Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C9orf68	Gene	0	6.05	8.38	10.10	2.88	2.00	1.07	1.54
2	403930	Transcript	0	0.06	0.00	0.56	0.00	0.56	0.00	0.00
3	381890	Transcript	0	0.97	1.38	4.31	1.68	0.00	0.00	0.34
4	406861	Transcript	0	0.63	0.00	0.00	0.00	0.00	0.00	0.00
5	223517	Transcript	0	0	0	0	0	0	0	0
6	381895	Transcript	0	1.34	3.91	2.57	0.56	0.15	0.39	0.39
7	381888	Transcript	0	2.06	1.32	4.16	0.00	0.00	0.00	0.30
8	381900	Transcript	0	1.35	0.49	0.73	0.00	0.09	0.00	0.00
9	ER1a	ExonRegion	0	0.13	0.00	0.34	0.00	0.00	0.00	0.00
10	ER1b	ExonRegion	0	7.86	3.29	10.34	3.35	2.91	0.48	0.36
11	E1_Da	KnownBoundary	0	14.20	5.83	17.65	4.01	6.73	1.66	0.87
12	E1a_E1d	KnownJunction	0	0.00	0.00	0.78	0.00	1.13	0.00	0.00
13	E1_Ac	KnownBoundary	0	3.76	12.35	11.42	0.00	0.00	0.00	0.00
14	ER1c	ExonRegion	0	12.19	13.24	20.37	2.33	4.40	1.23	0.67
15	ER1d	ExonRegion	0	5.73	12.01	13.07	1.44	2.16	0.29	0.46
16	E1_Ad	KnownBoundary	0	3.50	9.20	4.77	1.68	1.18	0.00	0.89
17	ER1e	ExonRegion	0	7.82	13.53	12.21	0.96	1.71	1.31	2.48
18	E1_Db	NovelBoundary	0	5.82	7.70	7.87	2.71	0.00	1.15	0.57
19	E1b_E2a	KnownJunction	0	15.22	14.63	18.35	2.55	0.95	5.20	4.99
20	I1_SR1	SilentIntronRegion	0	9.85	4.73	10.22	1.39	1.42	0.00	0.62
21	ER2a	ExonRegion	0	15.61	16.77	16.48	4.87	4.01	4.18	3.50
22	E2a_E3a	KnownJunction	0	18.29	17.60	12.16	2.63	2.10	4.82	6.00
23	ER3a	ExonRegion	0	9.75	16.29	11.99	5.73	1.29	2.80	5.05
24	E3a_E4a	KnownJunction	0	1.02	2.81	4.15	1.35	1.08	1.39	1.58
25	E3a_E5a	KnownJunction	0	3.54	6.86	5.12	7.48	0.00	0.00	1.71
26	ER4a	ExonRegion	0	1.54	4.02	5.31	2.76	0.31	1.23	1.37
27	E4_Da	KnownBoundary	0	0.78	1.47	1.60	0.00	0.00	0.00	0.00
28	E4a_E5a	KnownJunction	0	1.37	2.76	3.55	3.36	0.00	0.00	0.67
29	ER4b	ExonRegion	0	0.60	1.25	1.76	0.00	0.00	0.00	0.13
30	E4_Db	KnownBoundary	0	0.67	0.00	1.16	0.00	0.00	0.00	0.00
31	ER4c	ExonRegion	0	2.06	1.32	4.16	0.00	0.00	0.00	0.30
32	ER5a	ExonRegion	0	9.77	9.37	13.76	6.40	2.88	0.13	2.54
33	E5a_E6a	KnownJunction	0	6.76	7.86	12.49	2.95	3.18	0.00	1.69
34	ER6a	ExonRegion	0	8.10	7.48	20.12	3.47	2.20	1.34	1.01
35	E6a_E8a	KnownJunction	0	6.01	3.13	8.95	1.68	0.00	0.00	0.00
36	E6a_E9a	KnownJunction	0	5.24	6.04	1.58	0.00	0.00	2.33	1.45
37	ER7a	ExonRegion	0	0.57	0.00	5.07	0.00	0.00	0.00	0.00
38	ER8a	ExonRegion	0	6.45	4.65	13.45	0.90	2.38	0.31	0.48
39	E8_Ab	KnownBoundary	0	5.82	5.20	15.84	2.14	1.75	1.05	1.58
40	ER8b	ExonRegion	0	6.45	8.71	11.46	3.99	3.35	3.10	1.83
41	E8a_E9a	KnownJunction	0	7.33	8.56	9.43	6.53	6.87	3.75	0.69
42	ER8c	ExonRegion	0	0.63	0.00	0.00	0.00	0.00	0.00	0.00
43	ER9a	ExonRegion	0	8.74	13.40	14.55	5.78	2.18	3.17	2.03
44	E9_Da	KnownBoundary	0	3.00	11.51	9.94	2.87	2.05	0.00	2.64
45	ER9b	ExonRegion	0	3.98	14.26	11.34	5.81	1.35	1.23	2.34
46	E9b_E10a	KnownJunction	0	4.56	14.50	10.56	9.16	0.00	1.07	1.46
47	ER10a	ExonRegion	0	6.16	9.73	10.92	6.15	1.97	0.11	2.88
48	E10a_E11a	KnownJunction	0	4.72	6.57	3.09	1.54	2.05	0.00	3.98
49	E10a_E14a	NovelJunction	0	4.66	7.17	14.08	1.68	0.00	0.00	1.33
50	ER11a	ExonRegion	0	5.44	10.03	2.90	3.53	1.11	0.00	3.28
51	E11a_E12a	KnownJunction	0	2.70	12.40	1.95	4.69	0.00	0.00	0.76
52	ER12a	ExonRegion	0	5.46	10.40	9.27	2.10	1.59	0.51	1.65
53	E12a_E13a	KnownJunction	0	1.00	0.00	0.62	0.00	0.00	0.00	0.00
54	E12a_E14a	KnownJunction	0	1.55	15.40	12.75	1.68	0.92	0.00	0.89
55	ER13a	ExonRegion	0	3.76	0.52	1.49	0.00	0.34	0.00	0.00
56	E13a_E14a	KnownJunction	0	0.63	1.44	0.82	0.00	0.00	0.00	0.00
57	ER14a	ExonRegion	0	5.67	14.16	14.95	2.83	5.15	2.58	2.84
58	E14a_E15a	KnownJunction	0	7.13	11.74	19.40	1.68	4.01	4.21	3.37
59	ER15a	ExonRegion	0	9.80	15.61	21.54	2.77	5.15	1.36	2.74
60	E15a_E16a	KnownJunction	0	8.63	9.09	9.10	2.33	1.01	0.00	2.28
61	ER16a	ExonRegion	0	4.44	9.71	9.38	2.36	2.83	0.59	1.09
62	E16_Da	NovelBoundary	0	5.77	8.25	5.19	1.60	4.10	1.45	0.56
63	E16a_E17a	KnownJunction	0	0.70	1.63	0.70	0.00	0.00	0.00	0.00
64	E16a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	ER17a	ExonRegion	0	0.52	0.40	0.41	0.00	0.00	0.00	0.00
66	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER18a	ExonRegion	0	0.44	0.01	0.39	1.36	0.00	0.00	0.00
68	ER18b	ExonRegion	0	0.00	0.00	0.00	1.66	0.00	0.00	0.00