Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 NFIB Gene 0 342.04 82.74 649.06 248.73 18.24 79.12 63.99 2 397575 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 380945 Transcript 0 0.64 8.15 0.37 15.90 0.00 3.22 0.00 4 380921 Transcript 0 1.94 0.16 2.22 0.15 0.00 0.00 0.02 5 380934 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 380937 Transcript 0 1.25 0.00 1.27 0.16 0.00 0.00 0.00 7 397579 Transcript 1 18.91 8.41 40.01 15.66 6.34 4.07 10.49 8 397581 Transcript 0 72.86 30.15 137.51 82.78 5.41 13.29 24.70 9 380959 Transcript 0 0 0 0 0 0 0 0 10 380953 Transcript 1 65.04 4.02 128.41 74.50 0.00 13.00 12.73 11 380924 Transcript 1 20.31 2.60 65.66 12.41 0.00 1.04 2.46 12 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 I1_AR13 ActiveIntronRegion 0 78.84 12.20 96.58 40.51 1.65 7.80 6.52 15 I1_SR13 SilentIntronRegion 0 95.71 7.01 75.71 37.64 0.00 12.20 4.14 16 ER2a ExonRegion 0 0.64 8.15 0.37 15.90 0.00 3.22 0.00 17 ER2b ExonRegion 0 5.90 10.20 3.77 25.42 0.10 3.04 0.48 18 E2_Ac KnownBoundary 0 23.28 14.08 22.19 44.78 0.95 7.58 4.80 19 ER2c ExonRegion 0 88.23 77.06 178.26 172.55 6.25 42.20 20.21 20 E2_Ad KnownBoundary 0 219.39 92.24 493.29 291.64 17.50 80.67 51.69 21 ER2d ExonRegion 0 309.69 186.10 670.35 489.02 18.01 126.97 76.87 22 E2a_E3a KnownJunction 0 408.09 243.25 771.60 642.25 22.71 127.22 87.55 23 ER3a ExonRegion 0 469.88 288.12 941.74 668.12 29.48 175.62 117.19 24 E3_Da NovelBoundary 1 48.12 48.42 86.77 39.47 0.92 14.79 1.40 25 E3a_E4a KnownJunction 0 2.57 0.00 2.89 0.00 0.00 0.00 0.00 26 E3a_E6a KnownJunction 1 273.40 163.07 686.72 530.77 17.96 153.00 114.47 27 E3a_E7a NovelJunction 0 6.11 4.49 13.35 17.47 0.00 6.78 0.00 28 I3 Intron 1 53.33 23.96 89.52 20.01 2.38 6.71 0.74 29 I3_SR1 SilentIntronRegion 1 45.40 33.87 83.92 27.03 1.98 8.17 1.22 30 I3_AR1 ActiveIntronRegion 0 59.27 17.01 93.98 15.08 2.68 5.71 0.39 31 ER4a ExonRegion 0 1.31 0.33 1.55 0.30 0.00 0.00 0.05 32 ER5a ExonRegion 0 24.22 2.25 80.74 8.78 0.00 2.09 2.52 33 E5a_E6a KnownJunction 1 16.39 2.94 50.58 16.04 0.00 0.00 2.41 34 ER6a ExonRegion 1 291.79 216.96 827.71 583.60 17.47 193.84 126.96 35 E6a_E7a KnownJunction 1 345.97 213.67 1006.28 543.80 21.55 203.17 136.95 36 ER7a ExonRegion 0 393.41 228.39 1173.56 603.31 16.98 188.70 139.59 37 E7a_E8a KnownJunction 0 448.38 207.57 1214.42 558.81 13.07 160.16 131.61 38 E7a_E9a NovelJunction 1 9.63 4.26 32.06 19.70 0.00 1.05 0.67 39 E7a_E10a NovelJunction 0 7.36 3.36 13.02 11.30 0.00 1.42 0.89 40 ER8a ExonRegion 0 403.85 201.64 1127.28 551.28 26.71 189.76 127.64 41 E8a_E9a KnownJunction 0 528.32 180.91 1342.72 540.98 25.17 177.49 125.74 42 ER9a ExonRegion 0 521.39 218.99 1330.93 708.36 35.16 228.24 157.71 43 E9a_E10a KnownJunction 0 504.09 215.22 1174.75 695.24 46.04 236.13 159.21 44 ER10a ExonRegion 0 646.02 267.56 1463.70 838.62 35.83 296.54 190.81 45 E10a_E11a KnownJunction 0 479.42 247.71 999.56 721.19 51.45 218.87 182.38 46 ER11a ExonRegion 0 506.32 212.90 1044.36 723.14 34.75 208.02 172.22 47 E11a_E13a KnownJunction 1 185.91 85.80 370.61 293.37 10.70 80.32 90.39 48 E11a_E16a KnownJunction 1 18.91 8.41 40.01 15.66 6.34 4.07 10.49 49 E11a_E17a KnownJunction 1 157.74 50.73 349.30 347.88 4.06 95.49 57.55 50 ER12a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER13a ExonRegion 1 211.38 87.22 397.56 264.50 12.24 75.01 91.31 52 E13_Da NovelBoundary 1 101.68 26.14 189.24 126.95 5.67 17.45 32.59 53 E13a_E14a KnownJunction 1 49.85 35.26 113.54 90.21 6.36 37.31 32.25 54 E13a_E17a NovelJunction 1 4.29 0.00 22.40 15.25 0.00 3.59 2.05 55 E13b_E14a KnownJunction 1 63.79 30.61 119.78 68.68 4.63 11.74 19.06 56 E13b_E17a NovelJunction 0 13.82 4.12 41.13 29.66 0.00 12.22 0.62 57 ER13b ExonRegion 0 81.94 29.70 155.25 96.89 6.18 14.85 30.33 58 ER14a ExonRegion 1 148.46 67.07 290.31 156.11 9.82 41.02 73.45 59 E14a_E16a KnownJunction 1 153.11 76.19 229.05 119.31 17.57 21.44 78.56 60 E14a_E17a KnownJunction 1 65.04 4.02 128.41 74.50 0.00 13.00 12.73 61 ER14b ExonRegion 0 2.50 0.00 2.54 0.31 0.00 0.00 0.00 62 ER15a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER16a ExonRegion 0 164.26 64.36 273.80 92.49 13.51 31.44 55.04 64 E16a_E17a KnownJunction 0 145.30 58.61 265.77 97.31 5.39 46.34 51.56 65 I16 Intron 1 70.83 6.97 98.19 14.58 2.15 3.26 1.35 66 I16_AR4 ActiveIntronRegion 1 79.98 6.23 91.08 22.57 2.56 3.49 0.90 67 I16_SR5 SilentIntronRegion 1 83.84 6.76 118.70 12.46 2.37 3.35 1.50 68 I16_AR6 ActiveIntronRegion 1 108.63 9.30 133.31 23.30 3.25 3.68 2.10 69 I16_SR6 SilentIntronRegion 1 71.49 7.59 99.36 14.90 2.02 4.00 1.23 70 I16_AR7 ActiveIntronRegion 1 78.07 2.75 98.65 8.00 0.98 2.31 0.19 71 I16_SR7 SilentIntronRegion 1 94.02 7.12 120.26 9.09 1.40 3.51 1.32 72 I16_AR8 ActiveIntronRegion 1 81.63 8.48 116.01 16.33 2.20 3.79 1.81 73 I16_SR8 SilentIntronRegion 1 69.69 8.17 89.71 20.58 2.62 3.95 1.01 74 I16_SR9 SilentIntronRegion 1 81.64 9.25 115.51 17.74 2.11 3.81 1.81 75 ER17a ExonRegion 0 324.05 123.97 734.87 527.03 22.78 148.19 115.03 76 ER17b ExonRegion 0 519.75 82.12 906.18 285.53 21.34 105.95 78.35 77 E17_Db KnownBoundary 1 0.00 9.12 0.00 57.92 0.00 45.32 0.00 78 E17_Dc KnownBoundary 1 56.36 9.04 100.06 61.04 0.95 25.11 4.74 79 ER17c ExonRegion 1 108.09 25.51 166.64 137.58 2.43 85.82 11.47 80 ER17d ExonRegion 0 339.11 50.45 614.54 170.03 17.74 57.27 51.83 81 IG46 Intergenic 0 11.86 1.40 12.04 3.54 0.08 1.05 0.24 82 IG46_AR2 ActiveIntergenicRegion 0 37.64 2.53 36.13 6.76 0.30 3.23 0.42 83 IG46_SR1 SilentIntergenicRegion 0 8.50 1.26 8.91 3.12 0.05 0.77 0.22