Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C7orf43	Gene	0	60.25	87.64	61.97	65.11	35.11	44.47	49.62
2	316937	Transcript	0	99.95	137.92	114.28	99.29	58.73	62.81	80.70
3	275726	Transcript	0	4.10	4.81	4.96	5.21	0.88	3.64	2.63
4	394035	Transcript	0	0.00	0.00	0.00	0.69	0.00	0.00	0.44
5	ER1a	ExonRegion	0	9.34	29.32	8.85	19.44	4.58	11.28	8.28
6	E1a_E2a	KnownJunction	0	26.70	94.66	55.73	55.65	17.84	39.77	31.80
7	ER2a	ExonRegion	0	47.51	114.59	67.32	89.13	37.38	45.68	45.69
8	E2a_E3a	KnownJunction	0	47.70	146.25	72.57	84.09	41.01	55.72	63.79
9	ER3a	ExonRegion	0	112.52	155.64	122.29	114.69	66.97	62.55	80.15
10	E3a_E4a	KnownJunction	0	134.50	136.19	139.26	118.25	113.30	76.73	97.60
11	ER4a	ExonRegion	0	118.36	169.61	134.36	126.65	64.38	79.01	105.40
12	E4_Da	NovelBoundary	1	5.24	23.67	4.02	6.50	1.18	13.40	3.71
13	E4a_E6a	KnownJunction	0	148.94	193.25	171.94	129.03	48.92	86.48	106.70
14	ER5a	ExonRegion	0	1.34	1.01	1.98	1.45	0.07	2.15	0.73
15	ER6a	ExonRegion	0	158.34	197.83	171.89	128.07	93.49	89.15	109.65
16	E6a_E7a	KnownJunction	0	171.59	201.48	178.74	138.76	90.62	99.53	142.47
17	ER7a	ExonRegion	0	112.07	141.32	130.09	101.04	57.36	68.65	86.22
18	E7a_E8a	KnownJunction	0	85.75	142.44	132.38	115.62	45.25	61.75	86.30
19	ER8a	ExonRegion	0	102.09	170.34	151.35	128.39	93.20	74.71	106.82
20	E8_Da	NovelBoundary	0	11.53	9.38	6.55	6.85	3.48	12.06	10.78
21	E8a_E9a	KnownJunction	0	81.65	115.31	92.89	102.65	48.57	46.31	67.16
22	ER9a	ExonRegion	0	112.39	125.40	103.16	92.25	60.63	68.99	83.40
23	E9_Da	NovelBoundary	0	19.79	19.34	12.89	5.01	13.30	7.77	18.04
24	E9a_E11a	NovelJunction	1	16.31	29.24	22.69	31.94	0.00	32.11	2.18
25	E9a_E11b	NovelJunction	1	1.90	10.35	3.39	9.94	0.00	0.00	0.00
26	E9a_E11c	KnownJunction	0	129.78	73.06	95.72	44.94	56.13	38.67	69.69
27	I9	Intron	1	27.02	19.22	7.31	4.33	14.01	5.22	13.96
28	I9_AR1	ActiveIntronRegion	1	27.28	19.40	7.37	4.37	14.14	5.28	14.10
29	E11_Aa	NovelBoundary	0	17.72	8.83	10.72	5.39	11.94	8.39	7.41
30	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E11_Ab	NovelBoundary	1	13.39	37.57	17.22	8.64	7.77	5.87	20.98
32	ER11a	ExonRegion	0	6.85	8.61	7.94	8.96	1.69	5.13	4.54
33	ER11b	ExonRegion	1	50.58	52.80	34.70	36.79	18.03	27.48	20.69
34	E11_Ac	KnownBoundary	0	65.66	74.51	51.65	28.61	16.02	38.38	33.75
35	ER11c	ExonRegion	0	114.04	140.92	100.24	96.12	62.28	76.53	89.48
36	E11a_E12a	KnownJunction	0	122.07	147.59	95.23	109.01	43.25	94.76	95.15
37	E11a_E12b	KnownJunction	0	0.00	0.00	0.00	1.38	0.00	0.00	0.89
38	E12_Ab	NovelBoundary	0	72.92	83.62	52.95	58.90	27.80	47.14	59.03
39	ER12a	ExonRegion	0	115.34	139.10	90.84	105.37	47.70	79.57	89.11
40	ER12b	ExonRegion	0	64.72	93.19	57.12	74.20	39.30	48.29	55.86
41	E12a_E13a	KnownJunction	0	44.09	82.36	36.37	53.53	18.23	31.36	45.66
42	E13_Ab	NovelBoundary	0	43.14	91.56	33.05	65.34	15.47	41.22	55.12
43	ER13a	ExonRegion	0	39.56	85.82	34.06	57.86	19.02	39.43	49.08
44	ER13b	ExonRegion	0	36.58	74.59	30.62	58.61	17.98	41.93	44.66
45	ER13c	ExonRegion	0	39.77	73.47	41.32	67.10	28.03	40.08	47.36
46	E13_Db	KnownBoundary	0	48.60	84.83	52.21	62.69	19.80	66.95	49.23
47	ER13d	ExonRegion	0	32.00	47.43	28.44	38.19	17.15	38.07	28.35