Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SNX13	Gene	0	55.09	19.36	68.35	30.22	43.78	30.69	44.84
2	409076	Transcript	0	69.68	30.67	72.61	47.47	46.56	34.08	69.40
3	409604	Transcript	0	0.00	0.00	0.00	0.00	0.81	0.00	0.00
4	409389	Transcript	1	12.14	5.26	16.96	4.00	8.10	5.00	3.27
5	313588	Transcript	0	0	0	0	0	0	0	0
6	242044	Transcript	0	28.65	9.54	47.28	20.88	24.81	17.18	35.01
7	ER1a	ExonRegion	1	4.68	5.41	2.16	1.02	2.43	8.69	5.27
8	ER1b	ExonRegion	0	16.52	24.30	13.84	23.54	10.17	21.84	17.88
9	ER1c	ExonRegion	0	30.22	34.45	34.30	51.23	13.21	39.19	26.28
10	E1a_E3a	KnownJunction	0	72.87	32.45	119.66	57.43	24.92	61.96	61.87
11	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.07
12	ER3a	ExonRegion	0	69.76	41.44	107.88	65.60	50.16	73.95	75.19
13	E3a_E4a	KnownJunction	0	42.69	54.07	68.78	80.65	29.85	71.10	64.98
14	ER4a	ExonRegion	0	76.75	65.71	119.83	92.12	49.91	88.93	80.52
15	E4a_E5a	KnownJunction	0	94.67	70.28	137.44	72.44	51.66	101.84	92.09
16	E5_Aa	NovelBoundary	1	48.50	0.00	52.51	0.00	0.00	0.00	0.00
17	ER5a	ExonRegion	0	121.13	79.51	163.17	102.87	63.99	128.61	121.88
18	E5a_E6a	KnownJunction	0	124.32	90.27	169.94	108.74	50.49	134.16	100.33
19	ER6a	ExonRegion	0	135.02	83.91	198.23	118.00	90.37	146.49	137.29
20	E6a_E7a	KnownJunction	0	8.95	4.49	4.90	3.82	6.27	8.28	12.43
21	E6a_E8a	KnownJunction	0	145.64	65.76	207.32	107.39	82.30	132.31	152.39
22	E7_Aa	NovelBoundary	0	229.52	256.02	163.59	208.09	131.42	228.95	124.54
23	ER7a	ExonRegion	0	2.22	1.35	3.00	0.86	1.91	0.72	1.95
24	ER7b	ExonRegion	0	0.00	0.00	0.00	0.00	0.81	0.00	0.00
25	ER8a	ExonRegion	0	120.75	56.23	184.86	99.74	84.55	98.65	129.58
26	E8a_E9a	KnownJunction	0	117.13	59.69	179.44	81.25	90.11	69.95	110.05
27	ER9a	ExonRegion	0	108.79	59.93	175.53	90.09	81.29	85.17	150.76
28	E9a_E10a	KnownJunction	0	112.39	49.10	171.57	63.96	84.21	51.64	108.96
29	ER10a	ExonRegion	0	119.33	57.64	183.69	70.22	78.95	62.80	126.93
30	E10a_E11a	KnownJunction	0	86.77	51.60	160.72	78.81	78.45	69.22	114.79
31	ER11a	ExonRegion	0	110.75	56.77	175.50	69.25	90.09	67.01	118.74
32	E11a_E12a	KnownJunction	0	147.76	57.51	201.54	70.71	99.17	73.83	113.42
33	ER12a	ExonRegion	0	139.52	59.93	205.45	94.98	112.46	90.65	136.09
34	E12a_E13a	KnownJunction	0	152.83	53.25	209.97	101.70	93.48	85.89	150.95
35	ER13a	ExonRegion	0	190.85	58.63	218.30	109.83	137.47	97.03	158.82
36	E13a_E14a	KnownJunction	0	218.14	53.38	267.33	101.97	159.78	85.68	163.62
37	ER14a	ExonRegion	0	198.70	53.67	231.17	82.90	130.09	68.66	160.05
38	E14a_E15a	KnownJunction	0	164.71	43.95	156.03	72.82	122.87	57.06	121.43
39	ER15a	ExonRegion	0	200.16	44.65	210.45	76.17	139.57	71.90	121.37
40	E15a_E16a	KnownJunction	0	227.80	59.22	229.81	70.44	139.45	94.55	98.27
41	E15a_E17a	NovelJunction	1	5.39	0.00	5.95	21.75	0.00	8.33	0.79
42	ER16a	ExonRegion	0	262.60	64.33	258.96	95.16	172.54	93.54	145.46
43	E16a_E17a	KnownJunction	0	243.87	67.33	228.86	98.94	182.09	85.95	116.97
44	ER17a	ExonRegion	0	233.89	46.96	226.57	100.24	176.16	85.30	136.01
45	E17a_E18a	KnownJunction	0	127.49	27.22	150.64	59.49	112.47	59.42	84.14
46	E17a_E19a	NovelJunction	1	10.30	6.96	19.40	14.20	0.00	5.17	0.00
47	I17_SR2	SilentIntronRegion	0	6.96	5.53	10.80	5.48	3.61	8.51	7.49
48	I17_AR2	ActiveIntronRegion	0	10.68	5.08	10.24	5.67	5.22	8.43	5.74
49	I17_AR3	ActiveIntronRegion	0	11.95	8.50	14.41	5.89	5.60	10.14	5.40
50	I17_AR4	ActiveIntronRegion	0	11.03	10.07	13.64	3.92	5.55	9.81	5.40
51	I17_AR5	ActiveIntronRegion	0	12.29	10.93	13.55	5.17	5.55	6.83	4.72
52	ER18a	ExonRegion	0	145.94	28.93	157.85	62.77	127.53	61.24	111.27
53	E18a_E19a	KnownJunction	0	119.77	21.23	113.24	51.53	140.46	42.34	95.43
54	ER19a	ExonRegion	0	145.62	34.07	149.42	62.83	110.27	52.70	117.33
55	E19a_E20a	KnownJunction	1	13.59	3.10	16.96	5.74	5.23	10.85	5.09
56	E19a_E20b	KnownJunction	0	134.67	55.93	143.07	93.92	90.69	59.47	133.53
57	ER20a	ExonRegion	0	23.19	5.72	25.80	17.02	15.63	13.49	11.88
58	E20_Ab	KnownBoundary	1	23.17	4.10	21.38	20.10	17.36	9.67	9.86
59	ER20b	ExonRegion	0	103.27	46.49	142.34	67.44	101.17	53.45	106.37
60	E20a_E21a	KnownJunction	0	95.65	38.57	135.58	63.58	83.61	45.53	92.62
61	E21_Aa	NovelBoundary	1	39.05	0.00	54.49	1.35	0.00	0.00	1.52
62	ER21a	ExonRegion	0	136.36	32.19	164.48	57.66	109.13	67.60	102.57
63	E21a_E22a	KnownJunction	0	192.38	47.76	194.83	79.49	181.77	100.31	112.39
64	ER22a	ExonRegion	0	174.53	49.23	183.41	79.52	122.48	87.37	120.02
65	E22a_E23a	KnownJunction	0	199.34	39.67	175.03	62.69	109.36	84.61	111.58
66	E22a_E24a	NovelJunction	1	29.32	1.63	19.03	12.41	3.18	14.55	11.15
67	ER23a	ExonRegion	0	181.49	38.52	166.90	62.09	158.41	73.55	121.86
68	E23a_E24a	KnownJunction	0	160.89	36.36	162.08	61.88	141.50	53.36	113.39
69	ER24a	ExonRegion	0	157.04	36.06	150.43	71.16	127.05	60.01	128.80
70	E24_Da	NovelBoundary	1	19.44	4.23	16.61	1.35	0.00	6.16	3.32
71	E24a_E25a	KnownJunction	0	151.08	35.91	140.93	75.96	144.91	55.90	122.96
72	E25_Aa	NovelBoundary	0	5.81	5.46	16.97	7.53	1.96	10.64	1.75
73	ER25a	ExonRegion	0	143.27	50.87	152.22	79.03	141.01	75.17	135.00
74	E25a_E26a	KnownJunction	0	118.85	72.64	144.92	85.66	150.77	90.80	138.94
75	ER26a	ExonRegion	0	107.31	46.45	129.37	78.16	120.93	71.66	132.49
76	E26a_E27a	KnownJunction	0	101.17	33.52	128.04	73.74	135.55	65.10	118.16
77	ER27a	ExonRegion	0	126.43	38.36	170.94	69.68	124.91	61.59	120.94
78	E27_Da	KnownBoundary	1	21.10	6.73	21.81	10.76	13.07	0.00	6.49
79	E27a_E27b	KnownJunction	0	125.16	36.96	171.90	67.97	122.50	63.27	118.26
80	ER27b	ExonRegion	1	12.14	5.26	16.96	4.00	8.10	5.00	3.27
81	E27_Ab	KnownBoundary	0	10.53	14.63	7.82	5.77	16.90	4.88	6.21
82	ER27c	ExonRegion	0	116.88	36.91	145.12	63.05	104.14	70.35	93.83
83	E27_Db	KnownBoundary	1	36.17	3.84	70.23	6.01	21.14	21.95	26.60
84	ER27d	ExonRegion	1	31.44	3.26	57.69	3.07	19.19	16.05	24.59
85	E27_Dc	KnownBoundary	0	29.56	6.96	42.65	5.26	13.60	14.26	22.84
86	ER27e	ExonRegion	0	28.65	9.54	47.28	20.88	24.81	17.18	35.01
87	IG32_AR28	ActiveIntergenicRegion	0	26.73	6.33	35.93	12.14	22.49	17.25	21.97