Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 FNDC1 Gene 0 2.39 4.63 12.96 6.74 1.05 22.87 0.00 2 297267 Transcript 0 0.59 2.36 7.61 3.90 0.47 17.46 0.00 3 340366 Transcript 0 0.00 4.76 2.10 1.44 1.18 4.77 0.00 4 329629 Transcript 0 0.58 0.00 3.22 0.00 0.00 0.92 0.00 5 ER1a ExonRegion 0 0.00 0.19 0.00 0.76 0.00 0.71 0.00 6 E1_Ab KnownBoundary 0 0.00 1.60 0.00 3.22 0.00 2.79 0.00 7 ER1b ExonRegion 0 0.36 1.54 0.46 0.96 0.22 5.98 0.00 8 E1a_E2a KnownJunction 0 0.00 0.00 0.85 0.00 0.00 6.62 0.00 9 E1a_E5a KnownJunction 0 0.00 4.76 2.10 1.44 1.18 4.77 0.00 10 ER2a ExonRegion 0 0.20 3.30 1.70 1.94 0.21 13.21 0.00 11 E2a_E3a KnownJunction 0 0.00 0.00 2.28 0.00 0.00 17.23 0.00 12 ER3a ExonRegion 0 0.00 3.23 1.88 0.00 0.47 16.16 0.00 13 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 14.07 0.00 14 ER4a ExonRegion 0 0.00 0.00 1.04 0.96 0.00 12.76 0.00 15 E4a_E5a KnownJunction 0 0.00 0.00 2.31 1.46 0.00 11.71 0.00 16 ER5a ExonRegion 0 1.08 5.90 8.86 3.55 0.66 25.01 0.00 17 E5a_E6a KnownJunction 0 2.34 7.12 7.79 4.82 0.00 29.29 0.00 18 ER6a ExonRegion 0 1.50 8.10 11.21 5.68 0.79 29.19 0.00 19 E6a_E7a KnownJunction 0 2.40 9.04 13.91 6.83 0.92 18.68 0.00 20 ER7a ExonRegion 0 3.12 8.96 12.98 9.43 0.82 26.45 0.00 21 E7a_E8a KnownJunction 0 1.67 10.38 20.58 15.82 0.00 30.04 0.00 22 ER8a ExonRegion 0 3.14 7.30 19.42 9.19 1.48 31.63 0.00 23 E8a_E9a KnownJunction 0 4.14 5.02 30.09 7.42 0.00 30.31 0.00 24 ER9a ExonRegion 0 2.16 5.93 23.25 9.15 0.55 27.00 0.00 25 E9_Da NovelBoundary 0 1.69 2.76 15.10 10.97 0.00 25.06 0.00 26 E9b_E10a KnownJunction 0 0.60 2.63 21.40 11.11 2.14 31.84 0.00 27 ER9b ExonRegion 0 1.77 3.18 19.59 12.13 1.40 33.57 0.00 28 ER10a ExonRegion 0 2.89 6.40 23.23 10.90 1.54 25.20 0.00 29 E10a_E11a KnownJunction 0 0.93 6.80 16.66 6.88 0.00 28.41 0.00 30 ER11a ExonRegion 0 1.31 5.01 8.02 4.54 0.39 15.49 0.00 31 E11_Ab KnownBoundary 0 1.03 2.63 10.53 5.91 0.00 19.16 0.80 32 ER11b ExonRegion 0 1.28 3.98 7.47 9.03 0.57 19.01 0.00 33 E11a_E12a KnownJunction 0 3.71 6.33 14.99 13.44 1.18 18.76 0.00 34 ER12a ExonRegion 0 4.70 9.63 20.36 12.14 0.56 28.96 0.00 35 E12a_E13a KnownJunction 0 3.92 9.33 20.08 6.94 2.31 33.71 0.00 36 ER13a ExonRegion 0 4.48 6.26 31.13 8.72 1.11 39.02 0.00 37 E13a_E14a KnownJunction 0 3.92 8.83 25.68 1.06 0.97 33.12 0.00 38 ER14a ExonRegion 0 1.17 4.45 10.92 6.97 0.77 23.15 0.00 39 E14a_E15a KnownJunction 0 0.63 1.58 10.35 13.38 2.19 25.94 0.00 40 ER15a ExonRegion 0 0.99 3.87 9.50 10.32 1.42 28.78 0.00 41 E15a_E16a KnownJunction 0 0.78 3.55 9.43 6.80 3.16 39.07 0.00 42 ER16a ExonRegion 0 1.77 2.14 16.41 10.04 3.24 27.76 0.00 43 E16a_E17a KnownJunction 0 1.00 3.78 16.66 5.85 2.28 46.60 0.00 44 ER17a ExonRegion 0 2.93 1.56 18.39 7.54 2.82 28.48 0.00 45 E17a_E18a KnownJunction 0 5.82 1.29 24.11 13.52 0.99 29.99 0.00 46 ER18a ExonRegion 0 3.05 2.66 21.83 9.24 1.11 36.78 0.00 47 E18a_E19a KnownJunction 0 6.23 4.26 18.49 7.21 2.12 31.22 0.00 48 ER19a ExonRegion 0 7.77 6.12 25.79 12.50 2.21 31.40 0.00 49 E19a_E20a KnownJunction 0 2.47 1.44 20.32 3.36 2.35 18.30 0.00 50 E20a_E21a KnownJunction 0 3.76 4.60 11.63 11.27 1.01 29.10 0.00 51 ER20a ExonRegion 0 3.89 4.58 18.40 11.01 2.32 29.96 0.00 52 ER21a ExonRegion 0 5.32 6.64 25.23 13.21 1.79 35.27 0.00 53 E21a_E22a KnownJunction 0 7.56 7.54 24.83 9.86 3.00 50.25 0.00 54 ER22a ExonRegion 0 9.51 4.88 24.93 14.96 2.65 43.62 0.00 55 E22a_E23a KnownJunction 0 9.88 4.91 27.20 16.47 1.13 33.71 0.00 56 ER23a ExonRegion 0 5.79 4.05 24.31 9.25 2.56 37.25 0.00 57 ER23b ExonRegion 0 0.58 0.00 3.22 0.00 0.00 0.92 0.00