Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MACC1	Gene	0	87.54	354.48	3.39	6.11	42.80	26.12	70.06
2	332878	Transcript	0	22.56	126.70	0.00	1.06	3.53	11.99	8.16
3	400331	Transcript	0	52.63	173.40	1.82	4.21	15.21	11.22	26.24
4	IG43_AR21	ActiveIntergenicRegion	0	26.92	132.68	17.35	16.01	0.41	13.27	7.75
5	IG43_SR20	SilentIntergenicRegion	0	17.32	11.21	14.30	7.53	0.75	1.97	2.19
6	IG43_AR20	ActiveIntergenicRegion	0	12.42	5.87	11.60	3.42	1.10	2.45	0.52
7	IG43_AR19	ActiveIntergenicRegion	0	29.78	18.74	14.81	11.63	3.16	3.55	2.30
8	IG43_AR18	ActiveIntergenicRegion	0	47.43	35.08	14.96	15.65	8.53	8.17	5.23
9	IG43_AR6	ActiveIntergenicRegion	0	2.27	11.40	0.00	0.42	19.53	0.51	3.11
10	IG43_AR5	ActiveIntergenicRegion	0	1.30	10.85	0.17	0.00	27.60	0.31	2.75
11	IG43_AR3	ActiveIntergenicRegion	0	2.47	11.38	0.00	0.00	6.98	0.00	2.78
12	IG43_SR2	SilentIntergenicRegion	0	3.88	7.78	0.00	0.00	0.51	1.75	1.54
13	IG43_AR1	ActiveIntergenicRegion	0	1.29	7.58	0.00	0.00	9.50	3.08	0.18
14	IG43_SR1	SilentIntergenicRegion	0	21.33	70.16	0.00	0.00	1.98	4.16	10.71
15	ER1a	ExonRegion	0	10.09	40.66	0.00	0.00	3.78	1.31	3.15
16	ER1b	ExonRegion	0	60.77	324.59	2.11	4.69	44.74	15.13	31.57
17	E1a_E2a	KnownJunction	0	36.05	184.43	2.36	4.47	4.45	12.33	18.42
18	E1a_E4a	KnownJunction	1	35.03	212.75	0.00	2.11	3.27	22.67	13.17
19	I1_AR7	ActiveIntronRegion	0	13.66	93.74	0.68	2.53	2.72	4.38	6.83
20	ER2a	ExonRegion	0	43.65	151.71	0.95	6.06	8.26	6.24	17.94
21	E2a_E3a	KnownJunction	1	43.41	118.75	0.00	4.50	6.57	4.18	14.58
22	E2a_E4a	NovelJunction	0	61.35	305.93	2.41	0.00	18.93	18.41	42.84
23	ER3a	ExonRegion	0	52.05	152.22	2.46	2.87	11.33	9.59	21.18
24	E3a_E4a	KnownJunction	1	65.99	179.72	2.23	2.74	18.17	14.47	25.41
25	ER4a	ExonRegion	0	194.28	821.97	7.65	7.64	50.81	64.78	92.34
26	E4a_E5a	KnownJunction	0	216.52	912.30	6.94	11.97	79.67	69.36	109.32
27	ER5a	ExonRegion	0	126.63	631.45	4.40	11.10	46.71	43.45	102.42
28	E5a_E6a	KnownJunction	0	126.39	432.53	6.28	12.84	46.13	28.62	92.95
29	ER6a	ExonRegion	0	104.49	520.92	5.89	8.89	47.70	24.07	96.58
30	E6a_E7a	KnownJunction	1	82.67	496.95	7.39	4.25	52.84	14.90	87.03
31	I6_AR2	ActiveIntronRegion	0	5.92	8.04	0.00	0.00	17.96	0.00	1.62
32	I6_AR3	ActiveIntronRegion	0	7.19	27.29	0.00	1.00	12.28	0.00	2.84
33	ER7a	ExonRegion	0	73.12	347.79	3.31	3.75	41.18	23.83	73.26
34	E7_Da	KnownBoundary	0	106.47	358.26	5.09	7.34	52.21	29.88	101.08
35	ER7b	ExonRegion	0	74.64	253.60	2.96	4.61	42.50	20.50	59.89
36	IG42_SR11	SilentIntergenicRegion	0	3.62	13.13	0.25	0.16	4.90	0.83	5.16
37	IG42_AR12	ActiveIntergenicRegion	0	2.62	10.15	0.00	0.00	7.55	0.00	4.45
38	IG42_SR9	SilentIntergenicRegion	0	2.91	11.15	0.29	0.11	18.62	0.71	3.56
39	IG42_AR11	ActiveIntergenicRegion	0	1.87	10.21	0.22	0.21	15.70	1.27	5.36
40	IG42_SR8	SilentIntergenicRegion	0	3.98	9.37	0.16	0.10	5.22	0.56	4.53
41	IG42_AR7	ActiveIntergenicRegion	0	1.58	7.81	0.13	0.00	2.24	0.34	3.70
42	IG42_AR3	ActiveIntergenicRegion	0	0.00	6.43	0.00	0.00	11.56	0.46	2.56