Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C6orf48	Gene	0	100.91	512.64	128.35	406.77	316.45	790.43	658.86
2	375641	Transcript	0	3.12	5.48	2.85	10.33	2.74	28.28	1.18
3	375635	Transcript	0	1.69	18.02	1.41	10.65	0.99	9.00	6.28
4	375639	Transcript	0	0	0	0	0	0	0	0
5	375642	Transcript	0	0.00	10.38	0.76	7.15	4.33	10.61	12.22
6	375640	Transcript	0	0	0	0	0	0	0	0
7	375638	Transcript	1	11.65	256.20	35.90	102.86	111.53	182.96	526.31
8	395789	Transcript	0	1.89	6.28	3.59	7.98	8.10	20.07	4.65
9	375637	Transcript	0	0.77	0.00	0.00	0.00	1.62	0.00	0.00
10	375636	Transcript	0	0	0	0	0	0	0	0
11	375633	Transcript	1	24.20	40.35	34.92	58.08	50.88	156.25	28.50
12	395788	Transcript	1	30.35	43.54	53.48	78.49	56.22	198.07	23.06
13	IG36_SR1	SilentIntergenicRegion	0	4.03	4.27	5.51	13.05	0.37	52.49	0.15
14	IG36_AR2	ActiveIntergenicRegion	0	0.88	1.21	0.68	1.25	0.00	11.91	0.00
15	ER1a	ExonRegion	0	6.24	10.97	5.69	20.66	1.17	56.57	0.72
16	E1a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	4.31	0.00	1.63
17	ER2a	ExonRegion	0	0.00	1.21	0.68	3.85	0.00	10.92	0.00
18	E2_Ae	KnownBoundary	0	287.67	641.89	221.85	541.20	1937.66	588.44	1781.27
19	ER2b	ExonRegion	0	1.34	1.21	0.68	7.48	1.01	15.94	0.17
20	ER2c	ExonRegion	0	67.85	143.35	49.38	137.91	390.27	141.48	382.36
21	ER2d	ExonRegion	0	200.18	582.45	161.98	493.49	1379.78	534.23	1496.46
22	ER2e	ExonRegion	0	143.36	675.76	138.29	543.92	891.87	665.09	1320.55
23	E2_Da	KnownBoundary	0	2.15	139.79	4.08	88.07	6.71	165.09	46.35
24	E2a_E2f	KnownJunction	0	3.84	146.78	3.08	117.66	3.37	193.17	19.91
25	E2_Af	KnownBoundary	0	1.03	22.93	0.00	6.56	1.04	25.86	3.35
26	E2_Db	KnownBoundary	0	13.57	397.78	18.58	152.69	39.03	215.63	77.10
27	E2b_E3b	KnownJunction	0	1.69	18.02	1.41	10.65	0.99	9.00	6.28
28	ER2f	ExonRegion	0	4.35	321.94	5.19	166.26	25.65	263.18	53.07
29	ER2g	ExonRegion	0	9.80	425.38	11.55	197.58	27.33	308.52	70.90
30	ER2h	ExonRegion	0	239.66	980.92	221.41	658.66	717.40	1015.55	1712.25
31	E2c_E3b	KnownJunction	0	149.68	848.88	193.55	560.05	2538.76	787.83	1614.66
32	E2c_E5b	KnownJunction	0	0.95	10.01	1.38	7.59	2.81	16.51	1.23
33	ER3a	ExonRegion	0	24.20	40.35	34.92	58.08	50.88	156.25	28.50
34	E3_Ab	KnownBoundary	1	23.10	56.93	37.64	57.76	34.69	277.03	21.04
35	ER3b	ExonRegion	0	165.58	1183.18	263.47	835.56	1375.98	1529.58	1657.96
36	E3a_E4a	KnownJunction	0	0.85	1.63	0.00	0.00	0.00	3.86	1.35
37	E3a_E4b	KnownJunction	0	0.00	10.38	0.76	7.15	4.33	10.61	12.22
38	E3a_E4c	KnownJunction	1	11.65	256.20	35.90	102.86	111.53	182.96	526.31
39	E3a_E5b	KnownJunction	0	119.63	840.24	213.08	801.00	472.33	1470.77	743.74
40	ER3c	ExonRegion	0	0.77	0.00	0.00	0.00	1.62	0.00	0.00
41	ER4a	ExonRegion	0	2.92	10.93	7.18	15.96	16.20	36.29	7.96
42	ER4b	ExonRegion	0	25.95	42.78	31.69	56.36	55.07	151.74	41.92
43	E4_Ac	KnownBoundary	0	27.20	42.03	30.26	70.63	48.69	190.84	39.74
44	ER4c	ExonRegion	1	51.42	348.64	69.33	182.65	137.17	359.39	755.25
45	E4_Da	NovelBoundary	1	29.21	29.58	34.13	39.99	37.71	163.08	9.87
46	E4a_E5b	KnownJunction	1	39.86	349.65	61.09	141.06	134.12	263.44	823.84
47	E5_Aa	NovelBoundary	0	25.52	32.81	35.80	64.50	49.03	171.81	15.95
48	ER5a	ExonRegion	1	30.35	43.54	53.48	78.49	56.22	198.07	23.06
49	E5_Ab	KnownBoundary	1	34.88	58.82	73.30	95.85	52.84	301.15	24.39
50	ER5b	ExonRegion	0	255.86	1537.14	379.80	1236.16	649.89	2259.50	1767.34
51	E5_Da	KnownBoundary	0	256.32	1641.20	328.02	1311.13	571.83	2322.25	1584.48
52	ER5c	ExonRegion	0	228.31	1574.80	320.56	1219.12	621.57	2312.23	1670.05
53	E5b_E6a	KnownJunction	0	195.32	1420.84	300.93	1071.53	807.84	2202.51	1621.80
54	E6_Aa	NovelBoundary	1	32.80	26.30	34.37	78.10	18.53	182.48	2.49
55	ER6a	ExonRegion	0	161.01	931.76	205.57	769.58	374.95	1840.98	880.85
56	ER6b	ExonRegion	0	3.33	7.29	2.71	14.96	2.16	38.82	15.29
57	IG37	Intergenic	0	9.58	5.06	4.94	13.65	1.71	43.89	0.57
58	IG37_SR4	SilentIntergenicRegion	0	5.57	4.04	3.48	9.95	2.45	31.68	0.28
59	IG37_AR3	ActiveIntergenicRegion	0	12.07	5.68	5.28	20.45	0.64	85.78	0.00
60	IG37_SR5	SilentIntergenicRegion	0	13.52	6.00	6.50	16.64	1.22	49.80	1.02
61	IG37_AR4	ActiveIntergenicRegion	0	14.46	8.21	7.97	12.59	1.11	23.09	1.35