Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C7orf53	Gene	0	59.48	78.22	78.82	169.44	4.12	193.20	3.24
2	312849	Transcript	0	43.53	45.96	53.31	96.64	3.03	109.16	2.02
3	IG35	Intergenic	0	30.27	35.96	50.56	55.30	4.18	56.85	3.37
4	IG35_AR1	ActiveIntergenicRegion	0	64.40	79.99	81.78	110.65	13.45	92.82	7.70
5	IG35_AR2	ActiveIntergenicRegion	0	68.97	106.69	93.47	148.94	10.55	170.60	6.74
6	IG35_SR2	SilentIntergenicRegion	0	18.63	11.83	38.93	18.40	1.56	21.79	2.13
7	IG35_AR3	ActiveIntergenicRegion	0	17.07	12.20	33.07	15.31	1.00	16.03	0.78
8	IG35_AR7	ActiveIntergenicRegion	0	11.53	15.34	33.20	43.04	2.11	31.31	2.98
9	IG35_AR8	ActiveIntergenicRegion	0	17.63	21.81	43.02	55.75	1.64	35.07	2.55
10	IG35_SR3	SilentIntergenicRegion	0	23.40	20.03	47.71	59.29	3.79	48.94	4.74
11	IG35_AR9	ActiveIntergenicRegion	0	10.02	16.10	24.34	29.58	1.03	24.78	1.33
12	ER1a	ExonRegion	0	18.67	11.69	42.23	30.84	1.04	26.18	0.72
13	E1_Da	NovelBoundary	0	35.13	20.20	46.10	54.72	4.15	49.98	0.73
14	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	I1	Intron	0	23.29	11.70	44.99	27.27	1.99	26.93	2.01
16	I1_SR1	SilentIntronRegion	0	29.03	15.74	54.17	33.69	2.59	30.22	2.37
17	I1_AR1	ActiveIntronRegion	0	14.94	7.84	34.38	14.84	0.82	14.26	1.75
18	I1_AR2	ActiveIntronRegion	1	23.14	9.07	55.00	23.65	1.84	30.17	2.64
19	I1_SR2	SilentIntronRegion	0	32.49	14.90	60.51	40.64	1.26	55.95	2.05
20	I1_AR3	ActiveIntronRegion	0	12.00	7.52	21.93	14.83	2.95	24.16	0.82
21	I1_SR3	SilentIntronRegion	0	17.95	8.31	33.00	23.85	1.69	24.40	1.39
22	I1_AR4	ActiveIntronRegion	0	13.30	2.90	26.60	15.33	1.29	18.51	1.59
23	E2_Aa	NovelBoundary	0	18.81	10.14	28.61	25.68	0.00	23.91	0.89
24	ER2a	ExonRegion	0	33.35	32.01	43.27	57.00	2.18	73.80	2.20
25	E2_Da	NovelBoundary	0	61.49	16.21	55.50	35.33	0.99	40.33	3.67
26	E2a_E3a	KnownJunction	1	6.74	12.90	22.71	51.77	0.00	37.33	0.75
27	I2	Intron	0	71.21	39.14	90.87	82.54	3.21	97.90	3.60
28	I2_AR1	ActiveIntronRegion	0	62.69	27.43	66.97	63.45	2.21	62.32	1.76
29	I2_SR1	SilentIntronRegion	0	91.31	51.77	112.16	107.78	4.42	124.13	4.73
30	I2_AR2	ActiveIntronRegion	0	66.44	33.89	108.37	62.88	2.40	104.51	4.92
31	I2_AR3	ActiveIntronRegion	0	47.61	40.06	79.61	78.51	1.85	100.68	3.21
32	I2_SR2	SilentIntronRegion	0	24.20	16.02	40.18	41.01	2.46	52.92	1.77
33	I2_AR4	ActiveIntronRegion	0	32.73	22.60	50.14	53.20	1.77	70.32	1.95
34	E3_Aa	NovelBoundary	0	47.83	46.00	78.25	108.64	0.00	159.46	6.88
35	ER3a	ExonRegion	0	85.68	70.52	95.09	153.37	5.25	167.75	2.37
36	E3_Da	NovelBoundary	0	28.24	16.52	56.58	31.43	0.00	32.72	0.60
37	E3a_E4a	KnownJunction	0	87.12	87.62	76.48	152.20	7.47	192.58	3.80
38	I3	Intron	0	23.17	10.75	53.59	39.60	0.11	27.53	1.45
39	I3_SR1	SilentIntronRegion	1	23.19	10.76	53.63	39.64	0.11	27.55	1.45
40	E4_Aa	NovelBoundary	0	22.16	18.36	42.74	60.12	0.00	42.26	0.00
41	ER4a	ExonRegion	0	73.12	106.96	93.41	231.30	5.24	266.50	4.31
42	IG36_AR1	ActiveIntergenicRegion	0	6.14	4.08	6.04	4.85	0.66	10.22	0.00
43	IG36_SR1	SilentIntergenicRegion	0	11.55	5.93	10.80	12.00	0.43	9.71	0.51