Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RPP21	Gene	0	52.62	162.11	76.91	154.44	112.67	152.53	105.20
2	376644	Transcript	0	0	0	0	0	0	0	0
3	376645	Transcript	0	2.80	9.27	4.54	14.22	9.01	8.83	4.37
4	376642	Transcript	1	1.11	15.01	4.08	16.21	8.74	12.40	11.22
5	376640	Transcript	0	13.82	60.10	19.53	47.92	28.77	39.58	22.20
6	IG9	Intergenic	0	16.82	20.76	8.00	14.52	4.00	18.65	4.97
7	IG9_SR1	SilentIntergenicRegion	0	17.62	21.62	8.37	15.14	4.18	19.44	5.19
8	ER1a	ExonRegion	1	2.82	19.44	4.29	34.91	11.61	13.08	27.88
9	ER1b	ExonRegion	1	3.59	24.30	6.55	44.47	17.55	15.12	35.08
10	ER1c	ExonRegion	0	53.71	94.54	72.67	140.51	195.96	104.49	120.08
11	E1_Da	KnownBoundary	0	7.36	26.14	12.21	37.44	8.99	37.25	8.64
12	E1a_E1d	KnownJunction	0	64.84	106.19	80.72	167.59	96.50	130.84	145.38
13	ER1d	ExonRegion	0	13.82	60.10	19.53	47.92	28.77	39.58	22.20
14	E1_Ad	KnownBoundary	0	12.80	86.59	22.33	57.19	16.44	43.04	29.71
15	ER1e	ExonRegion	0	37.47	153.34	51.63	145.13	50.63	101.49	74.26
16	E1b_E2a	KnownJunction	0	0.73	2.84	0.66	7.29	1.18	1.18	0.00
17	E1b_E2b	KnownJunction	0	44.96	202.45	54.05	203.07	21.76	164.31	118.09
18	ER2a	ExonRegion	0	4.86	15.70	8.43	21.15	16.84	16.48	8.74
19	ER2b	ExonRegion	0	123.80	234.07	160.22	270.55	164.02	239.04	203.69
20	E2a_E3a	KnownJunction	0	112.34	247.84	137.45	253.11	410.69	244.31	224.27
21	I2	Intron	0	18.16	17.52	15.37	17.74	9.57	13.87	5.87
22	I2_AR1	ActiveIntronRegion	0	18.20	17.56	15.41	17.79	9.60	13.90	5.88
23	E3_Aa	NovelBoundary	0	18.43	30.13	20.02	22.70	6.59	35.86	13.36
24	ER3a	ExonRegion	0	69.00	274.53	108.71	226.72	207.50	257.62	155.10
25	E3a_E4a	KnownJunction	0	75.15	275.56	128.74	319.05	136.89	323.37	205.93
26	E3b_E4a	KnownJunction	1	1.03	21.07	5.86	23.70	10.49	16.72	17.48
27	ER3b	ExonRegion	0	1.54	21.52	5.71	23.69	7.64	14.36	15.52
28	ER4a	ExonRegion	0	39.92	143.91	67.61	124.09	78.49	157.48	86.41
29	ER4b	ExonRegion	0	0.77	2.43	0.68	1.25	8.10	6.13	0.67