Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FAM54A	Gene	0	27.84	23.53	13.49	46.91	65.26	80.26	13.76
2	275229	Transcript	0	24.37	19.64	12.29	20.29	53.72	41.95	7.77
3	367784	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	IG2	Intergenic	0	22.10	11.60	11.39	13.78	6.92	16.34	7.11
5	IG2_AR3	ActiveIntergenicRegion	0	58.16	29.87	32.79	28.84	35.21	24.10	17.92
6	IG2_SR2	SilentIntergenicRegion	0	64.46	24.96	23.35	15.85	24.61	20.93	14.38
7	IG2_AR2	ActiveIntergenicRegion	0	49.68	29.38	22.19	18.43	19.11	31.27	14.76
8	IG2_SR1	SilentIntergenicRegion	0	10.78	5.36	6.13	10.82	0.30	12.30	3.99
9	ER1a	ExonRegion	0	2.07	5.34	1.62	3.46	19.05	5.08	0.27
10	E1a_E2a	KnownJunction	0	7.11	12.74	5.75	12.43	51.09	14.79	0.64
11	I1	Intron	0	6.41	4.76	3.24	12.52	6.04	13.00	3.61
12	I1_AR1	ActiveIntronRegion	0	2.98	4.99	1.46	11.19	15.80	14.04	2.50
13	I1_SR1	SilentIntronRegion	0	8.39	4.66	4.27	13.35	0.50	12.47	4.26
14	E2_Aa	NovelBoundary	0	9.05	4.36	7.42	9.62	0.00	18.47	7.57
15	ER2a	ExonRegion	1	13.85	13.47	10.76	17.12	48.84	18.79	5.24
16	E2_Ab	KnownBoundary	0	22.90	13.35	15.51	24.90	23.01	26.56	8.71
17	ER2b	ExonRegion	0	16.74	13.58	10.58	23.57	45.10	36.36	9.02
18	E2a_E3a	KnownJunction	0	13.85	13.48	8.81	17.34	55.26	42.48	8.80
19	ER3a	ExonRegion	1	37.67	19.85	13.48	39.05	89.92	56.14	9.23
20	E3a_E4a	KnownJunction	1	42.13	19.97	15.19	31.56	122.32	67.03	10.06
21	ER4a	ExonRegion	0	45.05	30.16	16.48	39.42	101.22	75.28	14.45
22	E4a_E5a	KnownJunction	0	48.98	35.18	21.63	31.83	65.84	86.03	16.04
23	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E5_Ab	NovelBoundary	0	39.24	23.80	18.48	24.03	81.31	62.74	10.88
25	ER5a	ExonRegion	0	49.83	31.46	21.68	36.62	83.80	85.05	16.69
26	ER5b	ExonRegion	0	29.56	25.30	17.49	30.45	91.00	62.39	17.15
27	E5_Da	NovelBoundary	0	11.20	2.71	4.56	2.79	4.59	6.22	1.73
28	E5a_E6a	KnownJunction	0	8.16	17.94	7.65	18.23	110.10	22.30	6.09
29	I5	Intron	1	11.61	2.63	6.16	14.62	3.21	17.97	1.72
30	I5_SR1	SilentIntronRegion	0	7.91	2.63	4.02	11.62	2.52	13.68	1.43
31	I5_AR1	ActiveIntronRegion	1	16.90	2.63	9.21	18.93	4.19	24.12	2.14
32	E6_Aa	NovelBoundary	1	21.66	7.72	12.85	32.81	7.63	51.91	7.85
33	ER6a	ExonRegion	0	28.25	25.90	15.95	65.21	76.91	93.29	17.54
34	E6a_E7a	KnownJunction	0	33.11	15.53	12.53	52.50	52.54	92.27	9.09
35	ER7a	ExonRegion	0	36.41	28.58	16.68	63.54	62.46	110.25	15.52
36	E7a_E8a	KnownJunction	0	33.78	34.31	13.87	63.10	55.79	113.42	18.23
37	ER8a	ExonRegion	0	20.27	21.94	8.27	50.12	32.43	98.84	12.01