Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ICA1	Gene	0	86.77	67.45	11.88	6.36	77.31	4.06	23.22
2	407906	Transcript	0	2.94	3.73	0.85	0.38	3.33	0.00	1.44
3	404556	Transcript	0	0	0	0	0	0	0	0
4	406470	Transcript	0	0.01	1.61	0.34	0.06	1.28	0.00	0.00
5	265577	Transcript	1	26.00	11.17	6.31	0.00	17.94	0.00	6.16
6	402384	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	317367	Transcript	0	2.45	10.48	0.00	0.00	0.00	0.00	1.39
8	339809	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	396675	Transcript	0	0	0	0	0	0	0	0
10	401396	Transcript	0	1.13	0.33	0.00	0.00	0.00	0.00	0.00
11	IG34_AR1	ActiveIntergenicRegion	0	2.49	16.24	0.24	0.44	1.70	0.00	1.68
12	ER1a	ExonRegion	0	2.76	1.21	0.99	0.85	4.18	0.00	0.14
13	E1_Ab	KnownBoundary	0	11.68	4.89	3.28	1.68	19.64	0.00	0.62
14	ER1b	ExonRegion	1	39.07	27.25	10.19	3.81	52.31	0.00	2.10
15	E1a_E6a	KnownJunction	0	3.52	37.96	0.00	1.06	15.08	0.00	0.89
16	ER2a	ExonRegion	0	0.02	3.21	0.00	0.11	0.13	0.00	0.00
17	E2_Ab	KnownBoundary	0	0.00	2.84	0.00	0.00	0.00	0.00	0.63
18	ER2b	ExonRegion	1	28.83	9.71	1.17	1.45	7.17	1.16	8.59
19	E2a_E6a	KnownJunction	1	61.82	13.71	3.18	1.25	7.12	2.89	13.47
20	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER5a	ExonRegion	0	0.62	1.00	0.00	0.00	0.00	0.00	0.00
23	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER6a	ExonRegion	0	56.89	59.33	8.13	1.53	30.58	3.38	12.33
25	E6_Ab	NovelBoundary	0	66.94	79.68	12.88	3.06	33.27	3.81	15.35
26	E6a_E7a	KnownJunction	0	87.42	99.83	17.82	5.50	64.09	3.32	22.04
27	E6a_E7b	KnownJunction	0	26.00	11.17	6.31	0.00	17.94	0.00	6.16
28	E6a_E7c	KnownJunction	0	2.77	0.00	0.00	0.00	0.00	0.00	0.00
29	ER6b	ExonRegion	0	92.08	101.85	18.76	4.36	58.09	3.88	24.85
30	E7_Ac	NovelBoundary	0	114.79	94.63	16.93	6.64	105.97	3.22	31.23
31	ER7a	ExonRegion	0	93.94	103.26	17.10	5.30	75.32	2.45	24.62
32	ER7b	ExonRegion	0	134.15	119.31	22.85	6.04	106.82	3.74	33.23
33	ER7c	ExonRegion	0	167.04	154.18	23.74	5.35	158.02	7.55	42.84
34	E7a_E8a	KnownJunction	0	191.65	173.10	29.65	1.27	130.62	13.35	51.66
35	ER8a	ExonRegion	0	181.59	188.20	23.61	3.69	155.91	6.92	54.48
36	E8a_E9a	KnownJunction	0	213.00	209.83	25.92	6.72	179.74	2.63	49.31
37	ER9a	ExonRegion	0	251.76	188.03	34.85	14.43	211.38	11.35	64.78
38	E9a_E10a	KnownJunction	0	222.38	167.82	29.78	13.27	203.93	17.50	69.05
39	ER10a	ExonRegion	0	189.70	162.69	27.59	15.85	195.47	9.66	57.31
40	E10a_E11a	KnownJunction	0	177.05	141.03	24.86	13.03	202.82	9.38	53.08
41	ER11a	ExonRegion	0	171.66	141.42	24.54	16.51	168.45	11.35	60.76
42	E11_Da	NovelBoundary	1	37.44	17.73	5.95	0.00	9.50	0.00	2.44
43	E11a_E12a	KnownJunction	0	122.17	120.11	25.55	18.15	155.70	18.71	58.33
44	E11a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	I11	Intron	1	34.37	8.51	2.18	1.13	8.42	0.14	1.55
46	I11_AR1	ActiveIntronRegion	1	49.64	10.64	3.04	0.58	14.09	0.57	1.76
47	I11_SR1	SilentIntronRegion	0	30.37	8.19	1.90	1.40	6.60	0.00	1.54
48	E12_Aa	NovelBoundary	1	38.05	8.56	2.50	1.11	7.86	0.00	1.71
49	ER12a	ExonRegion	0	192.75	140.60	27.17	12.24	165.71	12.73	66.21
50	E12_Da	KnownBoundary	0	14.25	15.11	1.24	0.00	5.58	1.34	5.47
51	E12a_E13a	KnownJunction	0	197.41	127.89	26.99	18.29	157.24	10.99	59.19
52	ER12b	ExonRegion	0	14.21	13.88	2.10	1.15	6.09	1.03	4.59
53	E12_Db	KnownBoundary	0	60.45	193.57	76.08	256.93	60.21	316.67	35.08
54	E12b_E12b	KnownJunction	0	2.45	10.48	0.00	0.00	0.00	0.00	1.39
55	E12_Ab	KnownBoundary	0	1.17	1.08	0.00	0.00	0.00	0.00	0.72
56	ER12c	ExonRegion	0	0.18	0.40	0.03	0.00	0.00	0.00	0.22
57	ER12d	ExonRegion	0	9.77	11.84	0.46	0.00	6.18	0.00	2.39
58	E12_Dc	KnownBoundary	0	12.05	9.35	2.07	0.00	5.88	0.00	1.43
59	ER12e	ExonRegion	0	5.86	9.56	1.53	0.30	5.81	0.00	3.96
60	ER13a	ExonRegion	0	145.93	101.23	20.40	10.76	134.95	5.98	47.55
61	E13a_E14a	KnownJunction	0	147.87	105.72	22.69	5.85	175.64	4.82	44.10
62	ER14a	ExonRegion	0	150.82	102.05	24.05	6.87	139.17	5.32	43.50
63	E14a_E15a	KnownJunction	0	150.19	101.57	22.83	8.61	123.42	9.17	43.61
64	ER15a	ExonRegion	0	175.95	114.60	20.27	12.19	156.35	9.22	45.28
65	E15a_E16a	KnownJunction	0	125.26	92.08	14.46	15.01	136.33	4.02	30.94
66	ER16a	ExonRegion	0	124.69	113.16	18.26	12.29	144.44	2.01	36.35
67	E16a_E17a	KnownJunction	0	84.92	92.24	14.57	4.69	142.65	1.39	28.85
68	ER17a	ExonRegion	0	169.46	112.99	19.33	14.68	145.20	6.09	38.51
69	E17a_E18a	KnownJunction	0	147.99	102.72	14.83	21.10	99.45	12.44	29.65
70	I17_SR5	SilentIntronRegion	0	7.43	15.03	2.46	0.00	13.86	3.60	1.72
71	ER18a	ExonRegion	0	95.93	68.46	10.98	12.56	79.68	6.19	19.50
72	E18_Da	KnownBoundary	0	19.63	12.08	4.10	4.69	31.26	0.99	3.07
73	E18_Db	KnownBoundary	0	16.47	5.02	1.94	1.52	12.70	0.00	1.23
74	ER18b	ExonRegion	0	39.04	21.62	3.79	6.23	50.05	0.00	7.15
75	ER18c	ExonRegion	0	24.89	12.99	3.79	1.42	17.87	0.99	2.97
76	E18_Dc	KnownBoundary	0	5.71	6.57	0.62	0.00	5.53	0.00	0.60
77	ER18d	ExonRegion	0	5.92	7.74	0.70	1.25	8.10	0.00	0.81
78	E18_Dd	KnownBoundary	0	2.80	7.91	0.57	1.44	6.87	0.00	0.73
79	ER18e	ExonRegion	0	1.29	1.79	0.77	0.40	5.65	0.00	0.20
80	ER18f	ExonRegion	0	0.00	0.00	0.68	0.00	2.43	0.00	0.00