44	E11a_E13a	KnownJunction	0	220.99	168.03	101.18	70.52	53.23	101.12	93.10
45	ER12a	ExonRegion	1	73.60	56.07	20.55	23.34	2.94	24.70	6.11
46	E12a_E13a	KnownJunction	1	57.61	51.91	25.69	16.66	0.00	19.43	6.99
47	ER13a	ExonRegion	0	295.27	229.43	140.97	88.91	45.58	115.12	101.72
48	E13a_E14a	KnownJunction	0	198.71	191.52	105.69	70.30	34.23	90.64	77.06
49	I13_SR1	SilentIntronRegion	1	59.79	21.49	14.83	5.38	1.86	5.24	1.41
50	ER14a	ExonRegion	0	240.09	258.61	119.24	86.68	47.11	122.66	107.33
51	E14a_E15a	KnownJunction	0	176.30	153.19	78.75	49.14	27.96	91.25	79.65
52	E14a_E18a	KnownJunction	0	6.23	7.80	3.52	2.82	0.00	6.65	0.89
53	ER15a	ExonRegion	0	229.49	185.99	131.24	66.98	47.86	122.07	102.97
54	E15a_E16a	KnownJunction	0	274.43	173.76	141.42	67.02	57.03	130.01	105.52
55	E16_Ab	NovelBoundary	0	249.56	156.84	128.50	87.15	53.16	95.73	87.54
56	ER16a	ExonRegion	0	273.14	174.40	139.99	81.28	57.80	126.41	107.78
57	ER16b	ExonRegion	0	260.82	155.10	129.19	67.81	44.07	93.16	97.93
58	E16a_E17a	KnownJunction	0	233.96	147.62	112.40	35.92	49.19	64.96	87.49
59	E16a_E18a	NovelJunction	1	108.48	74.45	39.42	40.37	1.04	80.00	4.20
60	ER17a	ExonRegion	0	249.10	159.94	126.91	40.01	68.56	69.37	107.93
61	E17a_E18a	KnownJunction	0	245.78	159.81	108.35	40.37	50.95	74.91	116.60
62	ER18a	ExonRegion	0	287.79	209.19	139.70	59.64	57.75	91.15	112.54
63	E18a_E19a	KnownJunction	0	283.29	219.37	136.27	74.61	61.62	85.12	90.63
64	ER19a	ExonRegion	0	331.51	275.59	152.17	77.06	68.11	135.54	128.14
65	E19a_E20a	KnownJunction	0	342.89	296.76	135.17	78.10	62.84	123.41	128.09
66	ER20a	ExonRegion	0	310.64	259.52	141.05	73.71	63.38	140.54	112.54
67	E20a_E21a	KnownJunction	0	292.96	218.53	140.27	64.80	55.03	138.21	102.56
68	E20a_E22a	KnownJunction	1	10.48	4.65	0.89	0.00	0.00	9.89	0.67
69	ER21a	ExonRegion	0	276.76	225.05	123.86	77.62	55.47	127.05	105.89
70	E21a_E22a	KnownJunction	0	251.17	220.79	121.53	75.69	44.35	142.55	84.90
71	ER22a	ExonRegion	0	282.59	202.16	145.37	67.40	51.07	123.65	98.90
72	E22a_E23a	KnownJunction	0	301.89	193.49	143.70	84.80	43.78	130.73	100.26
73	ER23a	ExonRegion	0	293.53	209.61	144.96	76.28	46.55	129.57	99.99
74	E23a_E24a	KnownJunction	0	406.57	198.66	159.81	50.44	38.50	122.26	100.65
75	ER24a	ExonRegion	0	427.78	203.39	176.94	71.08	45.55	158.51	109.99
76	E24a_E25a	KnownJunction	0	329.53	176.60	129.82	79.38	59.36	147.32	92.11
77	ER25a	ExonRegion	0	528.12	256.23	198.47	108.02	72.52	190.08	126.13
78	E25a_E26a	KnownJunction	0	609.87	314.94	197.58	115.71	72.78	190.68	135.47
79	ER26a	ExonRegion	0	609.84	261.56	180.31	106.24	83.86	176.79	140.62
80	E26a_E27a	KnownJunction	0	459.56	154.79	136.19	63.39	73.49	99.72	109.48
81	ER27a	ExonRegion	0	411.75	270.06	136.25	91.41	70.74	166.92	106.81
82	E27_Da	NovelBoundary	0	84.83	64.29	47.74	20.02	7.70	25.51	16.11
83	E27a_E28a	KnownJunction	1	101.66	105.80	17.66	49.55	31.26	76.92	32.79
84	I27	Intron	0	62.31	36.50	28.09	14.75	14.22	19.75	7.92
85	I27_SR1	SilentIntronRegion	0	73.45	36.05	37.51	13.84	11.72	12.34	8.46
86	I27_AR1	ActiveIntronRegion	0	98.80	62.21	44.98	25.85	25.70	37.18	11.64
87	ER28a	ExonRegion	0	198.92	125.98	64.72	40.69	30.70	116.68	68.66
88	ER28b	ExonRegion	0	9.99	4.25	2.71	0.00	4.05	3.68	0.00