Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	UBR2	Gene	0	96.51	54.05	103.35	60.19	64.58	39.47	52.72
2	372903	Transcript	0	4.14	1.20	2.32	1.06	4.92	0.61	2.31
3	372899	Transcript	0	9.83	6.56	12.81	8.17	4.43	2.73	12.89
4	372901	Transcript	0	0	0	0	0	0	0	0
5	372883	Transcript	0	5.84	2.75	5.29	5.21	4.03	2.30	2.30
6	ER1a	ExonRegion	0	21.40	35.17	16.91	30.59	9.98	17.66	13.23
7	E1a_E2a	KnownJunction	0	31.48	64.79	51.85	55.67	22.06	34.54	29.18
8	ER2a	ExonRegion	0	69.24	82.34	84.79	81.19	32.37	43.43	38.45
9	E2a_E3a	KnownJunction	0	90.53	64.18	96.51	71.41	63.70	25.78	42.69
10	ER3a	ExonRegion	1	114.29	70.75	125.74	86.44	54.66	23.34	44.48
11	E3a_E4a	KnownJunction	1	126.51	90.14	143.66	100.64	53.04	31.95	35.10
12	ER4a	ExonRegion	0	157.44	119.32	160.40	111.53	67.92	47.98	58.46
13	E4a_E5a	KnownJunction	0	176.58	106.40	168.29	124.10	81.98	45.88	71.16
14	ER5a	ExonRegion	0	134.88	72.20	158.69	89.88	61.91	48.55	63.23
15	E5a_E6a	KnownJunction	0	114.74	46.00	139.15	61.33	64.23	39.74	54.20
16	ER6a	ExonRegion	0	120.41	65.01	152.88	72.64	62.91	40.62	62.88
17	E6a_E7a	KnownJunction	0	112.69	80.68	149.32	75.67	52.61	58.77	64.65
18	ER7a	ExonRegion	0	117.01	74.76	152.53	71.69	50.26	49.82	56.59
19	E7a_E8a	KnownJunction	0	117.51	66.36	154.87	80.27	53.81	37.76	50.76
20	ER8a	ExonRegion	0	116.36	52.38	161.32	78.87	54.70	33.82	57.68
21	E8a_E9a	KnownJunction	1	84.50	51.89	120.39	49.93	36.17	17.07	45.03
22	ER9a	ExonRegion	0	91.14	62.77	125.35	52.51	46.54	29.08	47.72
23	E9a_E10a	KnownJunction	0	94.21	61.63	121.23	54.37	60.84	28.01	56.38
24	ER10a	ExonRegion	0	92.53	55.56	116.43	61.45	47.16	25.43	50.61
25	E10a_E12a	KnownJunction	0	6.74	5.65	14.67	4.61	4.96	4.80	18.04
26	E10a_E13a	KnownJunction	0	59.70	41.96	102.47	51.66	32.32	26.99	33.11
27	ER11a	ExonRegion	0	6.49	1.87	3.63	2.88	4.09	0.94	0.00
28	E11a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER12a	ExonRegion	1	13.75	8.91	15.34	12.90	4.52	1.77	15.23
30	E12a_E15a	KnownJunction	0	9.00	5.12	8.41	7.02	3.80	1.61	5.39
31	ER13a	ExonRegion	0	58.42	35.70	106.40	55.16	36.84	24.66	44.89
32	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	E13a_E15a	KnownJunction	0	59.15	39.35	96.58	54.37	25.34	17.58	34.38
34	ER14a	ExonRegion	0	8.28	2.40	4.64	2.12	9.83	1.22	4.62
35	ER15a	ExonRegion	0	93.12	60.19	139.65	79.55	60.65	37.30	66.31
36	E15a_E16a	KnownJunction	0	92.66	77.11	157.99	99.61	71.86	45.29	59.35
37	ER16a	ExonRegion	0	87.84	92.12	148.60	88.40	58.66	39.86	73.33
38	E16a_E17a	KnownJunction	0	9.60	6.67	5.43	5.31	4.86	3.32	2.41
39	E16a_E18a	KnownJunction	0	93.35	83.91	125.12	75.83	57.66	30.79	65.77
40	ER17a	ExonRegion	0	7.05	3.75	4.61	9.02	8.01	2.53	1.84
41	E17a_E18a	KnownJunction	0	1.82	2.81	2.90	8.26	9.41	1.21	1.48
42	ER18a	ExonRegion	0	109.05	93.09	149.75	84.98	84.64	51.44	87.90
43	E18a_E19a	KnownJunction	0	129.33	82.99	135.66	103.73	79.30	70.59	81.24
44	ER19a	ExonRegion	0	166.63	107.73	194.91	133.68	109.57	74.78	113.89
45	E19a_E20a	KnownJunction	0	181.57	108.61	191.56	127.36	71.05	65.90	93.14
46	E20_Aa	NovelBoundary	1	66.88	0.00	78.03	0.00	0.00	1.21	1.72
47	ER20a	ExonRegion	0	178.74	96.89	210.20	124.37	123.65	63.87	122.94
48	E20a_E21a	KnownJunction	0	160.01	91.82	191.05	102.92	174.10	64.43	111.70
49	ER21a	ExonRegion	0	135.02	83.91	165.52	86.88	94.10	59.76	85.32
50	E21a_E22a	KnownJunction	0	104.10	73.11	139.05	75.34	69.14	52.82	65.75
51	ER22a	ExonRegion	0	116.03	68.00	168.30	80.58	66.79	64.36	76.81
52	E22a_E23a	KnownJunction	0	117.75	72.69	163.66	82.33	60.47	71.80	82.59
53	ER23a	ExonRegion	0	116.75	69.47	163.71	72.68	73.41	52.05	71.29
54	E23a_E24a	KnownJunction	0	97.37	60.16	156.75	65.89	70.33	51.54	66.53
55	ER24a	ExonRegion	0	100.89	63.44	157.83	63.26	62.43	34.48	68.17
56	E24a_E25a	KnownJunction	0	98.45	71.09	135.33	73.88	54.87	29.53	54.63
57	ER25a	ExonRegion	0	97.02	78.19	139.48	66.28	70.13	34.64	63.78
58	E25a_E26a	KnownJunction	0	89.31	87.25	156.39	61.93	62.93	39.61	64.66
59	I25_AR1	ActiveIntronRegion	0	21.75	7.13	18.31	4.41	5.37	1.50	6.71
60	ER26a	ExonRegion	0	99.35	91.46	159.93	83.97	62.69	40.06	71.98
61	E26a_E27a	KnownJunction	0	87.62	81.47	116.49	90.62	62.06	40.87	61.08
62	ER27a	ExonRegion	0	123.63	88.57	153.16	95.05	68.00	49.15	75.19
63	E27a_E28a	KnownJunction	0	132.40	87.59	170.06	119.53	64.04	73.54	91.68
64	ER28a	ExonRegion	0	140.66	88.96	199.80	109.40	98.24	66.35	101.51
65	E28a_E29a	KnownJunction	0	107.23	59.40	145.24	67.38	99.57	38.70	69.24
66	ER29a	ExonRegion	0	115.18	61.65	141.32	75.06	73.62	32.17	73.37
67	E29a_E30a	KnownJunction	0	126.13	52.96	153.35	60.95	78.15	31.52	69.87
68	ER30a	ExonRegion	0	124.91	55.56	159.70	78.03	90.01	34.90	82.27
69	E30a_E31a	KnownJunction	0	108.87	63.60	139.49	102.16	70.84	45.02	63.76
70	ER31a	ExonRegion	0	133.36	65.58	158.97	101.74	86.51	51.28	70.30
71	E31a_E32a	KnownJunction	0	143.55	63.92	163.09	91.22	83.66	51.72	72.45
72	ER32a	ExonRegion	0	102.18	73.88	148.17	99.02	72.57	47.81	64.47
73	E32a_E33a	KnownJunction	0	0.90	0.00	1.28	0.00	0.00	0.00	0.59
74	E32a_E33b	KnownJunction	0	91.21	64.68	129.94	85.80	55.53	42.72	52.50
75	ER33a	ExonRegion	0	11.01	5.67	13.55	7.27	4.86	3.98	6.52
76	ER33b	ExonRegion	0	103.38	68.63	139.58	90.31	75.45	51.55	68.42
77	E33a_E34a	KnownJunction	0	133.57	77.87	132.97	75.50	83.41	46.85	65.64
78	ER34a	ExonRegion	0	155.85	75.18	163.08	71.91	97.98	48.90	75.95
79	E34a_E35a	KnownJunction	0	257.78	86.09	231.66	88.07	142.56	63.03	92.92
80	ER35a	ExonRegion	0	157.09	78.46	189.74	90.59	98.32	54.31	97.91
81	E35_Da	NovelBoundary	0	29.32	3.76	18.64	2.82	12.01	1.39	9.53
82	E35a_E36a	KnownJunction	0	114.09	63.34	136.27	56.00	75.75	27.90	70.90
83	I35	Intron	0	22.02	7.40	23.69	2.70	12.32	2.13	9.83
84	I35_AR1	ActiveIntronRegion	0	21.97	9.29	25.58	3.80	13.02	2.81	11.25
85	I35_AR2	ActiveIntronRegion	0	25.36	2.07	27.57	0.00	21.38	0.00	8.50
86	I35_AR3	ActiveIntronRegion	0	47.11	3.64	38.20	0.00	23.40	0.00	13.36
87	I35_AR4	ActiveIntronRegion	0	35.45	5.11	27.99	0.00	13.72	1.05	9.36
88	E36_Aa	NovelBoundary	1	89.73	15.58	82.03	8.10	4.38	3.35	11.21
89	ER36a	ExonRegion	0	169.44	75.94	177.76	62.83	89.48	44.25	87.84
90	E36a_E37a	KnownJunction	0	90.56	40.41	122.82	27.28	64.48	22.08	63.92
91	E36a_E38a	NovelJunction	1	27.59	18.71	25.22	14.60	2.93	16.11	0.00
92	ER37a	ExonRegion	0	131.15	37.03	128.49	44.42	94.07	27.56	56.98
93	E37a_E38a	KnownJunction	0	157.20	55.06	132.37	62.28	155.28	37.36	60.68
94	ER38a	ExonRegion	0	264.47	81.30	232.93	90.85	127.07	79.08	77.55
95	E38a_E39a	KnownJunction	1	271.61	94.55	258.26	108.42	89.68	90.26	76.79
96	ER39a	ExonRegion	0	247.69	91.99	205.39	89.93	147.99	79.57	88.98
97	E39a_E40a	KnownJunction	0	180.64	69.07	166.51	64.26	118.42	64.24	65.47
98	ER40a	ExonRegion	0	211.51	80.01	179.85	83.59	154.18	66.12	93.68
99	E40a_E41a	KnownJunction	0	193.90	80.08	156.78	105.03	175.59	66.73	113.36
100	ER41a	ExonRegion	0	280.98	106.04	208.54	116.17	197.61	90.52	130.71
101	E41a_E42a	KnownJunction	0	328.22	119.93	237.05	110.34	179.84	89.51	127.65
102	ER42a	ExonRegion	0	265.99	110.11	233.97	118.46	155.74	102.15	144.12
103	E42_Da	NovelBoundary	1	112.06	5.73	106.27	1.57	8.60	1.23	9.76
104	E42a_E43a	KnownJunction	0	196.44	83.02	180.29	112.62	155.58	80.18	110.47
105	E42a_E44a	KnownJunction	0	9.86	1.21	10.95	8.94	1.01	6.41	5.56
106	I42_AR1	ActiveIntronRegion	0	21.81	5.81	19.72	1.66	3.60	2.92	5.19
107	ER43a	ExonRegion	0	207.47	97.86	162.46	86.29	195.85	75.55	114.28
108	E43a_E44a	KnownJunction	0	326.54	127.36	268.90	100.59	239.86	86.91	155.94
109	ER44a	ExonRegion	0	277.91	113.24	245.18	106.06	152.31	97.04	129.20
110	E44a_E45a	KnownJunction	0	214.82	126.71	169.37	104.00	129.46	97.90	74.02
111	ER45a	ExonRegion	0	305.91	127.32	259.45	140.16	171.61	100.69	117.68
112	E45a_E46a	KnownJunction	0	265.02	112.57	226.10	105.14	156.74	107.95	94.54
113	ER46a	ExonRegion	0	227.99	108.86	197.57	116.12	147.34	83.59	95.93
114	E46a_E47a	KnownJunction	0	117.53	87.38	135.10	98.80	110.82	85.17	91.82
115	E47_Aa	NovelBoundary	1	45.03	1.18	51.37	0.00	0.00	0.00	2.87
116	ER47a	ExonRegion	0	121.67	91.39	150.31	83.79	96.05	77.00	90.67
117	E47a_E48a	KnownJunction	0	126.93	91.84	143.13	66.29	84.21	73.22	75.17
118	ER48a	ExonRegion	0	136.05	83.73	141.07	81.74	105.77	79.45	80.72
119	E48_Da	NovelBoundary	1	26.29	8.38	8.05	1.41	4.52	0.00	6.16
120	E48a_E49a	KnownJunction	0	119.17	76.82	119.55	85.74	107.01	86.56	73.92
121	E49_Aa	NovelBoundary	0	27.64	7.99	14.70	6.96	2.26	0.99	8.50
122	ER49a	ExonRegion	0	94.75	79.14	100.00	76.58	80.29	68.35	67.44
123	E49a_E50a	KnownJunction	0	95.05	74.51	107.30	72.41	116.88	63.17	64.62
124	ER50a	ExonRegion	0	133.45	99.21	136.95	100.51	86.17	83.03	77.35
125	E50a_E51a	KnownJunction	0	74.17	92.61	74.28	105.09	64.11	93.96	48.50
126	ER51a	ExonRegion	0	84.16	58.87	87.47	60.69	51.76	64.10	43.28
127	E51_Da	KnownBoundary	0	55.49	5.20	47.51	7.86	30.31	11.36	23.36
128	ER51b	ExonRegion	0	47.50	22.75	41.43	33.28	45.02	25.02	27.24
129	IG30_AR3	ActiveIntergenicRegion	0	2.23	1.41	2.07	8.54	0.94	18.20	2.11
130	IG30_AR4	ActiveIntergenicRegion	0	0.82	2.84	3.04	6.20	0.80	8.90	1.99