Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C9orf85	Gene	0	29.38	10.33	25.02	9.63	57.15	13.55	40.40
2	334731	Transcript	0	36.66	10.37	26.91	10.43	66.75	12.75	37.79
3	377031	Transcript	0	7.58	1.67	6.98	3.86	16.54	0.85	2.83
4	356065	Transcript	0	0.00	0.00	0.00	0.00	0.27	1.63	0.00
5	377027	Transcript	0	0.52	0.57	1.44	0.48	2.08	1.84	2.30
6	ER1a	ExonRegion	0	2.40	4.84	2.95	3.34	14.92	4.67	7.87
7	E1_Ab	KnownBoundary	1	10.15	12.30	8.28	11.65	38.61	13.75	27.93
8	ER1b	ExonRegion	0	27.50	15.46	26.28	16.02	82.86	20.99	58.65
9	E1_Ac	KnownBoundary	1	11.35	17.63	17.12	25.38	48.69	18.12	24.85
10	ER1c	ExonRegion	1	16.00	20.15	28.05	18.34	38.92	21.78	47.90
11	E1a_E3a	KnownJunction	0	0.00	1.10	0.79	0.00	0.88	2.17	1.89
12	E1a_E4a	KnownJunction	0	25.99	23.96	45.14	19.78	37.37	29.69	63.46
13	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.27	1.63	0.00
14	I2_AR1	ActiveIntronRegion	0	7.25	2.89	2.64	0.00	21.74	1.79	3.00
15	I2_AR2	ActiveIntronRegion	0	5.70	2.98	2.02	1.24	14.83	1.73	2.27
16	ER3a	ExonRegion	0	0.60	0.60	2.76	1.45	4.19	3.36	4.36
17	E3_Da	NovelBoundary	1	12.22	4.44	0.76	4.82	1.18	0.00	3.94
18	E3a_E4a	KnownJunction	0	0.97	0.00	0.78	0.00	1.18	0.00	0.64
19	ER4a	ExonRegion	0	49.58	17.43	51.01	17.59	81.12	27.19	83.84
20	E4a_E5a	KnownJunction	0	35.40	9.30	51.33	15.25	127.67	21.73	64.25
21	E4a_E7a	NovelJunction	0	2.34	1.39	6.80	0.00	7.91	4.15	8.83
22	ER5a	ExonRegion	0	45.66	13.43	48.17	11.38	92.02	21.81	86.73
23	E5a_E6a	KnownJunction	1	52.84	22.88	46.34	10.92	58.55	33.66	83.85
24	E5a_E7a	KnownJunction	0	2.84	0.00	3.13	0.00	5.46	0.00	0.00
25	ER6a	ExonRegion	1	56.85	20.53	43.41	8.59	91.00	27.98	83.91
26	E6_Da	KnownBoundary	1	57.21	18.73	23.88	10.29	102.49	15.33	80.13
27	ER6b	ExonRegion	0	36.66	10.37	26.91	10.43	66.75	12.75	37.79
28	E7_Aa	NovelBoundary	0	134.24	235.52	118.80	262.27	29.25	254.81	58.60
29	ER7a	ExonRegion	1	12.33	3.33	10.82	7.72	27.61	1.69	5.66