Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 RELN Gene 0 0.67 0.66 3.11 1.72 0.38 16.88 0.10 2 389115 Transcript 0 0.06 0.00 0.11 0.00 0.07 1.84 0.00 3 343529 Transcript 0 1.10 0.17 3.48 0.88 0.93 26.11 0.00 4 ER1a ExonRegion 0 0.00 0.00 0.45 0.27 0.11 4.56 0.00 5 E1a_E2a KnownJunction 0 0.00 0.00 2.31 1.03 0.00 7.50 0.00 6 ER2a ExonRegion 0 0.00 0.00 1.59 2.39 0.37 15.97 0.00 7 E2a_E3a KnownJunction 0 0.00 0.00 3.00 3.22 0.00 16.35 0.00 8 ER3a ExonRegion 0 0.00 0.68 1.70 3.42 0.00 17.55 0.00 9 E3a_E4a KnownJunction 0 0.00 0.00 0.00 7.02 0.00 21.09 0.00 10 ER4a ExonRegion 0 0.00 0.91 1.35 3.39 0.25 17.94 0.00 11 E4a_E5a KnownJunction 0 0.00 1.37 2.24 1.57 1.18 9.73 0.00 12 ER5a ExonRegion 0 0.00 0.77 1.68 1.25 0.71 21.58 0.00 13 E5a_E6a KnownJunction 0 0.00 0.00 1.14 0.00 0.00 26.16 0.00 14 ER6a ExonRegion 0 0.00 0.00 2.00 2.02 0.00 20.25 0.00 15 E6a_E7a KnownJunction 0 0.00 0.00 2.21 2.76 0.00 16.80 0.00 16 ER7a ExonRegion 0 0.00 0.00 2.53 0.51 0.23 17.77 0.00 17 E7a_E8a KnownJunction 0 0.00 0.00 3.91 0.00 1.18 11.85 0.00 18 ER8a ExonRegion 0 0.00 0.00 3.60 0.41 0.36 16.03 0.00 19 E8a_E9a KnownJunction 0 0.00 0.00 1.61 1.30 0.00 19.16 0.00 20 ER9a ExonRegion 0 0.00 0.00 1.65 1.89 0.00 12.53 0.00 21 E9a_E10a KnownJunction 0 0.00 0.00 3.65 0.00 0.00 21.63 0.00 22 ER10a ExonRegion 0 0.00 0.00 1.45 1.51 0.34 12.60 0.00 23 E10a_E11a KnownJunction 0 0.00 0.00 1.55 0.00 0.00 8.42 0.00 24 ER11a ExonRegion 0 0.00 0.00 2.45 2.25 0.57 7.67 0.00 25 E11a_E12a KnownJunction 0 0.00 0.00 0.60 1.68 0.00 4.45 0.00 26 ER12a ExonRegion 0 0.00 0.00 1.91 1.56 0.00 8.46 0.00 27 E12a_E13a KnownJunction 0 0.00 0.00 2.36 0.00 0.00 7.69 0.00 28 ER13a ExonRegion 0 0.30 0.00 2.54 0.47 0.00 8.78 0.00 29 E13a_E14a KnownJunction 0 0.60 0.00 0.52 1.68 0.00 6.97 0.00 30 ER14a ExonRegion 0 0.49 0.00 2.24 0.70 0.00 12.07 0.00 31 E14a_E15a KnownJunction 0 0.00 0.00 2.23 1.06 0.00 5.15 0.00 32 ER15a ExonRegion 0 0.32 0.00 1.39 1.39 0.31 19.44 0.00 33 E15a_E16a KnownJunction 0 0.90 0.00 4.10 0.00 0.00 6.24 0.00 34 ER16a ExonRegion 0 0.16 0.00 2.09 0.42 0.00 5.48 0.00 35 E16a_E17a KnownJunction 0 0.00 0.00 0.52 1.68 0.00 7.50 0.00 36 ER17a ExonRegion 0 0.00 0.00 0.71 0.73 0.00 11.31 0.00 37 E17a_E18a KnownJunction 0 0.00 0.00 0.60 0.00 0.00 6.30 0.00 38 ER18a ExonRegion 0 1.03 0.51 2.12 0.00 0.00 6.87 0.00 39 E18a_E19a KnownJunction 0 1.03 1.39 3.19 0.00 0.00 10.59 0.00 40 ER19a ExonRegion 0 1.45 1.63 4.45 1.98 0.70 11.93 0.33 41 E19a_E20a KnownJunction 0 1.03 2.76 3.97 2.47 1.01 13.51 0.00 42 ER20a ExonRegion 0 1.77 1.86 3.48 3.73 0.74 14.84 1.07 43 E20a_E21a KnownJunction 0 0.00 0.00 1.93 1.46 0.00 10.45 0.00 44 ER21a ExonRegion 0 1.48 0.51 2.24 1.60 0.21 5.56 0.00 45 E21a_E22a KnownJunction 0 0.67 0.00 1.74 1.06 0.00 5.71 0.00 46 ER22a ExonRegion 0 1.35 0.82 1.71 1.11 0.34 7.33 0.00 47 E22a_E23a KnownJunction 0 1.03 0.00 2.00 1.44 0.00 8.87 0.00 48 ER23a ExonRegion 0 1.85 0.00 1.36 3.02 0.02 8.51 0.00 49 E23a_E24a KnownJunction 0 0.70 0.00 2.51 1.49 0.00 13.61 0.00 50 ER24a ExonRegion 0 0.67 0.00 2.09 1.68 0.44 10.18 0.00 51 E24a_E25a KnownJunction 0 0.00 0.00 1.64 0.00 0.00 11.71 0.00 52 ER25a ExonRegion 0 0.28 0.45 2.15 1.36 0.35 10.42 0.71 53 E25a_E26a KnownJunction 0 0.00 0.00 3.82 0.00 0.99 5.76 0.57 54 ER26a ExonRegion 0 0.34 0.54 2.12 1.10 0.06 9.95 0.25 55 E26a_E27a KnownJunction 0 0.00 0.00 3.58 0.00 0.00 7.66 0.73 56 ER27a ExonRegion 0 0.21 0.00 1.81 0.47 0.21 12.04 0.07 57 E27a_E28a KnownJunction 0 0.85 0.00 2.44 1.68 0.00 17.82 0.00 58 ER28a ExonRegion 0 0.79 0.85 1.00 1.31 0.00 10.80 0.22 59 E28a_E29a KnownJunction 0 1.55 1.10 0.00 1.27 0.00 11.82 0.00 60 ER29a ExonRegion 0 1.70 2.25 0.69 2.49 0.26 13.80 0.32 61 E29a_E30a KnownJunction 0 1.75 0.00 0.89 2.84 0.00 21.49 0.00 62 ER30a ExonRegion 0 1.62 0.08 4.12 1.62 0.20 10.66 0.00 63 E30a_E31a KnownJunction 0 1.40 1.18 7.57 0.00 0.00 5.90 0.00 64 ER31a ExonRegion 0 2.69 0.99 4.79 2.17 0.00 13.23 0.00 65 E31a_E32a KnownJunction 0 0.68 0.00 2.10 2.71 0.00 11.07 0.00 66 ER32a ExonRegion 0 0.72 1.19 3.05 2.49 0.11 12.71 0.00 67 E32a_E33a KnownJunction 0 1.57 0.00 0.00 1.14 1.18 21.01 0.00 68 ER33a ExonRegion 0 0.36 0.46 3.80 0.88 0.46 16.20 0.24 69 E33a_E34a KnownJunction 0 0.00 0.00 9.79 1.63 1.18 13.02 0.59 70 ER34a ExonRegion 0 0.43 0.70 5.71 0.57 0.38 16.32 0.21 71 E34a_E35a KnownJunction 0 0.00 3.26 4.21 2.41 0.00 15.03 0.00 72 ER35a ExonRegion 0 0.28 1.08 2.21 0.75 0.29 7.77 0.00 73 E35a_E36a KnownJunction 0 0.00 2.63 4.14 1.63 0.00 9.70 0.00 74 ER36a ExonRegion 0 0.22 1.77 3.59 1.88 0.00 10.64 0.00 75 E36a_E37a KnownJunction 0 0.00 1.08 7.36 3.14 0.00 7.96 0.00 76 ER37a ExonRegion 0 0.43 2.66 4.85 1.72 0.00 14.68 0.00 77 E37a_E38a KnownJunction 0 0.98 2.92 2.96 2.63 0.00 10.59 0.00 78 ER38a ExonRegion 0 0.56 1.67 4.86 2.66 0.00 13.45 0.00 79 E38a_E39a KnownJunction 0 1.02 1.05 6.73 5.26 0.00 11.58 0.00 80 ER39a ExonRegion 0 0.80 0.32 4.51 2.97 0.24 10.84 0.00 81 E39a_E40a KnownJunction 0 2.55 1.63 7.30 0.00 0.00 4.18 0.00 82 ER40a ExonRegion 0 0.52 2.32 3.34 0.92 0.00 10.49 0.47 83 E40a_E41a KnownJunction 0 0.00 3.26 1.26 0.00 0.00 9.46 0.00 84 ER41a ExonRegion 0 0.42 1.17 2.29 0.39 0.89 11.23 0.01 85 E41a_E42a KnownJunction 0 0.00 0.00 2.50 0.00 0.00 13.16 0.00 86 ER42a ExonRegion 0 1.28 2.00 4.57 2.75 0.41 22.47 0.00 87 E42a_E43a KnownJunction 0 3.22 1.31 4.51 4.69 0.00 33.66 0.00 88 ER43a ExonRegion 0 2.62 2.01 6.64 2.51 0.78 18.57 0.00 89 E43a_E44a KnownJunction 0 1.62 0.00 3.81 1.52 0.00 12.44 0.00 90 ER44a ExonRegion 0 0.57 0.47 4.87 1.72 0.80 9.75 0.26 91 E44a_E45a KnownJunction 0 0.00 1.44 3.85 0.00 0.00 6.94 0.80 92 ER45a ExonRegion 0 0.16 0.25 3.48 0.76 0.66 16.26 0.55 93 E45a_E46a KnownJunction 0 0.00 0.00 2.27 0.00 0.00 28.27 0.00 94 ER46a ExonRegion 0 0.23 0.00 2.16 2.06 0.49 24.64 0.00 95 E46a_E47a KnownJunction 0 0.00 0.00 2.53 1.52 0.00 15.57 0.00 96 ER47a ExonRegion 0 0.00 0.65 1.25 1.83 0.61 16.97 0.36 97 E47a_E48a KnownJunction 0 0.00 0.00 1.58 4.42 0.90 22.78 0.00 98 ER48a ExonRegion 0 0.00 1.28 2.21 2.77 0.21 13.68 0.00 99 E48a_E49a KnownJunction 0 0.00 1.63 4.74 1.46 0.00 10.37 0.00 100 ER49a ExonRegion 0 0.00 1.20 3.56 1.66 0.43 17.96 0.00 101 E49a_E50a KnownJunction 0 0.00 0.00 2.54 0.00 0.00 19.62 0.00 102 ER50a ExonRegion 0 0.51 0.72 1.61 1.58 0.00 18.29 0.20 103 E50a_E51a KnownJunction 0 3.15 0.00 0.65 1.49 0.00 23.82 0.00 104 ER51a ExonRegion 0 1.23 0.60 3.15 1.03 0.00 25.77 0.33 105 E51a_E52a KnownJunction 0 1.57 0.00 3.22 0.00 0.00 27.79 0.00 106 ER52a ExonRegion 0 1.17 1.05 4.56 2.96 0.38 26.67 0.00 107 E52a_E53a KnownJunction 0 0.75 1.63 3.56 2.28 0.00 13.40 0.00 108 ER53a ExonRegion 0 0.15 0.29 3.38 1.70 0.37 16.73 0.00 109 E53a_E54a KnownJunction 0 0.85 0.00 2.33 1.06 1.18 16.56 0.00 110 ER54a ExonRegion 0 0.38 0.00 4.41 2.88 0.57 15.47 0.00 111 E54a_E55a KnownJunction 0 1.02 0.00 3.82 4.09 0.00 15.84 0.00 112 ER55a ExonRegion 0 0.33 0.00 4.35 3.96 0.39 15.02 0.00 113 E55a_E56a KnownJunction 0 0.00 0.00 9.53 4.96 0.00 15.14 0.00 114 ER56a ExonRegion 0 0.58 2.13 4.67 3.23 0.70 24.50 0.00 115 E56a_E57a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 116 ER57a ExonRegion 0 0.99 1.78 5.80 0.79 1.37 40.39 0.00 117 E57a_E58a KnownJunction 0 1.00 0.00 3.18 1.68 0.00 26.88 0.00 118 ER58a ExonRegion 0 0.49 0.00 3.30 2.02 0.93 25.90 0.00 119 E58a_E59a KnownJunction 0 0.00 0.00 3.43 2.84 1.18 26.50 0.00 120 ER59a ExonRegion 0 0.36 0.00 3.19 2.86 0.86 29.62 0.00 121 E59a_E60a KnownJunction 0 0.00 0.00 1.62 3.79 0.00 29.35 0.00 122 ER60a ExonRegion 0 0.34 0.00 3.11 0.82 0.77 22.32 0.00 123 E60a_E61a KnownJunction 0 0.65 0.00 4.67 1.38 0.00 21.79 0.00 124 ER61a ExonRegion 0 0.42 0.00 2.53 1.68 0.18 25.46 0.00 125 E61a_E62a KnownJunction 0 1.03 0.00 2.26 1.25 0.00 52.15 0.00 126 ER62a ExonRegion 0 0.73 0.46 1.98 2.73 0.33 36.30 0.00 127 E62a_E63a KnownJunction 0 0.00 3.26 1.72 1.68 1.11 21.87 0.00 128 ER63a ExonRegion 0 1.04 0.94 1.89 0.96 1.19 18.92 0.00 129 E63a_E64a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 130 E63a_E65b KnownJunction 0 0.82 0.00 1.75 0.00 1.18 20.93 0.00 131 ER64a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 132 ER65a ExonRegion 0 0.19 0.00 0.34 0.00 0.20 5.52 0.00 133 ER65b ExonRegion 0 1.18 2.15 2.46 3.97 0.67 26.64 0.00 134 E65_Da KnownBoundary 0 2.95 3.52 2.79 5.23 0.00 21.82 0.00 135 ER65c ExonRegion 0 1.39 0.34 5.21 1.75 0.69 31.28 0.00