Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	GNA12	Gene	0	66.32	62.48	81.19	59.75	270.91	114.71	138.28
2	275364	Transcript	0	23.95	60.28	38.10	39.68	118.98	100.24	66.21
3	407904	Transcript	0	0.00	0.30	0.11	0.42	1.15	1.03	0.52
4	407653	Transcript	0	2.46	1.76	1.57	1.40	2.73	1.39	1.86
5	396960	Transcript	0	0	0	0	0	0	0	0
6	IG30_AR4	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	9.32	0.00	0.47
7	IG30_AR3	ActiveIntergenicRegion	0	10.17	2.16	0.96	0.00	0.13	0.00	0.00
8	ER1a	ExonRegion	0	16.49	34.49	19.52	24.29	74.46	54.34	42.88
9	E1a_E4a	KnownJunction	0	37.20	140.08	69.34	88.45	208.44	233.80	129.14
10	ER2a	ExonRegion	0	0.00	1.21	0.40	0.49	3.97	0.00	0.27
11	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER3a	ExonRegion	0	0.01	0.00	0.02	1.18	0.62	1.51	1.08
13	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.63	0.75
14	ER4a	ExonRegion	0	63.77	135.66	96.56	98.03	291.78	228.75	178.65
15	E4a_E6a	KnownJunction	0	69.36	93.45	107.15	70.22	371.57	177.52	156.93
16	E4a_E7a	NovelJunction	1	2.65	10.14	3.74	16.23	2.14	42.83	1.75
17	ER5a	ExonRegion	0	2.46	1.76	1.57	1.40	2.73	1.39	1.86
18	E5_Ab	KnownBoundary	0	6.16	0.00	4.61	2.76	5.79	0.00	4.31
19	ER5b	ExonRegion	0	4.73	2.28	2.57	1.28	4.32	0.00	2.44
20	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER6a	ExonRegion	0	61.75	91.61	112.15	82.28	353.21	159.69	174.73
22	E6a_E7a	KnownJunction	0	47.83	73.82	103.60	85.66	339.80	135.10	182.34
23	ER7a	ExonRegion	0	122.81	111.51	152.49	106.47	485.13	195.46	271.98
24	E7_Da	KnownBoundary	0	44.88	55.06	65.96	50.23	272.58	133.65	129.47
25	ER7b	ExonRegion	0	68.52	53.42	75.62	60.44	295.54	120.62	111.23
26	E7_Db	KnownBoundary	1	17.04	6.54	34.60	17.80	73.31	26.21	29.58
27	E7_Dc	KnownBoundary	0	13.08	12.08	17.89	3.82	55.60	7.45	26.24
28	ER7c	ExonRegion	0	37.04	17.98	57.44	24.44	152.90	45.36	60.17
29	ER7d	ExonRegion	0	18.15	6.26	25.43	6.30	74.03	12.58	26.61
30	IG29	Intergenic	0	3.66	2.54	2.58	2.65	27.15	3.58	10.89
31	IG29_SR9	SilentIntergenicRegion	0	0.74	0.00	3.88	0.00	53.11	0.00	1.35
32	IG29_AR10	ActiveIntergenicRegion	0	0.77	0.00	2.03	0.00	10.63	0.00	0.59
33	IG29_SR8	SilentIntergenicRegion	0	5.48	1.58	1.57	0.81	22.73	1.57	10.04
34	IG29_AR9	ActiveIntergenicRegion	0	5.81	4.05	4.39	6.22	61.39	8.14	22.62
35	IG29_SR7	SilentIntergenicRegion	0	7.64	4.70	6.17	5.74	62.72	7.65	24.61
36	IG29_AR8	ActiveIntergenicRegion	0	6.62	4.77	4.53	4.09	60.93	6.32	23.71
37	IG29_AR7	ActiveIntergenicRegion	0	0.00	0.00	2.18	1.07	24.91	1.09	7.71
38	IG29_SR6	SilentIntergenicRegion	0	3.76	0.78	5.46	1.59	30.62	1.54	8.14
39	IG29_AR6	ActiveIntergenicRegion	0	5.83	5.28	3.32	4.47	39.69	13.66	26.02