Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NUPL2	Gene	0	49.05	39.71	86.75	38.46	95.09	46.87	71.69
2	258742	Transcript	0	67.55	38.20	113.01	43.77	135.99	53.01	69.26
3	410002	Transcript	0	3.14	0.49	4.37	1.75	3.84	1.49	3.81
4	275437	Transcript	0	7.49	6.38	6.57	5.17	12.62	6.27	18.67
5	ER1a	ExonRegion	0	3.23	1.24	4.44	2.78	8.25	8.21	3.71
6	E1_Ab	KnownBoundary	0	2.90	6.33	11.44	6.18	45.25	14.23	12.53
7	E1_Ac	KnownBoundary	1	41.91	40.14	53.70	53.59	98.07	40.33	89.14
8	ER1b	ExonRegion	0	30.62	27.72	42.62	39.72	79.85	36.01	62.99
9	ER1c	ExonRegion	0	31.48	43.63	43.42	42.35	68.28	32.93	59.01
10	E1a_E2a	KnownJunction	1	23.82	65.26	34.99	54.67	24.34	27.58	70.51
11	ER2a	ExonRegion	0	60.08	65.43	100.47	52.26	123.17	60.70	105.54
12	E2a_E3a	KnownJunction	0	71.25	63.03	144.16	52.29	115.49	84.34	100.85
13	ER3a	ExonRegion	0	84.74	63.89	154.10	52.84	157.90	78.43	107.15
14	E3_Da	NovelBoundary	0	15.72	6.54	19.63	8.24	14.78	4.02	18.36
15	E3a_E4a	KnownJunction	0	0.93	0.00	0.89	0.00	0.00	0.00	0.00
16	E3a_E5a	KnownJunction	1	111.87	56.98	147.24	22.68	180.83	52.42	85.39
17	E3a_E6a	NovelJunction	1	23.78	21.86	39.48	34.57	27.27	36.85	3.05
18	E3a_E9a	NovelJunction	0	0.00	2.57	3.15	2.28	3.27	8.07	0.75
19	Ix_AR1	ActiveIntronRegion	0	14.36	6.94	15.99	2.91	15.62	2.84	15.35
20	Ix_AR2	ActiveIntronRegion	0	19.29	6.07	10.57	3.74	12.23	3.68	15.31
21	Ix_AR3	ActiveIntronRegion	0	19.87	5.03	9.48	3.74	16.31	2.98	11.76
22	ER4a	ExonRegion	0	5.35	0.99	7.85	3.51	7.68	2.99	7.62
23	E4_Da	NovelBoundary	0	20.76	4.57	23.71	3.77	18.56	5.74	26.33
24	I4	Intron	1	4.83	1.59	6.61	0.23	6.38	1.37	14.96
25	I4_AR1	ActiveIntronRegion	1	4.84	1.59	6.63	0.23	6.39	1.38	15.00
26	E5_Aa	NovelBoundary	1	60.22	4.89	81.48	0.00	7.38	1.50	20.02
27	ER5a	ExonRegion	0	110.32	58.87	175.12	31.77	202.95	55.66	120.38
28	E5a_E6a	KnownJunction	0	84.65	46.61	144.88	31.89	189.19	58.16	103.50
29	ER6a	ExonRegion	0	132.89	66.75	194.42	64.31	214.73	80.90	109.61
30	E6a_E7a	KnownJunction	1	16.06	12.98	13.16	12.33	19.00	12.76	37.61
31	E6a_E9a	KnownJunction	1	111.37	38.30	183.41	65.43	203.58	61.99	76.21
32	ER7a	ExonRegion	1	6.43	6.16	6.54	3.18	18.85	6.07	18.40
33	E7_Da	NovelBoundary	1	4.51	9.96	10.55	4.85	22.13	10.99	35.89
34	E7a_E9a	NovelJunction	1	4.49	2.92	1.52	14.79	5.28	8.68	9.67
35	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER9a	ExonRegion	0	86.44	52.11	150.99	59.33	196.85	74.53	98.32
37	E9a_E10a	KnownJunction	0	86.90	56.38	127.36	45.35	175.43	64.45	85.95
38	ER10a	ExonRegion	0	49.81	42.94	98.83	45.96	95.82	55.90	82.09