Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C9orf25	Gene	0	44.72	129.14	76.84	98.34	33.93	94.71	59.27
2	359556	Transcript	0	0	0	0	0	0	0	0
3	297620	Transcript	0	0	0	0	0	0	0	0
4	379078	Transcript	0	2.79	7.42	0.74	1.72	0.90	1.26	1.96
5	379087	Transcript	0	0	0	0	0	0	0	0
6	379080	Transcript	0	0	0	0	0	0	0	0
7	379089	Transcript	0	0	0	0	0	0	0	0
8	379084	Transcript	0	0	0	0	0	0	0	0
9	379081	Transcript	0	0	0	0	0	0	0	0
10	396938	Transcript	0	0.72	2.23	0.62	0.94	0.15	0.96	0.35
11	ER1a	ExonRegion	0	0.00	5.69	0.14	0.53	0.09	1.87	0.07
12	ER1b	ExonRegion	0	1.85	21.35	3.16	15.18	1.15	18.15	2.92
13	E1_Da	KnownBoundary	1	7.71	54.83	26.69	38.88	5.35	60.43	15.03
14	E1a_E5b	KnownJunction	0	0.83	1.29	0.89	0.00	2.24	3.27	2.87
15	ER1c	ExonRegion	0	9.99	53.34	30.28	40.32	6.14	54.58	15.45
16	E1b_E5b	KnownJunction	0	12.57	58.40	37.98	43.37	5.65	59.04	22.54
17	I1_SR2	SilentIntronRegion	0	17.15	14.16	23.48	9.20	0.53	4.90	5.70
18	I1_AR3	ActiveIntronRegion	0	13.76	14.00	18.24	10.28	0.78	4.06	5.34
19	I1_SR4	SilentIntronRegion	0	15.06	11.59	18.34	7.08	0.54	10.04	3.73
20	I1_AR4	ActiveIntronRegion	0	16.25	5.77	15.79	7.18	0.44	1.27	3.30
21	I1_AR9	ActiveIntronRegion	0	20.59	23.69	10.52	6.48	0.81	14.59	6.77
22	I1_AR10	ActiveIntronRegion	0	14.13	14.20	13.27	5.50	0.96	12.16	9.09
23	I1_SR10	SilentIntronRegion	0	15.79	21.83	10.70	9.78	1.06	9.27	8.47
24	I1_AR14	ActiveIntronRegion	0	23.42	23.70	13.72	14.45	1.37	12.30	11.77
25	I1_SR11	SilentIntronRegion	0	14.10	17.16	7.99	6.06	0.69	7.24	6.96
26	I1_AR15	ActiveIntronRegion	0	19.38	25.65	9.41	9.61	0.93	9.70	10.49
27	I1_SR12	SilentIntronRegion	0	13.37	18.25	6.49	3.91	0.51	7.08	8.10
28	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER5a	ExonRegion	0	2.87	8.91	2.48	3.74	0.59	3.84	1.39
32	ER5b	ExonRegion	0	20.89	94.73	42.58	79.34	13.68	82.42	29.44
33	E5_Da	KnownBoundary	0	15.00	72.09	28.48	57.62	8.23	47.92	25.18
34	E5a_E6a	KnownJunction	0	9.18	61.63	23.35	45.89	11.60	68.15	18.03
35	ER5c	ExonRegion	0	13.17	59.53	27.10	46.06	7.11	40.94	21.53
36	E5_Db	NovelBoundary	1	10.13	38.59	15.18	17.74	1.96	5.74	2.97
37	E5b_E6a	KnownJunction	0	11.37	57.30	30.41	37.03	5.23	43.84	19.85
38	I5	Intron	0	32.70	48.43	24.44	19.33	5.26	18.62	15.60
39	I5_SR1	SilentIntronRegion	0	34.51	42.51	24.96	19.12	5.24	15.65	13.71
40	I5_AR1	ActiveIntronRegion	0	36.35	57.75	30.16	20.91	5.77	24.66	18.82
41	I5_SR2	SilentIntronRegion	1	16.86	52.12	18.36	16.17	7.92	21.80	14.19
42	I5_AR2	ActiveIntronRegion	0	15.26	23.18	10.54	9.91	2.86	6.06	6.15
43	I5_AR3	ActiveIntronRegion	1	30.62	52.90	19.28	19.89	3.95	18.64	17.79
44	E6_Aa	NovelBoundary	1	18.16	47.26	16.86	19.99	3.27	14.95	17.83
45	ER6a	ExonRegion	0	36.91	228.30	90.07	150.05	37.93	165.52	73.58
46	E6a_E7a	KnownJunction	0	76.59	286.73	210.02	190.86	64.46	209.04	133.07
47	ER7a	ExonRegion	0	74.69	343.46	178.16	221.19	42.69	257.70	136.03
48	E7_Da	KnownBoundary	0	1.54	6.54	2.93	1.68	0.00	1.15	0.75
49	E7a_E8a	KnownJunction	0	55.49	318.02	118.54	194.73	35.06	230.02	107.86
50	ER7b	ExonRegion	0	2.79	7.42	0.74	1.72	0.90	1.26	1.96
51	ER8a	ExonRegion	0	48.02	291.23	108.49	168.36	40.88	203.45	93.01
52	E8a_E9a	KnownJunction	0	32.66	201.66	71.91	116.55	19.06	134.27	50.95
53	E8a_E9b	KnownJunction	0	12.42	61.11	29.32	33.67	13.95	51.70	23.58
54	ER9a	ExonRegion	0	35.54	227.48	93.31	134.36	26.12	159.38	68.64
55	ER9b	ExonRegion	0	67.97	283.61	170.03	172.01	67.15	220.72	128.74
56	E9_Da	KnownBoundary	1	43.48	198.30	102.29	110.18	43.36	157.93	84.35
57	E9a_E9c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	ER9c	ExonRegion	0	54.15	139.64	88.91	111.49	40.82	101.77	68.12
59	E9_Ac	KnownBoundary	0	48.30	82.94	47.68	81.08	29.76	79.62	45.57
60	ER9d	ExonRegion	0	38.19	83.04	37.11	68.63	26.67	67.93	40.28
61	E9_Db	KnownBoundary	0	28.26	63.55	28.63	42.24	20.79	43.90	28.39
62	ER9e	ExonRegion	0	23.35	48.63	31.32	30.26	16.30	29.37	24.84
63	ER9f	ExonRegion	0	0.77	0.00	2.03	1.25	0.81	1.23	2.02