Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CYP3A43 Gene 0 0.81 0.27 1.38 0.16 2.03 0.19 0.31 2 379654 Transcript 0 1.56 0.19 1.19 0.00 7.70 0.56 0.00 3 354829 Transcript 0 0 0 0 0 0 0 0 4 222382 Transcript 0 0.00 0.00 0.27 0.00 0.00 0.00 0.08 5 312017 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 342499 Transcript 0 0.51 0.00 0.18 0.00 1.24 0.00 0.11 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 0.01 0.00 0.00 0.00 0.00 0.00 0.00 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 6.25 0.76 4.76 0.00 30.79 2.25 0.00 13 E3_Da NovelBoundary 0 167.80 131.99 104.39 81.49 35.34 68.82 64.42 14 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER4a ExonRegion 0 0.77 0.00 0.00 0.00 0.78 0.00 0.00 16 E4a_E5a KnownJunction 0 0.82 0.00 0.00 0.00 0.00 0.00 0.00 17 E4a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER5a ExonRegion 0 0.14 0.00 0.00 0.00 0.41 0.00 0.00 19 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER6a ExonRegion 0 0.00 0.00 0.01 0.00 0.36 0.00 0.00 21 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER8a ExonRegion 0 0.24 1.04 0.97 0.00 0.42 0.00 0.00 24 E8a_E9a KnownJunction 0 0.98 0.00 1.93 0.00 0.00 0.00 0.00 25 ER9a ExonRegion 0 0.25 0.00 1.84 0.00 0.03 0.00 0.00 26 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E9a_E11a KnownJunction 0 0.00 0.00 1.39 0.00 0.00 0.00 0.00 28 ER10a ExonRegion 0 2.03 0.00 0.71 0.00 4.98 0.00 0.42 29 E10_Da NovelBoundary 0 611.02 555.33 438.78 564.23 164.60 507.53 363.96 30 E10a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E10a_E14a NovelJunction 0 14.07 6.70 20.43 17.34 51.13 14.34 4.90 32 ER11a ExonRegion 0 0.46 0.00 1.43 0.74 0.32 0.73 0.00 33 E11a_E12a KnownJunction 0 0.00 0.00 2.86 0.00 0.00 0.00 0.00 34 ER12a ExonRegion 0 0.00 0.00 3.05 0.00 0.00 0.00 0.00 35 E12a_E13a KnownJunction 0 0.00 0.00 2.28 0.00 0.00 0.00 0.00 36 ER13a ExonRegion 0 0.00 0.00 2.67 0.59 1.01 0.00 0.00 37 E13a_E14a KnownJunction 0 0.00 0.00 0.70 0.00 0.00 0.00 0.00 38 ER14a ExonRegion 0 0.26 0.00 0.63 0.00 0.72 0.00 0.44 39 E14a_E15a KnownJunction 0 0.00 0.00 0.53 0.00 0.00 0.00 0.00 40 E14a_E15b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E14a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER15a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.17 43 ER15b ExonRegion 0 0.72 0.00 1.66 0.00 0.00 0.00 0.64 44 E15a_E16a KnownJunction 0 0.00 0.00 0.76 0.00 0.00 0.00 0.00 45 ER16a ExonRegion 0 0.94 0.72 1.70 0.29 0.06 0.14 0.79