Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TIAM2	Gene	0	20.15	40.89	13.71	18.75	32.10	9.46	1.71
2	367174	Transcript	0	2.75	4.45	2.11	2.51	1.60	1.56	0.00
3	360366	Transcript	0	0	0	0	0	0	0	0
4	318981	Transcript	0	0	0	0	0	0	0	0
5	275246	Transcript	0	0.23	0.00	0.00	0.00	0.16	0.00	0.00
6	IG7_AR8	ActiveIntergenicRegion	0	13.49	10.78	16.34	26.20	17.16	36.36	12.13
7	IG7_AR14	ActiveIntergenicRegion	0	4.11	3.84	13.06	9.84	7.58	11.54	2.74
8	IG7_AR21	ActiveIntergenicRegion	0	7.69	3.82	17.95	11.33	7.09	12.00	4.28
9	IG7_SR19	SilentIntergenicRegion	0	7.87	1.59	17.20	10.22	3.91	11.33	2.43
10	IG7_AR22	ActiveIntergenicRegion	0	12.99	5.31	31.06	14.12	7.83	32.17	3.81
11	ER1a	ExonRegion	1	12.46	22.88	8.72	9.32	12.53	0.67	0.56
12	E1a_E2a	KnownJunction	0	17.92	29.58	13.77	14.58	13.09	5.01	0.00
13	ER2a	ExonRegion	0	19.25	54.93	16.26	19.56	24.11	9.05	0.36
14	E2_Da	NovelBoundary	0	4.06	13.56	3.77	2.22	6.25	1.05	0.00
15	E2a_E3a	KnownJunction	0	28.11	68.23	13.57	24.79	35.89	11.71	2.18
16	ER3a	ExonRegion	0	14.94	49.02	10.02	14.13	22.87	6.52	0.95
17	E3a_E4a	KnownJunction	0	14.75	51.91	9.21	13.63	10.49	7.37	2.26
18	ER4a	ExonRegion	0	11.01	39.02	11.23	19.14	17.44	6.89	1.27
19	E4a_E5a	KnownJunction	0	18.09	42.53	9.46	21.48	20.77	8.36	1.46
20	ER5a	ExonRegion	0	20.84	38.47	14.44	26.37	27.01	7.97	2.21
21	E5a_E6a	KnownJunction	1	16.52	28.98	9.93	26.74	23.19	4.85	0.60
22	ER6a	ExonRegion	0	16.48	40.74	11.80	17.61	25.11	9.99	2.19
23	E6a_E7a	KnownJunction	0	8.46	27.85	9.11	10.59	26.83	5.28	0.59
24	ER7a	ExonRegion	0	14.44	36.54	11.04	14.25	21.28	8.39	1.00
25	E7a_E8a	KnownJunction	0	16.27	28.77	12.83	12.57	17.47	11.39	0.87
26	ER8a	ExonRegion	0	18.07	34.34	12.49	18.78	38.85	9.44	1.01
27	E8a_E9a	KnownJunction	0	2.84	5.67	2.73	1.35	2.28	3.32	0.00
28	E8a_E10a	KnownJunction	0	19.76	44.56	16.41	23.03	53.94	10.99	0.89
29	ER9a	ExonRegion	0	2.60	4.59	3.01	3.27	1.35	1.36	0.00
30	E9a_E10a	KnownJunction	0	2.82	3.07	0.59	2.90	1.18	0.00	0.00
31	ER10a	ExonRegion	0	33.92	71.82	20.65	29.36	55.67	9.59	1.61
32	E10a_E11a	KnownJunction	0	39.86	86.83	26.96	40.83	75.57	10.16	2.11
33	ER11a	ExonRegion	1	38.72	75.06	22.36	30.72	63.18	6.26	2.18
34	E11a_E12a	KnownJunction	0	45.11	43.27	20.48	22.95	51.41	6.32	4.18
35	ER12a	ExonRegion	0	32.98	55.22	23.67	27.31	55.27	8.44	2.43
36	E12a_E13a	KnownJunction	0	22.60	65.10	21.84	27.28	53.92	7.08	1.45
37	ER13a	ExonRegion	0	21.63	55.10	14.31	27.15	45.32	6.28	1.66
38	E13a_E14a	KnownJunction	1	22.97	47.26	15.39	14.01	31.01	3.78	0.64
39	ER14a	ExonRegion	0	20.00	40.42	14.51	17.21	31.34	11.90	0.23
40	E14a_E15a	KnownJunction	0	15.45	40.77	14.44	19.37	20.59	10.59	0.00
41	ER15a	ExonRegion	0	13.04	40.38	12.73	21.10	21.52	11.94	0.49
42	E15a_E17a	KnownJunction	0	11.57	39.35	3.75	16.23	22.82	14.95	0.00
43	ER16a	ExonRegion	0	0.46	0.00	0.00	0.00	0.32	0.00	0.00
44	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	I16_SR5	SilentIntronRegion	1	9.78	2.62	0.74	0.54	1.38	0.98	0.00
46	ER17a	ExonRegion	0	17.79	39.54	10.71	18.95	27.34	12.61	0.83
47	E17a_E18a	KnownJunction	0	29.06	39.64	15.74	15.58	29.25	20.13	3.45
48	ER18a	ExonRegion	0	24.57	46.23	15.07	22.72	23.57	13.29	2.11
49	E18a_E19a	KnownJunction	0	22.66	47.53	15.39	29.01	13.49	6.78	1.40
50	ER19a	ExonRegion	0	41.93	46.62	26.13	33.97	39.71	9.64	2.77
51	E19a_E20a	KnownJunction	0	38.05	31.45	21.96	36.90	39.60	10.02	1.50
52	ER20a	ExonRegion	0	20.96	30.00	12.07	24.08	25.63	8.55	1.01
53	E20a_E21a	KnownJunction	0	19.76	26.72	10.45	18.61	26.46	9.30	1.55
54	I20_SR3	SilentIntronRegion	0	5.50	0.74	3.97	0.76	9.54	0.00	3.95
55	ER21a	ExonRegion	0	17.06	44.54	8.73	25.80	28.36	8.26	2.44
56	E21a_E22a	KnownJunction	1	14.04	61.92	11.21	28.93	36.17	4.31	1.48
57	I21	Intron	0	4.70	1.37	3.00	1.95	9.31	0.46	1.77
58	I21_AR2	ActiveIntronRegion	0	2.54	1.74	2.29	5.30	8.22	1.26	1.61
59	I21_SR2	SilentIntronRegion	0	5.73	1.99	2.99	2.06	11.30	1.22	1.69
60	I21_AR3	ActiveIntronRegion	0	6.87	1.89	3.83	1.54	11.95	0.00	2.52
61	ER22a	ExonRegion	0	23.98	51.42	17.51	23.93	35.11	9.28	1.90
62	E22a_E23a	KnownJunction	0	22.16	42.66	21.51	17.91	32.30	7.75	0.59
63	I22_SR2	SilentIntronRegion	0	1.71	1.09	2.74	1.19	9.05	0.00	2.10
64	ER23a	ExonRegion	0	22.33	36.00	18.77	14.99	35.94	8.69	2.51
65	E23_Da	NovelBoundary	0	4.21	2.57	3.81	2.84	11.53	1.15	1.78
66	E23a_E24a	KnownJunction	0	19.19	33.89	20.61	10.29	34.49	10.99	1.63
67	ER24a	ExonRegion	0	24.56	40.67	25.95	15.43	42.70	11.93	1.47
68	E24a_E25a	KnownJunction	0	26.30	36.57	28.83	14.63	45.07	10.91	2.28
69	ER25a	ExonRegion	0	23.70	33.00	22.92	13.05	37.46	15.90	1.50
70	E25a_E26a	KnownJunction	0	16.81	36.75	17.53	14.85	42.65	6.54	0.00
71	I25	Intron	0	2.10	0.55	2.47	0.35	13.85	0.11	1.12
72	I25_AR1	ActiveIntronRegion	0	2.23	0.59	2.63	0.37	14.63	0.12	1.19
73	E26_Aa	NovelBoundary	0	3.29	0.00	5.37	0.00	18.21	0.00	0.53
74	ER26a	ExonRegion	0	26.15	41.35	26.62	22.08	53.88	23.52	1.33
75	E26_Da	NovelBoundary	0	4.36	0.00	0.55	0.00	18.00	0.00	2.19
76	E26a_E27a	KnownJunction	0	21.80	60.61	35.21	25.87	47.30	22.14	1.66
77	I26	Intron	0	3.60	0.78	2.89	0.27	14.30	0.53	0.29
78	I26_AR1	ActiveIntronRegion	0	3.62	0.78	2.90	0.27	14.38	0.54	0.29
79	E27_Aa	NovelBoundary	0	6.49	1.10	3.52	1.63	14.06	1.13	1.49
80	ER27a	ExonRegion	0	27.81	54.21	28.39	26.71	63.35	13.28	1.94
81	E27_Da	NovelBoundary	0	12.23	3.94	3.88	0.00	20.72	0.00	2.82
82	E27a_E28a	KnownJunction	0	17.59	41.06	23.02	22.27	53.34	17.66	1.66
83	I27	Intron	0	7.39	0.60	3.28	0.61	23.43	0.69	1.84
84	I27_AR1	ActiveIntronRegion	0	7.51	0.50	2.67	0.00	24.49	0.00	1.38
85	I27_SR1	SilentIntronRegion	0	11.21	0.37	4.33	1.06	27.33	0.00	2.20
86	I27_AR2	ActiveIntronRegion	0	5.93	0.71	3.07	0.62	21.71	1.14	1.84
87	E28_Aa	NovelBoundary	0	8.38	2.81	4.58	3.09	20.06	0.00	4.13
88	ER28a	ExonRegion	0	25.89	31.27	13.77	18.87	43.52	12.96	3.34