Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LMBR1	Gene	0	57.72	31.54	123.54	86.61	164.39	42.18	86.83
2	353442	Transcript	0	15.12	8.10	31.31	22.85	69.25	13.29	26.76
3	347571	Transcript	0	2.99	0.00	5.17	0.00	0.00	0.00	0.00
4	359422	Transcript	0	0	0	0	0	0	0	0
5	354505	Transcript	0	0.00	1.04	0.64	1.07	1.90	0.51	0.57
6	316198	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	0.00	5.11	0.00	4.55	3.57	3.88	6.23
8	E1_Ab	KnownBoundary	1	1.75	23.46	0.62	22.38	17.54	17.34	35.38
9	ER1b	ExonRegion	0	1.67	19.43	1.49	22.19	5.65	13.55	11.71
10	E1_Ac	KnownBoundary	0	9.41	29.16	11.96	37.01	14.06	15.79	11.22
11	ER1c	ExonRegion	0	46.16	42.32	50.45	104.54	126.45	39.83	71.46
12	E1a_E2a	KnownJunction	0	93.05	51.26	111.24	173.49	181.06	48.72	120.10
13	ER2a	ExonRegion	0	98.59	68.10	149.36	189.13	189.42	82.61	102.60
14	E2a_E3a	KnownJunction	0	81.80	74.64	124.16	175.69	241.69	88.55	83.02
15	ER3a	ExonRegion	0	147.79	74.08	206.97	227.85	286.06	102.65	120.53
16	E3_Da	NovelBoundary	1	13.29	16.39	6.97	2.93	5.26	5.98	5.29
17	E3a_E4a	KnownJunction	0	159.84	65.00	211.95	203.89	365.66	90.37	115.47
18	E3a_E5a	NovelJunction	0	0.97	1.26	4.07	8.34	11.64	1.47	4.20
19	I3_AR1	ActiveIntronRegion	1	15.52	11.19	5.87	7.84	5.15	6.06	0.86
20	I3_AR2	ActiveIntronRegion	1	11.81	10.34	7.13	8.45	5.15	1.17	1.04
21	I3_SR1	SilentIntronRegion	1	8.30	11.13	5.99	6.64	3.09	1.31	1.09
22	ER4a	ExonRegion	0	166.36	90.29	281.17	203.41	321.93	103.30	138.16
23	E4a_E5a	KnownJunction	0	174.76	91.87	292.62	166.07	397.36	81.79	125.10
24	ER5a	ExonRegion	0	128.36	77.96	255.62	157.32	301.74	89.45	130.19
25	E5a_E6a	KnownJunction	0	106.21	57.32	220.11	152.82	240.51	72.81	96.45
26	ER6a	ExonRegion	0	75.77	50.18	169.66	139.70	193.19	62.96	112.12
27	E6a_E7a	KnownJunction	0	61.39	31.87	145.67	111.72	181.61	43.52	102.97
28	ER7a	ExonRegion	0	63.58	35.31	142.43	120.42	162.70	42.01	120.35
29	E7_Da	NovelBoundary	0	31.51	18.94	64.74	58.27	64.85	19.81	53.53
30	E7a_E18b	KnownJunction	0	2.99	0.00	5.17	0.00	0.00	0.00	0.00
31	E7b_E8a	KnownJunction	0	52.19	37.25	121.31	121.07	140.30	31.84	127.42
32	ER7b	ExonRegion	0	56.96	36.60	133.02	125.01	145.87	36.17	141.41
33	ER8a	ExonRegion	0	52.49	37.77	124.27	124.27	135.93	30.88	128.85
34	E8a_E9a	KnownJunction	0	50.00	30.87	112.43	113.16	139.42	39.80	95.13
35	ER9a	ExonRegion	0	50.51	34.85	128.93	122.53	140.93	44.89	113.04
36	E9a_E10a	KnownJunction	0	0.00	1.02	0.00	1.44	2.77	0.00	0.76
37	E9a_E11a	KnownJunction	0	45.40	47.68	148.82	125.40	134.17	34.52	132.37
38	ER10a	ExonRegion	0	0.00	2.10	1.04	1.76	1.82	1.52	0.95
39	E10a_E11a	KnownJunction	0	0.00	0.00	0.89	0.00	1.11	0.00	0.00
40	ER11a	ExonRegion	0	43.32	40.54	134.04	119.22	143.07	38.07	124.90
41	E11a_E12a	KnownJunction	0	47.40	26.51	109.21	76.02	131.82	36.74	94.70
42	E11a_E13a	NovelJunction	0	0.00	0.00	0.80	8.80	0.00	3.32	0.83
43	E11a_E14a	NovelJunction	1	1.89	1.23	1.49	15.25	2.97	3.16	0.00
44	E11a_E16a	NovelJunction	1	6.88	4.86	15.12	26.63	4.36	1.15	4.94
45	ER12a	ExonRegion	0	53.15	28.98	135.78	78.22	136.88	28.25	96.84
46	E12a_E13a	KnownJunction	0	45.33	24.06	139.16	69.81	109.78	21.92	83.57
47	ER13a	ExonRegion	0	42.93	34.90	124.81	79.34	109.65	34.47	82.36
48	E13a_E14a	KnownJunction	0	51.69	36.36	129.97	77.94	144.36	36.80	91.49
49	ER14a	ExonRegion	0	62.08	33.93	166.44	88.01	184.95	40.77	99.18
50	E14a_E15a	KnownJunction	0	62.07	31.55	148.72	101.54	173.43	47.78	99.57
51	ER15a	ExonRegion	0	68.32	40.24	154.85	110.53	146.48	61.12	115.59
52	E15a_E16a	KnownJunction	0	85.62	47.66	178.11	120.88	215.64	77.29	122.59
53	ER16a	ExonRegion	0	82.51	53.13	179.93	127.60	215.86	79.25	127.71
54	E16a_E17a	KnownJunction	0	69.66	49.99	137.65	91.05	182.35	54.08	106.75
55	E16a_E18a	KnownJunction	1	9.40	10.90	28.71	45.76	13.65	20.88	9.62
56	ER17a	ExonRegion	0	87.51	37.08	164.59	109.47	225.77	53.54	124.36
57	E17a_E18a	KnownJunction	0	113.49	44.53	177.88	123.48	244.15	55.50	110.27
58	E18_Ab	NovelBoundary	0	48.47	14.61	68.73	52.83	88.43	24.60	42.05
59	ER18a	ExonRegion	0	116.17	56.99	202.41	184.10	242.51	81.47	130.26
60	ER18b	ExonRegion	0	115.49	59.36	201.75	200.22	197.25	93.41	140.59
61	E18_Da	KnownBoundary	0	66.48	45.00	127.21	155.96	157.61	74.15	104.42
62	E18a_E18c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
63	ER18c	ExonRegion	0	96.48	74.14	181.06	223.27	191.08	92.47	136.69
64	E18_Db	KnownBoundary	0	74.97	66.31	149.95	174.79	204.71	65.53	97.78
65	ER18d	ExonRegion	0	81.17	43.03	191.65	113.18	213.76	57.78	128.80
66	E18_Dc	KnownBoundary	0	72.03	33.00	151.56	116.46	221.88	41.24	125.27
67	ER18e	ExonRegion	0	40.05	16.73	84.58	55.45	155.05	28.14	63.15
68	E18_Ac	KnownBoundary	0	5.11	10.22	15.30	17.72	56.39	7.80	15.11
69	ER18f	ExonRegion	0	5.84	7.71	11.60	12.59	65.79	10.59	16.98
70	E18_Dd	KnownBoundary	0	10.36	3.26	14.03	11.05	94.40	12.49	18.77
71	ER18g	ExonRegion	0	5.32	2.45	9.35	8.57	49.15	7.85	10.89
72	IG46	Intergenic	0	4.12	4.12	8.10	7.64	11.25	4.41	5.54
73	IG46_SR8	SilentIntergenicRegion	0	8.23	3.10	6.38	8.31	50.14	7.56	7.58
74	IG46_AR9	ActiveIntergenicRegion	0	10.44	11.01	27.05	25.20	52.67	11.72	11.12
75	IG46_AR8	ActiveIntergenicRegion	0	7.17	7.69	17.07	17.12	5.38	8.99	10.42
76	IG46_SR6	SilentIntergenicRegion	0	12.08	16.14	28.35	26.72	12.61	17.51	22.26
77	IG46_AR7	ActiveIntergenicRegion	0	7.33	10.43	19.39	17.38	12.34	7.55	11.65
78	IG46_SR5	SilentIntergenicRegion	0	2.51	4.46	6.70	3.79	1.76	3.25	7.34
79	IG46_AR6	ActiveIntergenicRegion	0	3.89	4.21	8.48	8.15	4.67	2.38	4.33
80	IG46_AR5	ActiveIntergenicRegion	0	1.29	0.07	7.84	9.23	2.60	0.00	3.52
81	IG46_SR4	SilentIntergenicRegion	0	5.78	4.00	11.40	1.37	8.14	3.94	4.89
82	IG46_AR3	ActiveIntergenicRegion	0	2.64	5.80	8.15	8.33	6.42	6.74	6.65