Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	UPP1	Gene	0	11.95	82.61	30.03	144.23	41.10	173.01	2229.73
2	331803	Transcript	0	0.57	2.75	1.44	2.78	1.45	6.12	23.63
3	341253	Transcript	0	0.00	4.26	0.00	6.45	0.00	4.48	0.00
4	395564	Transcript	0	0	0	0	0	0	0	0
5	395560	Transcript	1	6.93	66.86	27.35	139.74	65.82	177.01	2704.86
6	ER1a	ExonRegion	0	0.66	6.42	2.83	7.21	4.01	4.55	8.73
7	E1_Ab	KnownBoundary	0	0.88	17.55	4.79	17.42	4.70	12.41	19.15
8	ER1b	ExonRegion	0	0.60	8.44	1.87	15.03	2.42	12.90	10.02
9	E1a_E2a	KnownJunction	0	0.00	0.00	0.56	0.00	0.00	0.00	2.92
10	E1a_E2c	KnownJunction	0	0.00	4.26	0.00	6.45	0.00	4.48	0.00
11	E1a_E3a	NovelJunction	0	0.73	2.81	0.82	10.62	0.00	10.53	1.40
12	ER2a	ExonRegion	0	0.00	3.64	0.73	1.01	1.34	6.37	11.52
13	E2_Ac	KnownBoundary	0	0.00	4.89	0.82	0.00	1.18	8.28	12.51
14	E2_Ad	KnownBoundary	0	0.82	29.03	9.21	80.68	61.18	81.63	512.35
15	ER2b	ExonRegion	0	0.36	19.51	5.38	40.34	31.35	48.46	271.19
16	ER2c	ExonRegion	0	0.91	29.49	6.77	65.75	44.62	65.76	334.84
17	ER2d	ExonRegion	0	3.71	59.19	6.87	103.87	16.22	108.67	893.90
18	E2a_E3a	KnownJunction	0	4.02	77.66	16.30	146.02	17.70	171.17	1023.06
19	E2a_E3b	KnownJunction	1	1.74	3.70	0.00	4.44	1.18	18.44	89.47
20	ER3a	ExonRegion	0	6.62	107.43	20.43	197.50	19.19	241.07	2098.98
21	E3_Ab	KnownBoundary	1	12.22	144.26	37.05	250.24	28.22	293.73	3487.55
22	ER3b	ExonRegion	0	12.48	133.56	38.44	242.46	49.05	293.31	2985.13
23	E3a_E4a	KnownJunction	0	16.99	147.91	44.29	223.26	63.14	321.17	2981.77
24	ER4a	ExonRegion	0	16.09	181.39	44.08	281.30	80.59	348.96	4175.08
25	E4a_E5a	KnownJunction	0	18.04	97.89	30.52	128.82	59.75	148.90	2717.55
26	E4a_E6a	NovelJunction	1	4.22	36.67	15.86	134.64	5.30	167.28	203.16
27	E4a_E8a	KnownJunction	0	6.93	66.86	27.35	139.74	65.82	177.01	2704.86
28	I4_SR2	SilentIntronRegion	1	7.09	8.03	11.16	1.72	3.41	2.83	60.00
29	ER5a	ExonRegion	0	22.68	83.78	49.99	108.02	56.22	120.93	2870.12
30	E5_Da	NovelBoundary	1	12.83	8.67	17.49	1.06	2.21	8.90	94.47
31	E5a_E6a	KnownJunction	0	18.24	84.62	44.23	107.36	54.96	126.84	3148.89
32	ER6a	ExonRegion	0	18.43	73.98	32.89	97.46	49.50	112.13	2400.56
33	E6a_E7a	KnownJunction	0	11.82	29.87	30.57	55.32	38.45	73.81	2078.01
34	E6a_E8a	NovelJunction	1	4.82	25.33	15.02	31.32	1.04	50.12	358.13
35	ER7a	ExonRegion	0	15.99	41.48	35.12	71.26	61.00	65.77	2262.54
36	E7_Da	NovelBoundary	1	10.65	5.62	7.79	7.21	11.85	12.01	103.67
37	E7a_E8a	KnownJunction	0	6.16	28.16	20.52	48.49	36.75	57.97	1743.47
38	I7	Intron	1	11.92	18.07	16.24	19.63	17.26	24.21	421.92
39	I7_SR1	SilentIntronRegion	1	8.07	10.26	12.03	5.79	6.60	7.81	80.28
40	I7_AR1	ActiveIntronRegion	1	11.31	5.71	13.06	6.79	12.72	9.11	93.02
41	I7_AR2	ActiveIntronRegion	1	14.97	24.22	21.80	25.76	20.16	30.76	543.61
42	I7_SR3	SilentIntronRegion	0	8.10	21.18	12.12	25.81	13.37	31.19	463.12
43	I7_AR3	ActiveIntronRegion	0	15.86	19.06	17.19	23.55	29.33	33.53	687.99
44	I7_SR4	SilentIntronRegion	1	11.14	6.59	10.28	9.26	24.62	18.60	341.46
45	I7_AR5	ActiveIntronRegion	0	7.91	14.23	8.03	12.93	14.51	19.21	306.21
46	ER8a	ExonRegion	0	33.90	219.10	91.57	432.46	118.13	542.10	6990.42
47	E8a_E9a	KnownJunction	0	29.87	212.54	72.11	415.79	38.20	584.13	5936.99
48	ER9a	ExonRegion	0	20.61	191.52	55.87	372.86	84.98	416.21	4900.25
49	E9a_E10a	KnownJunction	0	24.02	174.39	55.93	264.46	68.51	311.60	4567.95
50	ER10a	ExonRegion	0	9.26	91.05	25.31	127.06	32.54	182.34	1941.14
51	E10_Da	KnownBoundary	1	6.79	23.78	19.03	23.05	23.63	62.50	856.43
52	E10_Db	KnownBoundary	0	1.03	7.64	6.06	10.32	0.00	10.75	36.42
53	ER10b	ExonRegion	1	6.60	26.83	21.22	26.81	17.95	64.06	739.47
54	ER10c	ExonRegion	0	2.61	3.87	6.16	8.44	1.39	10.94	50.48
55	ER10d	ExonRegion	0	0.43	0.00	3.09	1.25	0.71	1.23	5.52