Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	XKR6	Gene	0	4.37	4.12	6.60	8.29	10.01	1.22	2.61
2	297303	Transcript	0	10.44	7.67	15.24	10.48	10.56	1.12	3.12
3	382461	Transcript	0	0.00	0.00	2.39	0.00	9.45	0.00	0.89
4	304437	Transcript	0	0.00	0.00	0.00	0.00	0.22	0.00	0.00
5	IG28_AR3	ActiveIntergenicRegion	0	3.45	3.75	2.43	7.06	9.60	0.00	1.81
6	IG28_SR1	SilentIntergenicRegion	0	2.87	5.17	6.19	10.50	7.04	1.30	3.15
7	ER1a	ExonRegion	0	3.06	11.88	4.34	27.68	5.37	3.66	3.68
8	E1_Da	NovelBoundary	0	4.29	7.80	7.87	14.25	4.45	1.15	1.38
9	E1a_E2a	KnownJunction	0	0.97	4.05	4.51	3.96	0.00	0.00	1.28
10	E1a_E4a	KnownJunction	0	0.00	0.00	2.39	0.00	9.45	0.00	0.89
11	I1	Intron	0	10.91	7.64	17.52	8.19	10.32	1.54	3.98
12	I1_SR1	SilentIntronRegion	0	6.55	6.85	12.05	8.16	6.04	1.87	2.51
13	I1_AR1	ActiveIntronRegion	0	12.00	8.28	20.29	4.30	8.41	1.28	6.79
14	I1_SR2	SilentIntronRegion	0	16.40	9.36	25.68	9.49	15.44	1.14	6.06
15	I1_AR2	ActiveIntronRegion	0	7.97	5.62	11.13	8.88	7.90	1.23	1.56
16	I1_AR3	ActiveIntronRegion	0	15.29	7.88	18.36	12.08	10.56	1.23	2.02
17	I1_AR4	ActiveIntronRegion	0	13.86	4.58	12.82	6.52	16.01	0.17	2.01
18	I1_AR6	ActiveIntronRegion	0	14.72	6.93	22.23	9.25	19.63	1.26	4.20
19	I1_AR7	ActiveIntronRegion	0	30.62	10.31	35.88	10.08	16.87	2.41	5.94
20	I1_AR8	ActiveIntronRegion	0	12.27	7.11	16.88	4.97	15.89	1.71	4.00
21	E2_Aa	NovelBoundary	0	13.80	7.41	29.53	2.71	5.42	5.90	6.18
22	ER2a	ExonRegion	0	19.90	11.29	25.97	17.00	21.11	2.23	4.97
23	E2_Da	NovelBoundary	0	13.75	2.78	23.27	5.77	8.16	3.32	3.93
24	I2	Intron	0	5.25	3.42	10.06	4.52	10.37	0.82	4.92
25	I2_AR1	ActiveIntronRegion	0	4.27	1.21	9.37	6.27	6.05	0.41	0.84
26	I2_SR1	SilentIntronRegion	0	9.83	5.32	17.40	8.20	11.66	1.57	4.99
27	I2_AR2	ActiveIntronRegion	0	19.93	5.61	20.39	8.69	15.69	0.55	6.50
28	I2_SR2	SilentIntronRegion	0	9.12	5.61	16.91	7.40	12.46	1.14	5.29
29	I2_AR3	ActiveIntronRegion	0	15.28	8.40	20.11	11.35	16.22	4.31	7.77
30	I2_SR3	SilentIntronRegion	0	4.39	1.21	11.57	2.46	17.30	0.60	8.94
31	I2_AR4	ActiveIntronRegion	0	3.20	3.46	8.79	3.54	14.43	0.00	4.57
32	I2_SR4	SilentIntronRegion	0	3.91	4.13	9.30	5.46	12.06	1.20	6.59
33	I2_AR5	ActiveIntronRegion	0	4.56	0.51	11.90	2.86	11.00	1.05	3.59
34	I2_SR5	SilentIntronRegion	0	4.68	2.68	9.45	4.22	13.59	0.59	6.45
35	I2_SR6	SilentIntronRegion	0	3.43	2.79	7.04	3.37	9.42	0.58	4.64
36	I2_SR7	SilentIntronRegion	0	2.47	2.36	5.21	2.51	10.50	0.70	3.51
37	I2_AR8	ActiveIntronRegion	0	3.66	3.67	8.69	3.77	10.58	0.00	7.05
38	I2_AR9	ActiveIntronRegion	0	3.36	2.30	8.17	2.44	7.82	0.13	4.37
39	I2	Intron	0	2.76	1.88	4.82	2.57	8.70	0.61	4.22
40	I2_AR1	ActiveIntronRegion	0	3.29	1.53	5.23	1.61	9.62	0.22	5.82
41	I2_AR4	ActiveIntronRegion	0	1.91	2.55	4.77	3.11	8.28	0.00	5.71
42	I2_AR5	ActiveIntronRegion	0	1.79	0.00	1.46	3.80	8.44	1.20	4.12
43	I2_AR6	ActiveIntronRegion	0	2.02	0.74	4.87	5.20	11.10	2.15	7.17
44	I2_SR3	SilentIntronRegion	0	2.08	2.92	5.26	4.32	9.58	1.05	4.48
45	I2_AR7	ActiveIntronRegion	0	3.74	1.57	7.06	3.88	11.34	0.74	3.78
46	I2_SR4	SilentIntronRegion	0	1.69	1.25	4.32	3.82	9.92	1.01	4.16
47	Ix	Intron	0	2.82	1.68	4.48	0.87	8.26	0.85	4.21
48	Ix_SR1	SilentIntronRegion	0	2.82	1.69	4.49	0.87	8.28	0.85	4.22
49	I2_AR2	ActiveIntronRegion	0	2.26	1.36	4.89	2.79	7.71	1.12	3.67
50	I2_SR3	SilentIntronRegion	0	3.78	2.82	8.32	3.27	14.24	0.46	5.93
51	I2_AR3	ActiveIntronRegion	0	7.24	17.78	25.67	54.05	24.91	4.15	11.68
52	I2_SR5	SilentIntronRegion	0	3.17	1.60	4.88	0.43	8.77	0.39	4.54
53	I2_AR5	ActiveIntronRegion	0	12.78	9.03	32.07	30.76	39.97	3.86	13.38
54	I2_SR6	SilentIntronRegion	0	11.59	8.42	29.74	23.41	37.44	4.84	10.19
55	I2_AR6	ActiveIntronRegion	0	19.09	13.14	32.69	31.55	62.26	4.31	18.61
56	I2_SR7	SilentIntronRegion	0	13.70	2.86	15.69	15.54	29.90	1.42	10.64
57	I2_AR7	ActiveIntronRegion	0	3.32	3.93	8.43	11.37	18.37	2.34	5.74
58	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.44	0.00	0.00
59	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	ER4a	ExonRegion	0	0.30	0.56	1.73	2.23	7.99	0.91	2.25
61	E4a_E5a	KnownJunction	0	0.00	1.21	2.53	2.28	8.21	0.00	4.53
62	ER5a	ExonRegion	0	0.96	0.43	2.55	1.28	8.75	0.34	1.79
63	IG27_AR9	ActiveIntergenicRegion	0	3.78	0.00	7.27	0.00	10.18	0.00	0.94
64	IG27_SR7	SilentIntergenicRegion	0	2.86	0.00	4.59	0.88	10.60	0.00	0.67
65	IG27_AR7	ActiveIntergenicRegion	0	1.88	1.08	4.93	1.92	9.28	0.62	1.32