Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RASEF	Gene	0	89.50	127.64	3.54	3.63	12.43	13.45	14.73
2	340717	Transcript	0	25.97	47.60	2.17	2.57	0.65	4.05	1.72
3	376447	Transcript	0	114.65	151.87	4.48	3.89	16.69	15.57	18.95
4	IG47_AR5	ActiveIntergenicRegion	0	23.73	16.65	0.73	0.21	2.52	1.10	4.56
5	IG47_SR3	SilentIntergenicRegion	0	10.55	7.65	0.37	0.23	1.74	0.90	1.95
6	IG47_SR2	SilentIntergenicRegion	0	14.22	7.82	1.41	0.00	1.28	0.80	1.52
7	IG47_AR3	ActiveIntergenicRegion	0	23.14	5.42	0.42	0.00	1.25	0.00	1.18
8	IG47_SR1	SilentIntergenicRegion	0	26.64	7.11	0.73	0.14	0.98	0.45	1.08
9	IG47_AR2	ActiveIntergenicRegion	0	10.04	13.51	0.49	1.40	0.86	0.00	4.22
10	ER1a	ExonRegion	0	15.43	57.55	0.73	1.63	1.32	9.14	1.98
11	E1a_E2a	KnownJunction	0	22.70	35.60	2.83	3.25	1.11	4.56	1.56
12	E1a_E3a	KnownJunction	0	30.54	107.98	0.89	1.41	10.83	16.21	8.51
13	I1_AR3	ActiveIntronRegion	1	22.73	11.09	0.45	0.35	1.03	1.90	0.17
14	I1_SR3	SilentIntronRegion	0	29.93	19.34	1.29	0.80	0.41	0.83	1.15
15	ER2a	ExonRegion	0	29.25	59.60	1.51	1.89	0.20	3.54	1.87
16	E2_Da	NovelBoundary	0	781.81	734.13	726.18	637.45	469.15	572.79	587.20
17	I2	Intron	0	34.70	16.98	1.36	0.69	0.32	1.90	1.59
18	I2_SR1	SilentIntronRegion	1	113.76	49.13	2.03	0.39	2.91	9.34	1.33
19	I2_AR2	ActiveIntronRegion	0	60.02	30.18	1.87	1.44	0.64	3.50	2.68
20	I2_SR2	SilentIntronRegion	0	48.38	22.60	2.13	0.82	0.26	1.78	2.20
21	I2_AR3	ActiveIntronRegion	0	23.14	22.82	0.60	0.97	0.26	3.46	2.06
22	I2_SR3	SilentIntronRegion	0	29.86	12.42	1.39	0.18	0.50	1.80	2.58
23	I2_AR4	ActiveIntronRegion	0	34.75	10.20	0.88	0.00	0.53	2.44	1.00
24	I2_SR4	SilentIntronRegion	0	49.16	20.24	2.09	0.86	0.55	2.15	2.30
25	I2_AR5	ActiveIntronRegion	0	24.07	19.64	1.44	0.24	0.42	2.74	1.35
26	I2_SR5	SilentIntronRegion	0	19.14	10.03	0.82	0.54	0.06	0.99	0.87
27	ER3a	ExonRegion	0	62.01	175.25	3.58	2.59	10.11	21.93	13.98
28	E3a_E4a	KnownJunction	0	72.18	182.90	4.21	2.95	10.95	25.59	16.14
29	ER4a	ExonRegion	0	93.56	193.70	3.61	3.41	12.40	26.81	16.78
30	E4a_E5a	KnownJunction	0	99.02	161.75	2.93	0.00	10.42	16.40	14.13
31	ER5a	ExonRegion	0	114.05	180.49	4.53	1.96	14.70	18.44	20.53
32	E5a_E6a	KnownJunction	0	121.34	155.95	5.27	0.00	12.91	17.63	14.22
33	I5	Intron	0	19.60	4.27	0.53	0.10	0.18	0.05	0.76
34	I5_SR1	SilentIntronRegion	0	19.62	4.28	0.53	0.10	0.18	0.05	0.76
35	E6_Aa	NovelBoundary	0	34.51	3.89	0.00	0.00	0.00	1.05	2.39
36	ER6a	ExonRegion	0	126.37	199.78	7.42	1.47	14.52	21.91	20.33
37	E6_Da	NovelBoundary	0	24.75	1.63	0.00	0.00	0.00	0.00	0.89
38	E6a_E7a	KnownJunction	0	143.65	187.18	8.51	1.41	23.31	24.17	20.71
39	ER7a	ExonRegion	0	125.79	155.56	7.05	1.42	18.11	15.15	19.80
40	E7a_E8a	KnownJunction	0	78.16	117.77	4.28	0.00	13.85	7.21	16.55
41	E7a_E9a	NovelJunction	0	22.33	64.34	0.89	0.00	0.00	7.08	4.82
42	I7	Intron	0	20.02	7.62	0.67	0.47	0.29	0.41	0.59
43	I7_SR1	SilentIntronRegion	0	20.04	7.63	0.67	0.47	0.29	0.41	0.59
44	ER8a	ExonRegion	0	102.78	112.66	5.46	3.56	14.18	11.41	15.78
45	E8a_E9a	KnownJunction	0	118.20	98.31	5.71	5.17	17.08	10.75	15.21
46	ER9a	ExonRegion	0	134.71	145.78	6.84	6.48	18.98	11.35	16.35
47	E9a_E10a	KnownJunction	0	134.55	158.08	3.94	11.59	12.26	19.30	18.96
48	ER10a	ExonRegion	0	128.42	145.35	5.68	7.03	16.89	18.42	18.58
49	E10a_E11a	KnownJunction	0	121.70	140.76	3.39	4.61	11.57	12.54	12.31
50	ER11a	ExonRegion	0	101.29	159.01	4.12	4.24	13.43	12.84	17.68
51	E11_Da	NovelBoundary	1	26.85	27.87	0.56	0.00	0.00	0.00	0.57
52	E11a_E12a	KnownJunction	0	83.68	142.81	3.03	5.28	12.56	7.53	20.55
53	I11	Intron	1	38.86	15.72	1.52	0.00	0.15	0.35	0.38
54	I11_SR1	SilentIntronRegion	1	39.14	15.83	1.53	0.00	0.15	0.35	0.38
55	E12_Aa	NovelBoundary	0	24.37	15.63	2.07	0.00	1.15	3.03	0.77
56	ER12a	ExonRegion	1	85.10	135.47	2.54	3.21	11.04	6.17	15.48
57	E12a_E13a	KnownJunction	0	69.25	93.29	2.34	1.16	15.88	5.55	15.06
58	E13_Aa	NovelBoundary	1	31.54	13.19	1.05	0.00	0.00	0.00	0.00
59	ER13a	ExonRegion	0	81.48	106.81	4.66	3.15	11.00	8.57	16.01
60	E13a_E14a	KnownJunction	0	105.01	97.62	3.56	1.11	9.31	10.61	17.67
61	ER14a	ExonRegion	0	104.82	138.73	6.31	3.80	18.10	11.42	20.62
62	E14a_E15a	KnownJunction	0	83.05	142.47	3.45	7.26	17.84	14.69	18.49
63	ER15a	ExonRegion	0	115.77	146.22	4.64	7.32	19.27	13.81	22.02
64	E15_Da	NovelBoundary	1	34.20	30.58	0.89	1.68	2.05	0.00	0.56
65	E15a_E16a	KnownJunction	0	135.87	120.51	6.85	7.94	26.58	14.23	27.87
66	I15	Intron	0	43.51	21.52	1.20	0.49	1.09	1.33	2.14
67	I15_SR1	SilentIntronRegion	0	37.58	20.90	1.57	0.34	1.29	1.45	1.92
68	I15_AR1	ActiveIntronRegion	0	57.74	22.30	1.14	0.39	0.83	0.93	2.73
69	I15_AR2	ActiveIntronRegion	0	51.66	18.38	0.46	0.00	1.54	0.47	1.55
70	I15_SR2	SilentIntronRegion	0	31.71	14.09	0.99	0.20	1.11	0.92	1.32
71	I15_AR3	ActiveIntronRegion	0	41.40	18.53	0.68	1.25	1.21	1.23	2.02
72	I15_AR4	ActiveIntronRegion	0	59.62	23.85	0.68	0.65	1.20	2.09	2.72
73	I15_AR5	ActiveIntronRegion	0	57.24	28.21	1.32	0.42	1.13	1.12	2.97
74	I15_SR3	SilentIntronRegion	0	38.15	23.22	0.40	1.35	0.66	2.68	1.77
75	E16_Aa	NovelBoundary	1	29.99	20.12	0.62	0.00	2.10	1.21	0.00
76	ER16a	ExonRegion	0	207.04	194.97	4.08	4.84	29.11	14.52	32.48
77	E16_Da	NovelBoundary	1	47.53	16.66	0.89	1.22	0.00	0.00	2.08
78	E16a_E17a	KnownJunction	0	179.90	218.71	3.56	5.01	32.99	30.26	23.62
79	I16	Intron	0	30.58	13.45	0.69	0.36	0.29	1.00	0.99
80	I16_SR1	SilentIntronRegion	0	30.62	13.47	0.69	0.36	0.29	1.01	0.99
81	ER17a	ExonRegion	0	180.76	230.24	3.79	4.74	29.25	21.62	28.11
82	E17_Da	NovelBoundary	0	37.95	18.97	0.85	0.00	0.92	3.32	1.75
83	E17a_E18a	KnownJunction	0	187.80	174.13	3.19	3.66	23.51	13.24	29.45
84	I17	Intron	0	33.49	15.20	1.20	0.50	0.55	1.66	1.46
85	I17_SR1	SilentIntronRegion	0	34.24	15.47	1.22	0.50	0.54	1.72	1.46
86	E18_Aa	NovelBoundary	0	31.38	23.22	0.00	0.00	1.04	3.38	1.40
87	ER18a	ExonRegion	0	140.96	139.72	4.09	6.74	21.08	17.92	22.53
88	IG46_AR2	ActiveIntergenicRegion	0	174.05	113.61	6.92	4.36	19.91	20.39	18.32