Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	COG5	Gene	0	128.26	152.16	189.84	236.27	88.48	116.81	247.99
2	393603	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	297135	Transcript	1	71.15	128.62	131.25	181.82	115.18	99.84	306.77
4	347053	Transcript	0	0	0	0	0	0	0	0
5	ER1a	ExonRegion	0	5.38	26.54	9.36	45.53	5.65	21.65	23.11
6	E1a_E2a	KnownJunction	1	8.14	52.25	16.07	48.90	4.10	31.14	35.89
7	ER2a	ExonRegion	0	91.47	172.79	126.03	206.06	45.74	123.29	179.17
8	E2a_E3a	KnownJunction	0	151.51	198.48	175.39	292.77	139.82	141.10	241.14
9	ER3a	ExonRegion	0	156.16	249.93	188.41	315.57	113.57	183.31	249.30
10	E3a_E4a	KnownJunction	0	137.31	245.74	188.29	287.87	55.49	164.18	207.89
11	ER4a	ExonRegion	0	194.43	310.67	263.64	337.45	57.51	185.84	253.63
12	E4a_E5a	KnownJunction	0	203.20	311.74	275.02	320.95	67.59	179.02	241.54
13	ER5a	ExonRegion	0	217.38	276.41	270.16	304.35	79.30	150.13	250.55
14	E5a_E6a	KnownJunction	0	198.98	230.19	241.42	249.21	84.65	111.14	213.62
15	ER6a	ExonRegion	0	192.55	208.52	221.11	236.18	89.07	99.96	198.57
16	E6a_E7a	KnownJunction	0	203.30	216.03	254.89	234.01	111.69	104.89	205.00
17	ER7a	ExonRegion	0	259.36	287.10	316.94	318.73	113.74	145.73	241.25
18	E7_Da	KnownBoundary	0	323.92	265.13	313.04	370.69	121.03	150.86	242.10
19	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER7b	ExonRegion	0	308.66	263.19	308.99	357.70	126.13	160.78	243.26
21	E7b_E8a	KnownJunction	0	277.99	254.78	280.68	319.65	116.00	153.27	225.93
22	ER8a	ExonRegion	0	189.24	237.97	244.74	272.53	104.74	139.22	258.23
23	E8a_E9a	KnownJunction	0	131.87	223.78	204.76	272.59	102.22	114.30	268.69
24	ER9a	ExonRegion	0	111.74	196.57	198.04	260.41	84.27	114.39	275.05
25	E9a_E10a	KnownJunction	0	126.23	187.63	203.71	240.11	76.84	130.54	331.50
26	ER10a	ExonRegion	0	118.75	170.70	192.34	281.54	97.30	117.92	306.96
27	E10a_E11a	KnownJunction	0	107.73	158.73	187.85	265.19	112.29	127.14	272.73
28	ER11a	ExonRegion	0	146.88	155.92	223.97	244.45	114.76	131.06	293.17
29	E11a_E12a	KnownJunction	0	178.83	163.43	226.66	227.27	91.47	124.94	298.01
30	ER12a	ExonRegion	0	237.57	217.78	312.88	281.58	131.90	141.02	341.65
31	E12a_E13a	KnownJunction	0	245.94	209.33	329.67	296.32	124.02	111.25	321.94
32	ER13a	ExonRegion	0	162.49	173.14	254.85	265.10	116.18	106.50	305.21
33	E13a_E14a	KnownJunction	0	104.03	122.58	174.51	211.72	117.66	96.88	265.45
34	ER14a	ExonRegion	0	80.05	123.76	164.05	210.15	100.02	81.46	290.40
35	E14a_E15a	KnownJunction	1	39.22	107.13	132.78	223.91	88.91	99.83	242.52
36	ER15a	ExonRegion	1	64.51	134.19	140.47	229.63	86.25	99.24	300.20
37	E15a_E16a	KnownJunction	1	67.61	126.21	117.52	175.55	110.72	86.51	309.96
38	E15a_E17a	KnownJunction	1	6.83	5.81	13.36	48.01	1.18	7.83	0.00
39	ER16a	ExonRegion	1	66.95	129.58	126.52	175.15	115.90	107.19	311.44
40	E16a_E17a	KnownJunction	0	78.88	130.07	149.70	194.76	118.91	105.83	298.91
41	ER17a	ExonRegion	0	86.62	149.94	169.07	291.49	109.40	125.66	311.53
42	E17a_E18a	KnownJunction	0	75.96	146.17	141.95	271.02	110.54	119.61	249.64
43	E17a_E19a	NovelJunction	0	0.00	9.98	2.99	8.15	0.00	5.44	1.55
44	ER18a	ExonRegion	0	133.27	173.11	212.26	307.36	132.26	147.20	319.63
45	E18a_E19a	KnownJunction	0	159.21	166.38	232.89	265.19	123.52	141.10	328.93
46	ER19a	ExonRegion	0	111.80	171.99	173.87	275.22	104.72	152.96	340.92
47	E19a_E20a	KnownJunction	1	63.02	163.62	123.05	300.82	80.71	136.04	348.67
48	E19a_E22a	NovelJunction	1	0.00	1.31	5.07	14.22	2.24	5.82	1.45
49	E20_Aa	NovelBoundary	1	23.18	24.01	21.27	86.75	0.00	77.10	2.16
50	ER20a	ExonRegion	0	124.60	178.52	190.57	315.88	121.43	163.47	350.33
51	E20_Da	NovelBoundary	1	21.23	17.92	14.14	41.10	1.18	35.03	3.94
52	E20a_E21a	KnownJunction	0	106.05	137.45	172.96	270.26	132.51	136.97	340.51
53	E20a_E22a	NovelJunction	0	0.93	5.54	2.85	3.79	0.00	8.98	0.00
54	I20	Intron	1	9.70	14.96	11.62	37.44	0.67	36.42	2.18
55	I20_SR1	SilentIntronRegion	1	9.76	15.05	11.69	37.66	0.67	36.61	2.19
56	E21_Aa	NovelBoundary	1	5.84	14.21	8.90	41.83	0.00	46.87	1.48
57	ER21a	ExonRegion	1	67.70	159.63	156.86	275.47	88.97	135.07	311.30
58	E21_Da	NovelBoundary	0	11.47	33.71	11.17	52.67	2.24	32.21	7.19
59	E21a_E22a	KnownJunction	1	62.82	134.77	135.97	229.73	45.14	117.22	263.47
60	I21	Intron	0	20.45	26.52	25.14	40.67	6.44	32.04	11.25
61	I21_AR1	ActiveIntronRegion	0	19.23	30.14	23.23	45.86	5.45	32.20	11.15
62	I21_SR1	SilentIntronRegion	0	15.77	29.35	21.67	52.78	5.46	37.92	11.28
63	I21_AR2	ActiveIntronRegion	0	14.68	34.57	24.43	56.74	3.40	39.74	12.70
64	I21_AR3	ActiveIntronRegion	0	25.32	21.40	30.46	44.45	6.98	34.33	10.84
65	I21_SR2	SilentIntronRegion	0	14.09	22.24	22.65	32.19	6.25	31.01	9.06
66	I21_AR4	ActiveIntronRegion	0	24.42	26.55	26.62	30.12	8.32	28.63	13.36
67	E22_Aa	NovelBoundary	1	43.21	14.58	74.22	12.46	8.60	16.37	13.54
68	ER22a	ExonRegion	0	152.08	130.59	232.40	277.76	105.75	131.56	297.14
69	E22_Da	KnownBoundary	1	66.61	20.89	67.48	79.02	26.81	36.29	61.74
70	ER22b	ExonRegion	0	56.27	43.71	94.64	90.63	24.85	69.77	94.37