Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 PTPRN2 Gene 0 0.20 0.04 0.39 0.94 8.73 10.35 0.10 2 409483 Transcript 0 0.23 0.00 0.00 0.00 0.65 0.25 0.00 3 403757 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 389418 Transcript 0 0 0 0 0 0 0 0 5 389413 Transcript 0 0.00 0.00 0.00 0.00 3.50 0.00 0.00 6 389416 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 404321 Transcript 0 0.00 0.00 0.00 0.25 0.11 0.00 0.00 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.41 0.00 0.00 11 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.00 0.00 0.00 0.49 0.21 0.00 0.00 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 0 0.00 0.00 0.27 0.00 4.11 0.00 0.00 16 E3a_E4a KnownJunction 0 0.00 0.00 0.89 0.00 4.54 0.00 0.00 17 E3a_E5a KnownJunction 0 0.00 0.00 0.73 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 0 0.34 0.00 0.11 2.11 7.93 1.77 0.00 19 E4a_E5a KnownJunction 0 0.00 0.00 0.66 3.87 8.58 1.18 0.00 20 ER5a ExonRegion 0 0.72 0.00 1.35 3.11 10.02 0.93 0.00 21 E5a_E6a KnownJunction 0 1.55 0.00 0.66 0.00 6.39 1.21 0.00 22 ER6a ExonRegion 0 0.69 0.00 0.96 2.24 6.37 2.15 0.00 23 E6a_E7a KnownJunction 0 0.87 0.00 0.83 0.00 4.06 4.34 0.00 24 ER7a ExonRegion 0 0.56 0.00 0.23 2.28 3.82 4.40 0.14 25 E7a_E8a KnownJunction 0 0.87 0.00 0.00 1.35 1.98 1.37 0.00 26 ER8a ExonRegion 0 0.34 0.00 0.00 0.53 4.03 1.69 0.00 27 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 8.78 1.42 0.00 28 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 7.82 2.45 0.00 29 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 6.25 3.11 0.00 30 ER10a ExonRegion 0 0.00 0.00 0.27 1.52 5.72 2.34 0.00 31 E10a_E11a KnownJunction 0 0.00 0.00 0.00 2.71 6.89 0.00 0.00 32 E10a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 3.50 0.00 0.00 33 ER11a ExonRegion 0 0.67 0.00 0.00 0.92 4.16 1.27 0.29 34 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 4.01 2.28 0.80 35 ER12a ExonRegion 0 0.00 0.00 0.06 0.00 6.71 0.89 0.30 36 E12a_E13a KnownJunction 0 0.00 0.00 0.55 0.00 5.07 0.00 0.00 37 ER13a ExonRegion 0 0.00 0.00 0.68 0.00 11.00 2.11 0.95 38 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 10.60 2.89 1.59 39 ER14a ExonRegion 0 0.00 0.00 0.48 0.43 8.31 14.08 0.43 40 E14a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 3.76 18.79 0.00 41 ER15a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER16a ExonRegion 0 0.33 0.00 0.00 0.50 9.82 15.87 0.00 43 E16a_E17a KnownJunction 0 0.63 0.00 0.00 0.00 12.68 26.88 0.00 44 ER17a ExonRegion 0 0.36 0.30 0.00 1.92 8.28 25.27 0.00 45 E17a_E18a KnownJunction 0 0.00 1.63 0.00 0.00 12.15 22.83 0.00 46 ER18a ExonRegion 0 0.00 1.74 0.00 0.49 9.72 21.01 0.00 47 E18a_E19a KnownJunction 0 0.00 1.05 0.00 1.63 18.74 14.45 0.00 48 ER19a ExonRegion 0 0.00 0.14 0.00 2.22 11.76 13.86 0.00 49 E19a_E20a KnownJunction 0 0.00 0.00 0.00 3.60 13.53 10.59 0.00 50 ER20a ExonRegion 0 0.00 0.00 0.00 4.23 9.51 16.70 0.00 51 E20a_E21a KnownJunction 0 0.00 0.00 0.00 1.25 9.52 14.20 0.00 52 ER21a ExonRegion 0 0.00 0.00 0.00 1.96 13.53 18.52 0.00 53 E21a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 11.37 11.44 0.00 54 ER22a ExonRegion 0 0.00 0.00 0.00 1.25 10.26 13.53 0.01 55 E22a_E23a KnownJunction 0 0.00 0.00 0.00 1.41 9.27 16.03 0.00 56 ER23a ExonRegion 0 0.00 0.00 0.00 0.40 12.92 18.20 0.67 57 E23a_E24a KnownJunction 0 0.00 0.00 0.00 0.00 11.20 13.19 0.00 58 ER24a ExonRegion 0 0.00 0.00 0.00 0.00 11.23 14.18 0.65 59 E24a_E25a KnownJunction 0 0.00 0.00 0.00 0.00 7.15 16.83 0.66 60 ER25a ExonRegion 0 0.00 0.00 0.18 0.00 13.45 18.22 0.14 61 E25_Da KnownBoundary 0 0.00 0.00 0.72 0.00 16.81 18.95 0.00 62 ER25b ExonRegion 0 0.21 0.00 0.79 0.28 12.75 15.90 0.09 63 ER25c ExonRegion 0 0.46 0.00 0.00 0.00 1.30 0.49 0.00