Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 SNAPC3 Gene 0 28.40 14.96 33.28 6.05 84.84 8.81 78.82 2 380813 Transcript 0 0 0 0 0 0 0 0 3 380807 Transcript 0 3.20 0.00 7.56 0.00 4.63 3.86 1.45 4 380821 Transcript 1 17.22 10.89 9.45 3.25 44.20 4.67 53.91 5 380799 Transcript 0 1.08 0.00 0.32 0.13 3.48 0.00 2.44 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 0 4.88 9.71 5.46 3.66 25.52 3.11 19.79 9 E1a_E2a KnownJunction 0 19.76 26.59 18.11 10.97 96.41 7.32 59.75 10 ER2a ExonRegion 1 32.74 33.13 43.63 16.66 118.89 8.85 91.02 11 E2a_E3a KnownJunction 0 48.15 39.99 70.24 18.72 82.41 17.74 116.47 12 ER3a ExonRegion 0 53.20 40.10 64.86 21.52 157.36 27.97 153.70 13 E3a_E4a KnownJunction 0 60.57 39.43 65.80 19.56 212.94 31.44 165.79 14 ER4a ExonRegion 0 78.33 42.30 93.73 24.42 206.33 36.93 209.82 15 E4a_E5a KnownJunction 0 60.55 34.63 72.53 24.54 183.57 31.52 211.63 16 E4a_E6a KnownJunction 0 3.20 0.00 7.56 0.00 4.63 3.86 1.45 17 E5_Ab NovelBoundary 0 37.24 24.27 40.80 14.22 109.66 16.94 117.79 18 ER5a ExonRegion 0 60.41 36.04 68.08 25.08 183.52 27.99 206.99 19 ER5b ExonRegion 0 70.64 30.18 86.85 17.95 224.80 19.42 174.76 20 E5a_E6a KnownJunction 0 59.05 22.46 79.12 16.12 187.21 14.42 154.46 21 ER6a ExonRegion 0 79.86 26.68 101.54 17.52 230.21 17.18 174.33 22 E6a_E7a KnownJunction 0 103.53 26.69 112.00 17.61 334.08 12.52 186.58 23 ER7a ExonRegion 0 73.70 30.64 89.75 17.24 224.68 20.38 203.74 24 E7_Da KnownBoundary 0 3.49 0.00 0.82 1.68 4.45 0.00 2.58 25 E7a_E8a KnownJunction 0 51.29 39.85 81.41 17.58 269.74 31.68 222.37 26 ER7b ExonRegion 0 1.08 0.00 0.32 0.13 3.48 0.00 2.44 27 ER8a ExonRegion 0 95.81 42.56 96.92 8.64 321.68 18.71 253.73 28 E8a_E9a KnownJunction 0 97.14 35.99 117.43 9.40 234.56 16.21 254.38 29 ER9a ExonRegion 0 52.29 21.47 80.56 5.63 148.74 15.84 145.47 30 E9_Da KnownBoundary 1 22.51 12.69 15.00 2.79 41.54 5.84 73.85 31 E9a_E10a KnownJunction 0 21.43 14.29 42.36 6.15 86.38 13.72 49.77 32 ER9b ExonRegion 1 17.22 10.89 9.45 3.25 44.20 4.67 53.91 33 E9b_E10a NovelJunction 1 0.80 0.00 2.33 1.68 11.16 1.66 13.10 34 ER10a ExonRegion 0 23.18 15.51 41.53 10.06 69.98 11.20 49.50 35 E10_Da NovelBoundary 0 15.24 4.73 26.23 2.65 59.41 6.86 27.36 36 E10a_E11a KnownJunction 0 3.37 3.26 0.89 0.00 5.35 0.00 1.43 37 I10 Intron 0 21.00 7.06 36.91 5.00 62.72 8.35 42.59 38 I10_AR1 ActiveIntronRegion 0 21.75 7.32 38.22 5.17 64.67 8.65 43.82 39 E11_Aa NovelBoundary 1 10.06 2.94 17.13 2.93 53.07 0.00 56.18 40 ER11a ExonRegion 0 3.99 1.52 4.08 1.96 43.08 0.74 12.26 41 E11_Da NovelBoundary 0 3.15 1.63 2.40 0.00 44.93 0.00 18.93 42 E11a_E12a KnownJunction 0 0.00 0.00 0.00 1.65 2.35 0.00 0.89 43 I11 Intron 1 4.21 1.69 6.10 0.98 31.08 1.18 18.74 44 I11_SR1 SilentIntronRegion 0 3.69 0.50 4.69 0.86 23.89 0.64 15.36 45 I11_AR1 ActiveIntronRegion 1 3.02 4.72 6.62 2.82 61.73 0.50 37.13 46 I11_AR2 ActiveIntronRegion 1 5.42 3.81 8.93 1.06 42.78 2.36 23.88 47 E12_Aa NovelBoundary 1 24.28 4.89 45.19 9.16 1598.37 25.57 71.11 48 ER12a ExonRegion 0 6.32 3.14 6.64 0.41 21.84 2.31 16.09