Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	POLR1E	Gene	0	201.12	252.86	308.71	402.96	194.84	143.42	125.46
2	377798	Transcript	0	71.55	96.42	82.15	180.64	60.98	61.55	36.07
3	377792	Transcript	0	2.99	7.41	3.07	6.82	0.29	4.55	3.96
4	ER1a	ExonRegion	0	65.20	79.57	72.96	148.32	45.29	48.47	24.46
5	E1a_E2b	KnownJunction	0	77.91	113.28	91.35	212.96	76.67	74.64	47.68
6	ER2a	ExonRegion	0	2.99	7.41	3.07	6.82	0.29	4.55	3.96
7	E2_Ab	KnownBoundary	0	3.99	1.34	2.95	11.32	0.00	3.91	2.15
8	ER2b	ExonRegion	0	223.47	244.01	318.88	436.85	204.83	158.05	114.16
9	E2a_E3a	KnownJunction	0	407.64	317.15	492.05	553.63	350.54	203.79	149.05
10	E2a_E4a	NovelJunction	1	13.80	12.87	12.52	46.03	0.00	19.54	0.00
11	ER3a	ExonRegion	0	438.52	357.20	552.90	597.98	328.72	228.59	170.19
12	E3a_E4a	KnownJunction	0	474.33	427.86	658.06	687.87	291.76	267.78	168.15
13	ER4a	ExonRegion	0	394.18	441.76	622.89	746.48	330.63	286.64	194.46
14	E4a_E5a	KnownJunction	0	335.88	350.78	542.32	594.49	345.12	218.28	194.84
15	ER5a	ExonRegion	0	384.30	421.00	652.43	677.63	403.69	227.25	216.66
16	E5a_E6a	KnownJunction	0	441.25	481.27	684.49	684.13	421.68	234.63	229.00
17	ER6a	ExonRegion	0	288.97	448.95	510.89	580.96	314.18	206.54	210.12
18	E6a_E7a	KnownJunction	0	232.19	404.34	454.09	633.12	347.91	202.20	216.23
19	ER7a	ExonRegion	0	266.22	407.92	513.73	672.64	361.88	220.99	235.83
20	E7a_E8a	KnownJunction	0	249.01	370.32	486.18	615.37	294.04	246.34	206.46
21	ER8a	ExonRegion	0	297.23	375.54	507.30	609.19	315.78	229.60	212.53
22	E8a_E9a	KnownJunction	0	277.09	384.40	449.48	594.46	363.59	208.31	230.56
23	ER9a	ExonRegion	0	274.23	374.55	454.22	560.36	269.17	199.66	204.13
24	E9a_E10a	KnownJunction	0	305.63	377.18	492.46	498.61	329.19	209.95	219.84
25	E9a_E11a	NovelJunction	1	29.61	37.59	28.24	56.78	3.53	19.40	1.36
26	ER10a	ExonRegion	0	229.89	373.20	412.62	525.58	311.76	189.37	203.47
27	E10a_E11a	KnownJunction	0	202.08	344.44	352.48	489.59	269.63	147.67	174.54
28	ER11a	ExonRegion	0	234.94	364.06	394.47	559.62	266.01	190.16	197.63
29	E11a_E12a	KnownJunction	0	154.03	317.78	265.18	478.92	139.93	154.61	160.96
30	ER12a	ExonRegion	0	174.09	197.56	224.10	338.71	143.06	119.79	90.33
31	IG35	Intergenic	0	66.61	55.95	94.62	112.62	60.74	27.92	28.73
32	IG35_SR1	SilentIntergenicRegion	0	40.24	31.47	75.75	60.44	45.45	20.70	19.36
33	IG35_AR1	ActiveIntergenicRegion	0	69.04	66.02	105.25	118.00	69.19	26.80	34.32
34	IG35_SR2	SilentIntergenicRegion	0	53.77	37.42	81.92	67.45	40.36	20.15	19.15
35	IG35_AR2	ActiveIntergenicRegion	0	77.84	64.54	108.02	138.79	72.32	33.15	33.42
36	IG35_SR3	SilentIntergenicRegion	0	33.70	21.12	26.72	28.89	3.80	11.95	5.15