Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 WDR86 Gene 0 1.56 5.85 2.32 2.27 9.98 8.87 0.02 2 392809 Transcript 0 0.00 0.00 0.00 0.00 0.92 1.66 0.00 3 334493 Transcript 0 0 0 0 0 0 0 0 4 341363 Transcript 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 0.00 0.32 0.61 0.00 0.77 0.13 0.00 6 ER1b ExonRegion 0 0.96 3.87 1.49 1.28 6.66 6.31 0.00 7 E1a_E2a KnownJunction 0 1.49 2.99 0.00 0.00 8.11 11.10 0.00 8 I1_AR2 ActiveIntronRegion 0 2.16 5.19 3.00 2.23 21.97 3.40 0.00 9 I1_SR2 SilentIntronRegion 0 1.39 3.30 2.65 0.38 11.80 1.47 0.00 10 I1_AR4 ActiveIntronRegion 0 1.24 4.16 1.64 0.70 8.37 0.66 0.00 11 ER2a ExonRegion 0 2.08 10.69 3.50 2.61 19.05 17.39 0.00 12 E2a_E3a KnownJunction 0 3.87 9.88 4.05 3.36 19.85 22.70 0.00 13 ER3a ExonRegion 0 1.46 10.01 2.14 2.96 12.75 13.38 0.00 14 E3a_E4a KnownJunction 0 0.62 3.26 2.23 0.00 11.30 14.18 0.00 15 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.92 1.66 0.00 16 E4_Aa NovelBoundary 0 2.65 2.57 2.00 1.54 11.23 0.00 0.00 17 ER4a ExonRegion 0 2.67 5.14 4.94 5.43 21.46 9.32 0.37 18 E4a_E5a KnownJunction 0 0.80 1.02 1.57 0.00 12.17 9.57 0.00 19 I4 Intron 0 3.31 4.27 4.76 4.56 10.00 5.45 0.16 20 I4_SR1 SilentIntronRegion 0 3.34 3.18 2.71 4.07 14.04 4.55 0.15 21 I4_AR2 ActiveIntronRegion 0 4.78 6.44 8.76 6.97 12.52 12.06 0.10 22 I4_SR3 SilentIntronRegion 0 2.79 3.94 4.17 3.92 7.57 3.50 0.19 23 E5_Aa NovelBoundary 0 2.85 5.81 0.88 5.42 12.17 8.09 0.00 24 ER5a ExonRegion 0 2.85 2.83 2.97 3.09 14.85 11.92 0.00 25 E5a_E6a KnownJunction 0 4.34 4.33 0.88 1.52 9.61 1.53 0.00 26 ER6a ExonRegion 0 1.68 4.65 2.33 1.90 6.19 5.98 0.00 27 IG1 Intergenic 0 8.56 7.80 9.74 6.64 3.91 9.97 0.71 28 IG1_AR7 ActiveIntergenicRegion 0 5.02 10.60 8.53 4.24 0.47 12.13 0.37 29 IG1_SR4 SilentIntergenicRegion 0 5.45 6.39 9.75 6.24 4.01 4.55 0.65 30 IG1_AR5 ActiveIntergenicRegion 0 10.85 10.94 12.55 10.56 7.20 12.88 2.03 31 IG1_SR3 SilentIntergenicRegion 0 6.20 9.11 13.20 7.28 5.74 14.39 0.50 32 IG1_AR4 ActiveIntergenicRegion 0 9.47 5.74 11.36 5.95 3.50 19.56 0.15 33 IG1_AR3 ActiveIntergenicRegion 0 16.74 10.82 14.11 12.32 5.50 15.96 0.43 34 IG1_SR2 SilentIntergenicRegion 0 21.51 9.37 17.60 11.08 8.08 18.01 0.91 35 IG1_AR2 ActiveIntergenicRegion 0 8.49 6.48 3.61 5.05 6.09 10.51 1.03 36 IG1_AR1 ActiveIntergenicRegion 0 3.01 3.27 1.67 0.58 8.29 4.53 0.57