Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	KIAA1967	Gene	0	150.05	241.35	216.63	222.22	232.94	121.51	147.42
2	308511	Transcript	0	41.76	132.13	65.60	111.70	129.59	59.99	50.84
3	389279	Transcript	1	4.93	6.50	26.25	16.60	9.09	13.11	6.48
4	IG16	Intergenic	0	7.08	17.78	5.65	8.73	1.03	7.19	6.77
5	IG16_AR1	ActiveIntergenicRegion	0	7.11	17.84	5.67	8.76	1.03	7.22	6.79
6	ER1a	ExonRegion	0	20.36	94.83	32.34	82.85	71.85	42.44	30.17
7	E1a_E3a	KnownJunction	0	63.15	169.42	98.85	140.55	187.33	77.53	71.51
8	ER2a	ExonRegion	0	7.27	12.99	16.69	16.51	7.91	17.02	6.86
9	E2a_E3a	KnownJunction	1	2.59	0.00	35.81	16.69	10.28	9.19	6.11
10	I2	Intron	0	30.69	16.45	31.14	18.51	3.32	13.37	17.61
11	I2_SR2	SilentIntronRegion	0	33.13	17.74	33.14	19.82	3.66	14.39	19.01
12	E3_Aa	NovelBoundary	0	48.83	19.13	56.13	20.72	2.77	12.52	23.88
13	ER3a	ExonRegion	0	45.70	159.06	97.73	125.45	84.96	91.18	79.58
14	E3a_E4a	KnownJunction	0	49.30	210.83	110.84	171.30	99.47	127.75	102.83
15	ER4a	ExonRegion	0	119.82	257.19	201.02	217.28	150.96	171.88	164.43
16	E4a_E5a	KnownJunction	0	122.84	218.11	208.67	182.54	348.86	144.83	171.46
17	E5_Aa	NovelBoundary	0	14.09	28.29	19.13	31.05	0.85	36.96	4.40
18	ER5a	ExonRegion	0	104.47	277.08	211.35	217.81	350.78	184.66	164.67
19	E5a_E6a	KnownJunction	0	100.47	271.15	232.35	189.88	284.73	163.99	152.57
20	ER6a	ExonRegion	0	145.51	338.39	293.45	250.22	231.90	199.10	211.72
21	E6a_E7a	KnownJunction	0	135.86	292.93	250.89	221.14	179.72	172.91	179.21
22	ER7a	ExonRegion	0	132.58	292.17	267.05	251.82	257.56	164.21	185.48
23	E7a_E8a	KnownJunction	0	167.78	263.16	344.54	245.96	490.33	183.12	220.26
24	ER8a	ExonRegion	0	186.43	252.34	304.26	231.58	345.53	125.85	148.26
25	E8a_E9a	KnownJunction	0	188.80	188.00	283.11	249.13	288.28	91.66	136.89
26	I8	Intron	0	30.62	26.88	23.37	17.00	8.20	20.09	8.82
27	I8_AR1	ActiveIntronRegion	0	41.32	31.13	31.35	16.37	12.14	22.37	8.53
28	I8_AR2	ActiveIntronRegion	0	38.34	30.22	27.54	19.08	8.29	16.91	10.71
29	I8_AR3	ActiveIntronRegion	0	39.56	48.81	29.69	36.71	11.71	31.13	16.00
30	E9_Aa	NovelBoundary	0	47.63	49.00	41.10	26.06	22.32	27.68	36.49
31	ER9a	ExonRegion	0	195.89	291.43	290.06	266.68	266.11	130.35	167.90
32	E9_Da	NovelBoundary	0	78.14	54.67	44.99	41.04	6.82	23.80	43.44
33	E9a_E10a	KnownJunction	0	202.17	261.01	284.55	255.98	239.68	104.71	154.68
34	I9_AR1	ActiveIntronRegion	0	37.24	26.17	31.61	19.71	11.78	24.09	15.15
35	E10_Aa	NovelBoundary	0	62.84	72.01	57.87	48.11	14.62	36.10	23.33
36	ER10a	ExonRegion	0	190.85	335.40	289.28	287.18	301.90	135.14	186.35
37	E10_Da	NovelBoundary	1	32.36	79.05	33.87	29.18	15.15	28.84	28.88
38	E10a_E11a	KnownJunction	0	122.97	252.81	249.76	270.13	311.40	83.45	173.54
39	E11_Aa	NovelBoundary	0	47.72	86.20	36.97	56.70	9.66	37.33	32.78
40	ER11a	ExonRegion	0	174.55	314.73	266.97	310.15	284.73	137.06	204.87
41	E11_Da	NovelBoundary	0	101.19	91.95	56.88	61.77	26.90	40.90	57.27
42	E11a_E12a	KnownJunction	0	100.77	233.19	195.54	291.80	214.65	155.73	170.70
43	I11	Intron	1	89.14	81.37	52.43	46.42	18.53	46.49	45.39
44	I11_AR1	ActiveIntronRegion	1	89.64	81.82	52.73	46.67	18.62	46.75	45.65
45	E12_Aa	NovelBoundary	0	42.91	82.68	39.48	46.00	8.81	37.20	39.07
46	ER12a	ExonRegion	0	139.91	293.85	219.00	253.23	256.20	136.50	185.16
47	E12_Da	NovelBoundary	0	56.20	100.20	36.30	42.89	12.31	45.16	51.19
48	E12a_E13a	KnownJunction	0	104.25	182.90	160.04	209.87	297.38	90.90	122.13
49	I12	Intron	1	43.90	81.23	37.16	55.89	14.21	38.44	42.26
50	I12_AR1	ActiveIntronRegion	1	44.09	81.58	37.32	56.15	14.27	38.59	42.44
51	E13_Aa	NovelBoundary	0	52.56	91.61	46.43	56.84	18.93	48.08	46.71
52	ER13a	ExonRegion	0	145.29	282.89	234.00	285.45	216.82	138.62	185.54
53	E13_Da	NovelBoundary	0	46.55	57.61	30.52	39.74	5.33	33.90	27.62
54	E13a_E14a	KnownJunction	0	101.19	308.27	181.77	249.29	197.56	114.38	112.06
55	E14_Aa	NovelBoundary	0	77.66	87.90	38.64	54.64	12.10	52.47	41.39
56	ER14a	ExonRegion	0	278.13	331.27	359.89	333.67	359.13	165.37	235.80
57	E14_Da	NovelBoundary	1	53.34	63.58	31.08	40.58	6.85	36.47	10.32
58	E14a_E15a	KnownJunction	0	269.33	260.85	330.66	265.06	380.03	134.72	198.36
59	E15_Aa	NovelBoundary	1	32.03	58.11	31.13	26.31	3.32	62.47	18.16
60	ER15a	ExonRegion	0	236.10	251.56	283.11	257.90	293.67	133.66	155.30
61	E15_Da	NovelBoundary	0	36.23	50.78	28.01	41.88	2.10	38.22	20.41
62	E15a_E16a	KnownJunction	1	149.37	179.64	260.66	231.47	329.24	56.71	127.11
63	I15_AR1	ActiveIntronRegion	0	25.82	54.14	21.45	32.48	4.15	25.73	18.80
64	E16_Aa	NovelBoundary	0	73.17	62.76	51.23	39.20	10.26	28.86	29.61
65	ER16a	ExonRegion	0	265.71	267.72	340.96	282.43	303.96	120.42	184.96
66	E16_Da	NovelBoundary	0	78.16	44.32	44.36	54.32	12.63	36.13	36.82
67	E16a_E17a	KnownJunction	0	164.76	250.05	273.93	281.04	368.85	137.72	171.36
68	I16	Intron	0	53.68	46.93	31.30	26.65	9.66	26.95	22.94
69	I16_SR1	SilentIntronRegion	0	54.46	47.59	31.73	26.99	9.78	27.36	23.24
70	E17_Aa	NovelBoundary	0	78.08	83.41	51.43	71.22	6.62	48.27	45.22
71	ER17a	ExonRegion	0	215.14	306.00	322.91	316.89	413.37	129.70	198.51
72	E17_Da	NovelBoundary	0	105.76	109.29	62.44	48.55	7.81	51.03	66.07
73	E17a_E18a	KnownJunction	0	196.82	298.63	294.18	282.26	364.72	118.62	181.49
74	E17a_E19a	NovelJunction	1	1.90	1.26	0.89	1.49	0.00	0.00	13.04
75	I17	Intron	1	48.19	70.85	39.00	38.87	11.07	41.38	38.44
76	I17_AR1	ActiveIntronRegion	1	61.84	89.33	47.94	45.91	12.95	54.11	46.97
77	E18_Aa	NovelBoundary	0	64.92	87.83	39.32	39.69	2.03	48.53	34.19
78	ER18a	ExonRegion	0	142.60	327.50	225.80	297.59	296.24	149.42	177.82
79	E18_Da	NovelBoundary	1	35.00	104.61	31.41	37.82	3.87	36.74	29.14
80	E18a_E19a	KnownJunction	0	131.83	285.07	207.45	288.55	278.71	135.71	163.54
81	E19_Aa	NovelBoundary	0	97.17	82.70	108.44	35.65	4.36	29.64	35.10
82	ER19a	ExonRegion	0	107.27	300.73	157.07	242.91	272.80	113.74	139.91
83	E19_Da	NovelBoundary	0	23.10	77.42	16.43	37.87	4.20	28.49	19.10
84	E19a_E20a	KnownJunction	0	104.63	252.57	155.29	193.57	249.36	92.06	140.26
85	E20_Aa	NovelBoundary	0	15.57	57.11	20.74	24.14	3.32	34.44	20.15
86	ER20a	ExonRegion	0	112.35	243.38	155.61	202.13	211.89	111.81	136.12
87	E20a_E21a	KnownJunction	0	90.86	172.05	147.94	178.39	157.34	95.97	110.68
88	ER21a	ExonRegion	0	77.52	192.15	112.80	170.39	145.38	87.43	84.16
89	E21_Da	NovelBoundary	0	47.12	76.71	38.23	38.82	20.15	36.61	22.19
90	E21a_E22a	KnownJunction	0	88.32	152.19	116.73	128.01	182.19	52.96	76.99
91	I21_AR1	ActiveIntronRegion	0	25.63	45.80	22.54	27.11	11.85	24.41	18.21
92	E22_Aa	NovelBoundary	0	52.29	91.00	41.63	47.63	23.33	58.91	37.71
93	ER22a	ExonRegion	0	179.61	232.62	231.55	220.82	247.16	128.82	153.75