Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LMTK2	Gene	0	79.91	152.67	102.48	228.13	61.01	63.03	69.42
2	297293	Transcript	0	70.95	148.41	92.53	222.82	55.80	62.77	53.60
3	ER1a	ExonRegion	0	8.71	42.35	8.67	65.78	5.97	20.83	7.66
4	E1a_E2a	KnownJunction	0	37.64	72.51	49.45	126.84	20.08	51.96	31.53
5	ER2a	ExonRegion	0	66.91	147.52	101.86	258.11	39.08	81.02	57.10
6	E2a_E3a	KnownJunction	0	94.85	212.19	142.07	290.42	61.92	86.51	63.57
7	ER3a	ExonRegion	0	113.77	192.48	137.78	301.21	58.63	96.67	63.16
8	E3a_E4a	KnownJunction	1	90.19	207.44	148.65	327.15	82.11	100.69	52.28
9	ER4a	ExonRegion	1	118.08	168.18	143.44	266.41	76.16	80.45	48.57
10	E4a_E5a	KnownJunction	1	127.03	137.64	132.26	246.83	80.39	80.72	42.44
11	ER5a	ExonRegion	0	120.66	192.53	147.68	305.80	85.22	73.94	55.04
12	E5a_E6a	KnownJunction	0	113.21	191.89	141.43	307.02	83.66	66.92	56.59
13	ER6a	ExonRegion	0	98.77	181.99	105.53	274.90	73.94	61.72	55.24
14	E6a_E7a	KnownJunction	0	68.11	141.60	67.47	225.32	84.40	61.37	52.84
15	ER7a	ExonRegion	0	58.66	150.93	74.30	216.46	54.06	55.18	46.08
16	E7a_E8a	KnownJunction	0	38.20	139.26	71.05	163.93	75.41	41.49	54.62
17	I7_AR1	ActiveIntronRegion	0	23.30	12.32	21.01	24.10	5.59	7.68	4.05
18	E8_Aa	NovelBoundary	0	20.53	3.44	28.17	11.41	5.21	5.90	8.86
19	ER8a	ExonRegion	0	60.99	155.12	92.35	177.49	55.33	56.87	59.86
20	E8a_E9a	KnownJunction	0	61.50	174.94	84.99	223.99	56.53	54.94	69.35
21	E9_Aa	NovelBoundary	1	36.10	10.17	17.55	7.88	5.07	0.00	1.55
22	ER9a	ExonRegion	0	68.81	173.67	106.60	245.26	52.02	65.30	69.49
23	E9_Da	NovelBoundary	1	52.52	18.84	35.58	14.71	5.90	1.66	4.97
24	E9a_E10a	KnownJunction	0	47.63	151.40	91.80	238.27	55.56	45.18	56.16
25	E9a_E11a	NovelJunction	1	0.88	5.78	0.68	10.48	2.10	0.00	0.00
26	I9	Intron	1	28.55	10.53	23.60	7.92	7.11	4.12	3.41
27	I9_SR1	SilentIntronRegion	0	22.39	7.86	20.97	6.67	6.40	2.95	2.37
28	I9_AR1	ActiveIntronRegion	0	24.28	12.51	17.18	10.47	7.15	3.51	4.11
29	I9_SR2	SilentIntronRegion	1	39.12	11.35	32.69	6.74	7.81	5.95	3.79
30	E10_Aa	NovelBoundary	1	24.05	17.84	27.10	21.75	8.23	6.83	5.52
31	ER10a	ExonRegion	0	59.55	149.33	98.39	223.16	55.55	70.32	69.03
32	E10a_E11a	KnownJunction	0	60.10	148.62	83.71	175.66	52.03	56.09	54.16
33	ER11a	ExonRegion	0	97.25	177.57	125.98	263.49	71.71	71.08	87.68
34	E11a_E12a	KnownJunction	0	47.42	109.42	55.90	167.48	33.22	49.10	61.70
35	E11a_E14a	NovelJunction	1	0.00	1.50	1.16	13.49	0.00	1.02	0.00
36	ER12a	ExonRegion	0	40.70	122.97	48.33	177.58	30.49	51.52	49.44
37	E12a_E13a	KnownJunction	0	57.93	136.11	79.60	234.66	34.72	74.99	53.21
38	E12a_E14a	NovelJunction	1	0.62	9.59	3.72	6.88	0.00	0.00	11.75
39	ER13a	ExonRegion	0	53.72	123.57	53.28	201.10	37.21	58.45	42.19
40	E13a_E14a	KnownJunction	0	43.84	95.02	30.01	148.08	28.59	35.19	30.08
41	ER14a	ExonRegion	0	61.39	110.76	75.63	163.78	62.64	46.17	58.14
42	IG31_AR1	ActiveIntergenicRegion	0	85.90	99.45	84.94	168.39	77.96	60.79	58.92