Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	GABBR1	Gene	0	68.40	60.14	92.58	159.26	129.22	90.10	87.83
2	376952	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	377034	Transcript	0	0	0	0	0	0	0	0
4	376977	Transcript	0	0	0	0	0	0	0	0
5	377016	Transcript	0	0	0	0	0	0	0	0
6	376998	Transcript	0	0	0	0	0	0	0	0
7	376997	Transcript	0	0	0	0	0	0	0	0
8	376978	Transcript	0	0	0	0	0	0	0	0
9	355973	Transcript	0	9.77	4.61	6.42	19.95	3.21	14.13	2.37
10	377012	Transcript	0	0	0	0	0	0	0	0
11	377042	Transcript	0	0.13	0.70	0.47	2.31	0.52	0.36	0.16
12	ER1a	ExonRegion	0	1.93	2.67	1.99	4.56	1.98	2.57	2.45
13	E1a_E2b	KnownJunction	0	7.26	11.64	9.23	20.05	7.42	10.26	9.54
14	ER2a	ExonRegion	0	0.35	0.56	0.68	1.44	0.37	0.66	0.47
15	ER2b	ExonRegion	0	7.98	15.58	9.97	33.16	3.56	13.06	14.61
16	E2a_E3a	KnownJunction	1	19.08	31.60	8.31	43.05	7.84	21.49	18.59
17	ER3a	ExonRegion	0	21.87	45.39	20.79	70.53	26.15	36.02	31.71
18	E3a_E4a	KnownJunction	0	27.89	26.72	18.81	72.04	5.53	27.63	28.71
19	E3a_E5a	KnownJunction	0	4.09	3.05	2.40	10.51	8.23	6.27	4.34
20	I3	Intron	1	16.46	9.51	16.79	4.23	37.64	2.65	27.46
21	I3_AR1	ActiveIntronRegion	1	16.23	10.01	16.90	4.32	38.26	2.88	29.01
22	I3_SR1	SilentIntronRegion	0	18.74	5.57	16.33	3.58	33.42	0.81	15.21
23	E4_Aa	NovelBoundary	0	28.56	11.90	20.58	6.77	32.25	3.19	22.16
24	ER4a	ExonRegion	0	29.92	37.71	30.82	55.24	39.71	28.61	33.76
25	E4_Da	NovelBoundary	0	26.97	17.58	27.98	14.22	31.93	8.52	37.56
26	E4a_E5a	KnownJunction	0	2.37	11.82	10.95	20.32	2.97	9.22	6.06
27	I4	Intron	1	44.02	22.64	42.31	23.84	42.66	13.42	48.25
28	I4_AR1	ActiveIntronRegion	1	44.10	22.68	42.38	23.88	42.74	13.44	48.33
29	ER5a	ExonRegion	0	10.17	17.99	14.32	45.31	9.41	27.26	12.30
30	I5	Intron	1	21.02	12.31	15.53	12.23	24.75	4.19	34.83
31	I5_AR1	ActiveIntronRegion	1	21.04	12.32	15.54	12.24	24.77	4.20	34.86
32	ER6a	ExonRegion	1	8.33	8.47	13.41	58.03	9.62	31.73	7.04
33	E6_Ab	KnownBoundary	1	8.50	3.44	20.66	35.90	10.65	28.94	3.90
34	ER6b	ExonRegion	1	7.95	7.36	10.55	33.69	11.56	25.29	6.92
35	E6_Ac	KnownBoundary	1	20.04	9.12	31.73	62.55	15.42	34.52	24.33
36	ER6c	ExonRegion	0	40.30	68.96	57.72	179.48	80.14	96.90	58.95
37	E6a_E7a	KnownJunction	0	108.43	102.30	130.34	291.28	66.30	168.28	133.87
38	E6b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER6d	ExonRegion	0	0.09	0.13	0.38	0.07	0.58	0.14	0.07
40	ER7a	ExonRegion	0	59.90	105.12	92.64	325.00	88.98	157.62	109.88
41	E7a_E8a	KnownJunction	0	95.62	109.16	103.68	302.69	99.15	140.89	102.18
42	ER8a	ExonRegion	0	107.72	103.13	142.68	306.74	153.83	147.26	132.29
43	E8a_E9a	KnownJunction	0	73.45	83.44	118.67	246.83	96.73	109.29	84.27
44	ER9a	ExonRegion	0	103.02	77.14	155.14	224.67	103.29	103.49	108.50
45	E9a_E10a	KnownJunction	0	121.54	57.56	144.47	215.59	81.54	82.33	99.59
46	E9a_E11a	KnownJunction	0	0.00	2.60	0.00	7.40	0.00	2.25	0.00
47	ER10a	ExonRegion	0	93.28	51.54	133.35	201.99	112.14	65.80	82.90
48	E10a_E11a	KnownJunction	0	71.22	48.55	129.32	164.82	120.29	56.95	72.37
49	ER11a	ExonRegion	0	111.56	88.72	168.73	215.66	149.75	110.37	108.67
50	E11a_E12a	KnownJunction	0	182.37	96.92	248.56	248.10	142.84	130.49	137.64
51	ER12a	ExonRegion	0	121.55	75.57	166.51	216.73	187.36	105.32	129.46
52	E12a_E13a	KnownJunction	0	100.11	80.34	126.13	182.92	177.71	85.36	117.27
53	E12a_E14a	NovelJunction	0	1.03	1.63	9.48	9.43	1.15	9.76	1.63
54	ER13a	ExonRegion	0	76.56	73.82	110.25	187.71	154.86	88.69	103.02
55	E13a_E14a	KnownJunction	0	72.85	72.54	106.56	197.17	146.22	91.39	107.97
56	ER14a	ExonRegion	0	101.93	87.86	160.89	217.83	156.35	96.76	133.73
57	E14a_E15a	KnownJunction	0	0.00	4.02	9.27	16.74	4.15	7.13	0.60
58	E14a_E16a	KnownJunction	0	150.26	91.11	197.03	190.78	229.72	92.81	143.76
59	E14a_E17a	NovelJunction	1	4.19	7.96	19.67	36.36	4.24	16.72	10.12
60	ER15a	ExonRegion	0	0.79	4.82	11.27	16.19	11.38	5.80	6.49
61	E15a_E16a	KnownJunction	0	0.00	5.23	4.18	7.42	4.47	0.00	2.28
62	ER16a	ExonRegion	0	85.82	58.50	116.08	158.27	165.84	68.94	98.70
63	E16_Da	NovelBoundary	1	3.47	1.44	25.08	16.09	27.20	1.13	12.67
64	E16a_E17a	KnownJunction	0	31.46	39.12	37.75	122.29	38.91	54.91	36.32
65	I16	Intron	0	5.35	8.45	14.62	15.89	27.51	7.94	12.02
66	I16_SR1	SilentIntronRegion	0	4.51	15.49	16.22	18.35	31.00	11.23	14.69
67	I16_AR4	ActiveIntronRegion	0	7.41	6.05	16.21	17.44	30.99	8.56	11.39
68	ER17a	ExonRegion	0	63.07	63.48	114.22	203.47	110.05	102.18	93.45
69	E17a_E18a	KnownJunction	0	69.55	64.65	129.16	217.89	152.96	127.41	96.32
70	ER18a	ExonRegion	0	66.53	72.82	119.41	231.14	162.76	100.26	109.02
71	E18_Da	KnownBoundary	0	0.00	3.10	5.59	8.97	0.00	0.00	0.89
72	E18a_E19a	KnownJunction	0	82.20	68.65	130.54	191.40	168.77	87.82	132.35
73	E18a_E20a	NovelJunction	1	0.00	1.34	0.00	13.90	0.00	6.81	0.00
74	E18a_E21a	NovelJunction	1	0.70	1.18	6.55	93.36	0.00	34.25	0.82
75	ER18b	ExonRegion	0	0.00	1.53	2.69	5.96	1.11	0.12	1.07
76	E18b_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
77	ER19a	ExonRegion	0	84.94	74.75	127.02	171.90	162.88	94.86	122.42
78	E19a_E20a	KnownJunction	0	93.11	83.65	112.36	157.78	169.90	84.77	102.46
79	E19a_E21a	NovelJunction	0	2.34	4.18	6.81	15.71	2.17	7.02	2.18
80	E19a_E23b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
81	ER20a	ExonRegion	0	94.58	87.64	109.93	181.78	191.90	87.14	129.24
82	E20a_E21a	KnownJunction	0	100.99	112.91	129.32	207.00	202.82	77.80	138.81
83	ER21a	ExonRegion	0	116.68	107.55	142.92	268.16	239.79	124.94	143.20
84	E21_Da	NovelBoundary	1	11.30	5.78	18.52	7.42	13.02	2.39	27.47
85	E21a_E22a	KnownJunction	0	126.96	95.84	155.65	262.35	156.25	137.38	175.80
86	ER22a	ExonRegion	0	77.18	75.95	107.53	224.48	132.32	94.68	109.44
87	E22a_E23a	KnownJunction	0	55.21	56.93	66.09	167.45	111.71	87.42	72.50
88	ER23a	ExonRegion	0	47.23	39.81	59.41	149.95	103.06	77.19	64.59
89	E23_Ab	KnownBoundary	0	34.16	30.24	41.95	103.38	55.70	47.17	35.40
90	ER23b	ExonRegion	0	49.65	35.16	61.68	148.58	73.11	63.34	43.42
91	E23_Da	KnownBoundary	0	14.15	4.28	13.19	39.31	21.88	23.32	14.96
92	E23a_E24a	KnownJunction	0	0.83	0.00	0.00	1.68	1.18	0.00	0.00
93	E23_Db	KnownBoundary	0	1.02	0.00	0.00	0.00	0.00	0.00	0.00
94	E23_Dc	KnownBoundary	1	31.01	14.95	43.30	50.88	26.26	18.33	15.65
95	E23c_E25a	KnownJunction	0	0.00	0.00	0.00	1.52	0.00	1.53	0.00
96	ER23c	ExonRegion	0	56.67	41.31	72.65	156.18	83.41	59.46	45.87
97	ER23d	ExonRegion	0	56.48	38.88	72.82	159.61	86.65	59.46	46.21
98	ER23e	ExonRegion	0	132.48	113.79	183.45	295.69	310.98	197.24	191.50
99	ER23f	ExonRegion	0	1.87	0.00	4.35	1.78	3.93	3.15	2.70
100	ER24a	ExonRegion	0	0.00	0.66	0.23	1.04	0.76	0.00	0.00
101	ER25a	ExonRegion	0	20.97	5.35	5.85	0.29	0.00	9.13	0.07
102	IG22	Intergenic	0	95.29	15.52	20.45	2.34	0.36	9.63	0.00
103	IG22_SR1	SilentIntergenicRegion	0	32.55	2.86	8.59	0.31	0.00	6.22	0.00
104	IG22_AR1	ActiveIntergenicRegion	0	96.73	15.81	20.72	2.39	0.37	9.72	0.00