Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 MDN1 Gene 0 57.08 46.72 142.15 112.07 177.04 29.33 33.39 2 369393 Transcript 0 23.68 31.68 85.40 70.06 50.32 11.80 13.00 3 369357 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 4.09 13.60 15.06 26.87 11.65 13.12 3.54 5 E1a_E2a KnownJunction 0 16.14 25.96 63.85 56.21 26.67 23.45 10.76 6 ER2a ExonRegion 0 21.82 41.83 68.13 91.18 39.57 25.83 15.99 7 E2a_E3a KnownJunction 0 26.40 42.06 71.56 78.92 55.35 23.74 16.54 8 ER3a ExonRegion 0 23.12 34.85 81.55 80.84 37.11 19.13 19.78 9 E3a_E4a KnownJunction 0 19.59 28.66 89.44 85.17 44.42 16.91 18.17 10 ER4a ExonRegion 0 22.07 35.70 73.41 80.13 39.01 15.39 22.80 11 E4a_E5a KnownJunction 1 19.54 34.47 78.43 76.97 40.60 8.47 17.38 12 ER5a ExonRegion 0 19.91 24.89 59.22 61.33 31.76 9.68 15.78 13 E5a_E6a KnownJunction 0 15.64 13.40 47.36 54.64 31.37 10.08 13.99 14 ER6a ExonRegion 0 20.56 33.83 66.74 71.46 39.28 15.01 17.61 15 E6a_E7a KnownJunction 0 20.65 37.44 90.46 72.28 43.55 14.82 11.14 16 ER7a ExonRegion 0 13.51 28.43 60.92 72.58 34.33 14.02 15.76 17 E7a_E8a KnownJunction 1 16.31 30.26 72.50 85.93 49.26 5.49 10.72 18 E7a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER8a ExonRegion 0 16.82 26.15 79.84 62.46 48.45 9.29 15.79 20 E8a_E9a KnownJunction 1 25.52 27.11 90.22 68.08 50.51 12.73 9.96 21 ER9a ExonRegion 0 27.46 33.50 96.38 71.38 50.57 16.88 14.47 22 E9a_E10a KnownJunction 0 32.28 41.38 88.09 62.47 52.81 14.63 14.07 23 ER10a ExonRegion 0 32.44 33.34 109.00 66.92 47.29 15.87 15.99 24 E10a_E11a KnownJunction 1 45.85 25.69 112.97 45.05 36.31 12.01 12.48 25 ER11a ExonRegion 0 27.05 21.20 98.77 48.66 52.73 14.40 16.27 26 E11a_E12a KnownJunction 1 9.71 17.44 83.10 53.50 50.30 11.39 13.70 27 ER12a ExonRegion 0 28.70 30.27 117.94 56.01 48.57 15.22 19.21 28 E12a_E13a KnownJunction 0 39.56 29.42 109.19 45.89 49.68 16.11 25.71 29 ER13a ExonRegion 0 21.95 23.83 91.98 64.95 51.98 13.21 18.85 30 E13a_E14a KnownJunction 0 22.50 22.33 78.78 53.07 46.38 16.27 15.18 31 ER14a ExonRegion 0 25.16 23.68 77.64 63.93 49.41 9.71 17.82 32 E14a_E15a KnownJunction 0 27.19 24.12 70.99 55.59 45.44 13.75 13.14 33 ER15a ExonRegion 0 28.04 24.60 89.05 63.35 52.99 14.31 17.40 34 E15a_E16a KnownJunction 0 31.53 23.09 95.43 71.87 70.50 9.65 20.11 35 ER16a ExonRegion 0 52.26 30.31 128.18 84.02 94.05 11.49 27.13 36 E16a_E17a KnownJunction 0 63.19 36.94 154.62 105.14 109.89 15.65 23.90 37 ER17a ExonRegion 1 99.96 42.16 202.00 113.57 139.02 24.33 28.66 38 E17a_E18a KnownJunction 1 114.63 36.83 210.65 128.41 99.61 27.20 27.95 39 ER18a ExonRegion 0 64.39 31.39 149.65 82.11 89.31 16.55 21.22 40 E18a_E19a KnownJunction 1 67.38 33.08 111.20 65.67 77.62 13.69 15.62 41 E19_Aa NovelBoundary 1 23.52 0.00 41.13 0.00 0.00 0.00 1.53 42 ER19a ExonRegion 0 42.81 28.29 107.24 65.28 72.80 16.18 20.56 43 E19a_E20a KnownJunction 0 24.62 34.18 89.58 60.28 57.47 15.49 14.78 44 E20_Aa NovelBoundary 1 12.27 0.00 40.05 0.00 1.18 0.00 0.00 45 ER20a ExonRegion 0 37.81 31.65 100.95 69.02 55.94 15.57 17.69 46 E20a_E21a KnownJunction 0 33.36 27.30 97.85 61.74 57.52 13.40 16.11 47 ER21a ExonRegion 0 32.53 29.10 84.48 65.34 53.76 13.97 20.66 48 E21a_E22a KnownJunction 0 41.09 23.28 105.67 75.37 57.19 12.09 13.77 49 ER22a ExonRegion 0 29.81 29.32 79.39 63.46 56.19 12.35 18.64 50 E22a_E23a KnownJunction 0 23.22 20.78 49.23 60.14 53.41 9.89 17.66 51 ER23a ExonRegion 0 30.30 36.41 63.95 61.83 65.04 13.53 16.42 52 E23a_E24a KnownJunction 0 30.09 30.63 73.42 59.84 76.05 11.07 15.94 53 ER24a ExonRegion 0 33.41 30.55 96.42 62.89 78.42 17.05 20.17 54 E24a_E25a KnownJunction 0 53.47 22.33 125.54 54.78 70.73 24.55 20.21 55 ER25a ExonRegion 0 49.99 26.79 141.16 59.15 89.76 20.31 19.79 56 E25a_E26a KnownJunction 1 43.56 22.28 117.41 62.77 64.82 17.21 11.82 57 ER26a ExonRegion 0 49.50 22.36 112.50 75.23 89.78 17.61 16.74 58 E26a_E27a KnownJunction 0 50.82 29.16 104.29 78.86 77.57 20.13 16.11 59 ER27a ExonRegion 0 58.59 30.53 103.97 62.76 83.32 14.72 18.56 60 E27a_E28a KnownJunction 0 60.67 33.05 99.62 50.06 116.72 17.34 20.65 61 ER28a ExonRegion 0 66.44 21.97 132.02 67.72 105.75 10.21 22.50 62 E28a_E29a KnownJunction 1 77.84 26.46 131.23 77.16 93.18 7.53 22.24 63 ER29a ExonRegion 1 51.51 17.49 116.02 66.55 97.46 5.35 19.10 64 E29a_E30a KnownJunction 1 61.00 16.08 103.05 70.19 75.71 5.47 15.18 65 ER30a ExonRegion 0 52.46 21.99 99.29 55.59 81.63 11.36 21.09 66 E30a_E31a KnownJunction 1 66.11 17.81 106.81 47.63 114.37 8.04 14.96 67 ER31a ExonRegion 1 65.42 23.10 122.20 60.52 95.17 8.84 18.21 68 E31a_E32a KnownJunction 0 54.26 22.36 119.85 53.42 51.87 12.70 17.36 69 ER32a ExonRegion 0 66.36 26.73 132.75 56.81 79.43 8.82 24.68 70 E32a_E33a KnownJunction 0 38.27 20.52 105.05 56.70 69.27 10.29 19.05 71 ER33a ExonRegion 0 34.83 15.41 86.12 55.13 66.14 12.05 19.40 72 E33a_E34a KnownJunction 0 32.06 14.42 85.24 68.11 77.39 17.58 18.54 73 ER34a ExonRegion 0 43.24 28.84 108.24 64.34 79.51 16.79 18.91 74 E34a_E35a KnownJunction 1 44.66 33.02 107.48 51.34 99.82 17.23 11.52 75 ER35a ExonRegion 0 48.17 27.93 112.01 73.33 76.22 13.36 19.99 76 E35a_E36a KnownJunction 1 46.92 27.45 100.97 70.95 65.86 14.23 10.63 77 ER36a ExonRegion 1 61.97 33.59 113.95 76.54 92.94 11.83 17.41 78 E36a_E37a KnownJunction 0 65.07 40.77 121.23 74.12 85.94 21.17 19.08 79 ER37a ExonRegion 1 53.87 34.41 100.29 62.28 92.05 12.97 14.47 80 E37a_E38a KnownJunction 1 48.87 17.50 81.80 34.65 118.95 8.92 13.57 81 ER38a ExonRegion 0 50.31 37.88 111.02 84.03 94.29 13.46 21.04 82 E38a_E39a KnownJunction 0 46.41 30.58 122.91 81.57 89.40 13.99 22.76 83 ER39a ExonRegion 0 37.45 33.31 114.83 90.73 80.49 13.95 21.96 84 E39a_E40a KnownJunction 1 45.50 30.19 131.03 77.37 89.61 19.72 14.23 85 ER40a ExonRegion 0 43.78 31.70 135.49 81.96 74.20 18.79 22.08 86 E40a_E41a KnownJunction 0 36.32 38.15 130.55 101.05 114.32 16.83 22.96 87 I40 Intron 1 146.09 599.74 177.80 677.43 753.77 404.93 604.22 88 I40_SR1 SilentIntronRegion 1 146.21 600.23 177.94 677.98 754.39 405.26 604.72 89 ER41a ExonRegion 0 53.59 46.22 138.40 108.35 125.14 20.09 26.34 90 E41a_E42a KnownJunction 0 52.27 51.05 108.58 119.09 87.62 27.31 28.05 91 E42_Aa NovelBoundary 0 21.61 0.00 42.74 0.00 0.92 0.00 4.63 92 ER42a ExonRegion 0 30.11 46.41 73.17 91.34 81.37 19.04 20.48 93 E42a_E43a KnownJunction 0 25.82 45.32 80.03 91.97 89.15 22.24 19.10 94 ER43a ExonRegion 1 34.47 58.30 111.33 128.56 111.32 16.83 25.00 95 E43a_E44a KnownJunction 1 46.68 59.45 117.74 178.88 134.14 20.82 25.78 96 ER44a ExonRegion 0 42.32 49.38 118.70 123.37 126.50 25.23 30.66 97 E44a_E45a KnownJunction 0 45.11 39.14 95.55 136.43 141.13 30.50 26.53 98 ER45a ExonRegion 0 44.57 46.63 129.06 119.43 135.95 27.03 37.60 99 E45a_E46a KnownJunction 0 49.55 46.82 132.77 107.44 133.06 14.79 35.91 100 ER46a ExonRegion 1 41.34 62.99 129.84 109.63 115.37 16.92 34.82 101 E46a_E47a KnownJunction 0 35.27 52.23 118.41 92.06 98.41 17.96 23.69 102 ER47a ExonRegion 0 35.24 38.64 115.95 99.87 99.10 12.84 27.87 103 E47a_E48a KnownJunction 0 37.19 29.35 126.86 106.58 148.74 22.62 22.73 104 ER48a ExonRegion 0 57.41 50.79 147.50 101.05 127.17 20.81 29.63 105 E48a_E49a KnownJunction 0 82.15 63.47 200.85 116.71 152.79 27.63 34.14 106 ER49a ExonRegion 0 60.87 49.42 155.36 102.82 131.59 28.69 27.14 107 E49a_E50a KnownJunction 0 47.32 32.10 141.30 86.12 71.95 12.49 23.62 108 ER50a ExonRegion 0 48.81 34.54 146.74 81.30 91.73 13.63 28.84 109 E50a_E51a KnownJunction 0 43.49 29.58 130.94 54.75 113.95 14.90 18.39 110 ER51a ExonRegion 0 98.72 39.58 207.11 95.87 165.88 25.37 29.87 111 E51a_E52a KnownJunction 1 147.69 46.24 263.42 127.30 173.63 28.27 29.67 112 ER52a ExonRegion 1 157.48 53.20 247.81 117.60 215.06 25.70 31.90 113 E52a_E53a KnownJunction 1 164.81 51.57 235.44 107.17 263.82 17.47 27.77 114 ER53a ExonRegion 1 123.65 49.29 195.87 104.36 166.50 23.31 26.94 115 E53a_E54a KnownJunction 0 63.91 41.64 132.83 92.33 141.94 21.39 25.41 116 ER54a ExonRegion 0 58.91 35.89 127.36 78.77 109.58 18.73 23.46 117 E54a_E55a KnownJunction 0 41.26 32.16 117.08 78.21 64.29 21.39 20.95 118 ER55a ExonRegion 0 42.87 38.80 113.55 85.57 90.11 24.44 28.84 119 E55a_E56a KnownJunction 0 36.52 40.09 127.01 71.01 105.63 31.06 21.58 120 ER56a ExonRegion 0 78.97 50.27 190.38 107.72 156.29 37.54 39.78 121 E56a_E57a KnownJunction 0 103.03 55.09 225.01 154.74 247.13 34.52 39.44 122 ER57a ExonRegion 0 115.19 71.05 255.13 153.73 225.32 46.17 54.37 123 E57a_E58a KnownJunction 0 88.39 76.27 227.73 149.49 265.85 34.68 55.56 124 ER58a ExonRegion 0 66.71 69.60 211.92 140.31 217.38 44.27 45.32 125 E58a_E59a KnownJunction 0 55.16 58.14 157.25 159.08 162.41 32.24 30.33 126 ER59a ExonRegion 0 47.18 53.98 159.21 126.83 149.23 37.15 35.64 127 E59a_E60a KnownJunction 0 31.33 41.30 103.35 106.82 172.67 27.26 22.29 128 ER60a ExonRegion 0 43.74 52.21 111.51 108.57 115.54 32.01 30.37 129 E60a_E61a KnownJunction 0 41.77 45.32 94.70 93.46 89.05 25.57 21.51 130 ER61a ExonRegion 0 30.06 41.36 84.22 101.51 92.73 26.74 26.59 131 E61a_E62a KnownJunction 0 55.01 73.64 173.08 152.14 183.94 37.20 44.16 132 ER62a ExonRegion 0 43.48 72.94 131.08 155.12 144.09 37.93 41.70 133 E62a_E63a KnownJunction 0 35.95 68.02 104.72 144.96 138.46 38.11 32.72 134 ER63a ExonRegion 0 35.30 59.07 99.96 135.75 118.28 24.19 32.11 135 E63a_E64a KnownJunction 0 30.19 48.52 89.04 133.67 122.89 23.77 30.12 136 ER64a ExonRegion 0 36.24 38.30 113.36 137.32 158.94 29.53 38.60 137 E64a_E65a KnownJunction 0 37.32 34.36 119.17 138.30 236.98 22.81 45.60 138 ER65a ExonRegion 0 55.62 48.47 166.23 133.98 227.37 33.31 59.15 139 E65a_E66a KnownJunction 0 53.49 42.30 165.95 115.90 215.04 29.35 47.55 140 ER66a ExonRegion 0 64.93 47.10 162.57 110.80 230.82 22.77 42.97 141 E66a_E67a KnownJunction 0 83.52 36.89 154.47 77.13 308.26 13.37 30.47 142 ER67a ExonRegion 0 90.86 51.96 191.59 132.84 247.60 30.59 44.71 143 E67a_E68a KnownJunction 0 55.79 64.60 161.90 154.39 230.34 34.46 45.09 144 E68_Aa NovelBoundary 0 3.47 1.50 3.43 4.82 0.00 8.92 0.80 145 ER68a ExonRegion 0 85.81 61.18 211.58 154.77 311.57 29.59 52.33 146 E68a_E69a KnownJunction 0 120.63 47.81 222.17 157.62 403.13 25.16 56.62 147 ER69a ExonRegion 0 83.03 57.02 190.60 139.38 343.75 37.61 53.32 148 E69a_E70a KnownJunction 0 81.03 53.38 191.57 132.64 340.61 34.12 58.39 149 ER70a ExonRegion 0 102.52 52.86 234.50 131.56 278.81 35.50 54.16 150 E70a_E71a KnownJunction 0 109.62 62.71 231.08 113.29 255.47 33.82 51.09 151 ER71a ExonRegion 0 137.95 51.89 283.60 121.67 297.46 31.37 48.63 152 E71a_E72a KnownJunction 0 97.60 37.88 221.69 114.60 237.58 24.71 30.54 153 ER72a ExonRegion 0 93.21 46.51 230.26 107.32 209.80 21.32 42.34 154 E72a_E73a KnownJunction 0 72.57 47.37 188.87 114.41 148.55 17.26 33.85 155 E73_Aa NovelBoundary 1 32.58 0.00 64.38 0.00 0.00 0.00 0.00 156 ER73a ExonRegion 0 50.25 38.83 134.89 107.61 152.30 16.91 33.78 157 E73a_E74a KnownJunction 0 24.82 26.48 67.35 80.00 129.23 14.53 22.74 158 ER74a ExonRegion 0 30.43 36.39 94.15 86.90 148.18 22.09 32.38 159 E74a_E75a KnownJunction 0 31.26 29.71 100.33 79.40 156.64 30.87 35.48 160 E75_Aa NovelBoundary 1 10.51 0.00 40.83 0.00 1.18 1.23 0.69 161 ER75a ExonRegion 0 54.64 46.92 148.06 101.14 206.77 29.64 39.93 162 E75a_E76a KnownJunction 0 79.59 45.87 206.67 101.94 238.50 35.32 43.37 163 ER76a ExonRegion 0 70.83 49.29 182.43 124.70 272.93 38.03 42.10 164 E76a_E77a KnownJunction 0 77.36 44.74 169.18 123.32 228.34 45.32 34.27 165 ER77a ExonRegion 0 67.57 42.88 147.16 131.26 238.75 33.82 43.80 166 E77a_E78a KnownJunction 0 40.82 38.22 102.59 121.26 175.18 28.65 39.00 167 ER78a ExonRegion 0 45.75 44.48 93.88 101.56 209.66 25.48 35.20 168 E78a_E79a KnownJunction 0 33.31 39.83 78.30 87.72 167.62 19.48 36.44 169 ER79a ExonRegion 0 45.08 48.91 117.04 118.11 188.59 29.78 33.85 170 E79a_E80a KnownJunction 0 57.86 46.21 146.39 110.94 218.38 36.37 32.62 171 ER80a ExonRegion 0 59.60 53.76 181.00 117.24 229.58 34.75 39.03 172 E80a_E81a KnownJunction 0 55.59 59.53 179.64 124.56 241.02 46.60 49.72 173 ER81a ExonRegion 0 74.94 54.66 228.07 141.59 288.12 37.99 45.66 174 E81a_E82a KnownJunction 0 73.15 54.41 228.03 142.82 330.44 44.41 45.56 175 ER82a ExonRegion 0 86.41 57.84 211.57 155.74 319.73 41.12 49.90 176 E82a_E83a KnownJunction 0 67.14 55.75 173.11 138.46 314.00 37.52 37.99 177 ER83a ExonRegion 0 58.23 45.57 143.54 122.17 264.94 40.48 41.50 178 E83a_E84a KnownJunction 0 53.36 44.64 138.83 113.92 250.79 37.22 33.74 179 ER84a ExonRegion 0 59.09 52.03 158.92 120.19 272.83 43.30 40.74 180 E84a_E85a KnownJunction 0 72.60 50.78 160.40 119.26 320.02 31.25 40.10 181 ER85a ExonRegion 0 81.39 57.42 227.86 150.04 312.41 48.99 45.67 182 E85_Da NovelBoundary 0 12.18 4.83 21.30 8.97 14.22 1.66 10.43 183 E85a_E86a KnownJunction 0 84.22 52.25 211.92 128.01 303.08 40.12 37.75 184 E85a_E87a NovelJunction 1 3.44 20.78 15.20 29.37 16.37 15.54 22.84 185 ER86a ExonRegion 0 85.32 62.69 242.28 162.69 417.21 51.50 44.06 186 E86a_E87a KnownJunction 0 85.09 57.25 220.61 188.93 423.37 60.35 44.03 187 ER87a ExonRegion 0 97.80 66.59 247.60 194.04 449.25 57.69 52.92 188 E87a_E88a KnownJunction 0 112.81 65.92 252.89 191.48 591.33 48.08 54.98 189 ER88a ExonRegion 0 138.46 78.81 279.89 205.63 452.35 50.08 57.20 190 E88a_E89a KnownJunction 0 114.38 94.42 260.71 195.49 372.37 58.56 54.03 191 ER89a ExonRegion 0 110.94 85.69 223.69 205.62 426.47 62.81 57.60 192 E89a_E90a KnownJunction 0 86.17 89.19 196.70 201.45 335.42 77.93 63.72 193 ER90a ExonRegion 0 84.13 81.65 169.32 187.21 391.91 63.03 48.31 194 E90_Da NovelBoundary 0 20.26 10.72 31.00 32.51 20.59 4.07 6.08 195 E90a_E91a KnownJunction 0 59.88 60.79 112.84 138.38 326.04 47.41 28.94 196 I90 Intron 0 19.88 8.05 49.51 22.01 23.61 5.95 6.32 197 I90_SR1 SilentIntronRegion 0 30.19 7.41 68.22 25.91 28.79 5.38 7.78 198 I90_AR2 ActiveIntronRegion 0 18.05 10.56 49.44 25.00 24.69 8.37 6.97 199 E91_Aa NovelBoundary 0 14.67 13.32 35.81 26.28 10.60 8.33 11.55 200 ER91a ExonRegion 0 59.36 84.05 126.91 176.10 351.36 56.05 40.60 201 E91a_E92a KnownJunction 0 53.12 81.89 101.73 129.17 263.29 37.41 42.46 202 E92_Aa NovelBoundary 1 16.09 2.71 26.17 21.62 27.09 3.83 1.19 203 ER92a ExonRegion 0 56.50 83.87 116.74 177.41 292.69 49.99 52.04 204 E92a_E93a KnownJunction 0 47.57 84.65 101.17 173.74 238.97 46.82 35.69 205 ER93a ExonRegion 0 55.71 74.56 146.14 190.08 319.46 66.53 61.86 206 E93a_E94a KnownJunction 0 42.43 58.22 122.65 167.99 232.21 56.25 39.81 207 ER94a ExonRegion 0 61.23 78.14 174.79 201.81 325.44 68.30 55.83 208 E94a_E95a KnownJunction 0 68.31 75.77 160.20 184.92 332.49 60.59 53.36 209 ER95a ExonRegion 0 58.04 76.21 161.89 181.18 389.61 49.79 56.44 210 E95a_E96a KnownJunction 0 62.05 75.06 173.97 173.65 368.82 61.53 53.23 211 ER96a ExonRegion 0 69.80 75.25 181.14 176.89 398.58 77.82 52.83 212 E96a_E97a KnownJunction 0 64.36 73.11 173.38 170.38 375.02 72.95 57.10 213 ER97a ExonRegion 0 79.16 76.79 225.30 193.18 476.46 67.65 62.49 214 E97a_E98a KnownJunction 0 82.10 63.03 212.08 181.48 429.45 49.66 51.46 215 ER98a ExonRegion 0 97.84 51.62 263.20 175.54 471.59 62.82 61.44 216 E98a_E99a KnownJunction 0 103.28 62.66 292.38 163.74 516.61 75.44 60.74 217 ER99a ExonRegion 0 110.11 72.04 310.77 195.13 489.89 75.65 64.76 218 E99a_E100a KnownJunction 0 107.67 62.87 284.76 203.51 481.44 83.45 65.28 219 ER100a ExonRegion 0 106.39 65.51 274.78 211.59 473.32 79.50 65.65 220 E100a_E101a KnownJunction 0 95.90 60.53 250.55 196.19 504.30 61.96 52.35 221 ER101a ExonRegion 0 96.78 71.26 242.54 178.44 346.30 57.68 56.80 222 E101a_E102a KnownJunction 0 79.49 78.92 225.01 193.57 402.62 45.21 60.42 223 ER102a ExonRegion 0 92.72 55.16 201.64 150.68 390.51 56.60 49.83 224 IG9 Intergenic 0 15.80 14.50 38.36 37.81 79.79 18.94 11.62 225 IG9_AR2 ActiveIntergenicRegion 0 59.41 54.96 148.95 149.50 319.42 72.43 43.38