Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PMS2CL	Gene	0	26.69	27.40	38.48	27.11	33.15	28.12	27.56
2	338780	Transcript	0	15.23	12.95	21.36	14.81	18.01	14.77	10.16
3	ER1a	ExonRegion	0	1.31	0.00	2.25	0.00	32.53	0.00	0.00
4	E1_Da	NovelBoundary	0	97.54	44.79	53.40	64.80	36.01	51.08	84.14
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER2a	ExonRegion	0	0.00	0.00	0.00	0.04	0.01	0.00	0.00
7	E2_Da	NovelBoundary	1	40.17	14.82	19.18	4.39	46.20	7.40	34.83
8	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER3a	ExonRegion	0	0.95	0.00	0.63	0.52	0.70	0.00	0.91
10	E3_Da	NovelBoundary	1	35.33	17.65	17.85	13.22	7.35	10.91	6.88
11	E3a_E4a	KnownJunction	0	3.61	0.00	1.70	0.00	0.88	0.00	2.15
12	I3_AR5	ActiveIntronRegion	0	3.33	7.89	2.00	5.99	0.49	7.32	1.57
13	E4_Aa	NovelBoundary	0	6.69	24.41	11.21	8.13	2.84	15.95	4.21
14	ER4a	ExonRegion	0	6.91	9.61	9.64	7.21	7.52	12.77	4.64
15	E4a_E5a	KnownJunction	0	6.73	4.18	3.41	7.23	8.16	5.71	2.89
16	E4a_E6a	NovelJunction	0	11.17	24.01	16.30	15.12	6.39	13.16	11.49
17	E5_Aa	NovelBoundary	1	2.27	19.26	5.19	8.78	3.94	7.53	15.12
18	ER5a	ExonRegion	0	12.52	11.58	10.41	10.04	14.00	9.34	7.61
19	E5_Da	NovelBoundary	0	19.76	20.33	11.65	10.46	2.24	9.59	14.89
20	E5a_E6a	KnownJunction	0	10.36	11.24	12.60	13.41	5.12	13.32	7.25
21	ER6a	ExonRegion	1	29.57	23.27	32.92	22.74	19.55	27.06	7.12
22	E6a_E7a	KnownJunction	1	45.03	42.66	60.69	35.03	32.41	49.71	6.49
23	E6a_E8a	NovelJunction	1	11.03	19.81	8.26	5.72	7.95	7.80	20.95
24	E7_Aa	NovelBoundary	1	19.98	23.43	28.83	24.30	17.29	21.87	6.28
25	ER7a	ExonRegion	1	34.32	38.93	52.32	53.11	24.65	48.13	12.50
26	E7_Da	NovelBoundary	1	3.79	6.62	3.45	0.00	4.91	4.15	16.67
27	E7a_E8a	KnownJunction	1	34.05	31.53	46.92	60.47	14.78	59.20	7.93
28	ER8a	ExonRegion	1	30.85	53.83	66.12	63.36	29.61	57.82	21.70
29	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER9a	ExonRegion	0	35.14	51.79	52.10	45.40	31.22	45.17	26.92
31	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER10a	ExonRegion	0	34.17	15.75	45.38	18.34	52.67	14.89	24.67
33	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER11a	ExonRegion	0	29.00	3.34	39.13	6.62	49.77	1.41	20.52
35	E11a_E12a	KnownJunction	0	20.03	4.68	28.93	8.10	44.65	0.00	24.29
36	ER12a	ExonRegion	0	14.78	3.08	23.36	4.97	34.59	1.29	15.60
37	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER13a	ExonRegion	0	27.99	14.86	40.37	10.71	39.43	16.13	26.78
39	E13_Da	NovelBoundary	0	46.28	35.68	85.92	22.78	40.60	17.37	50.37
40	E13a_E14a	KnownJunction	0	2.40	0.00	4.12	0.00	0.00	0.00	0.87
41	I13	Intron	1	43.47	20.22	60.02	17.07	38.11	17.61	48.62
42	I13_AR1	ActiveIntronRegion	1	43.53	20.25	60.11	17.09	38.17	17.63	48.69
43	E14_Aa	NovelBoundary	0	1204.36	689.31	767.20	628.38	942.26	516.59	521.25
44	ER14a	ExonRegion	0	31.47	29.39	43.67	32.56	43.93	36.97	53.53