Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AGPAT1	Gene	0	51.23	33.48	77.95	87.97	309.92	50.46	248.23
2	336984	Transcript	0	3.37	2.24	1.73	0.48	17.00	0.00	8.09
3	395497	Transcript	0	0.68	0.01	1.69	1.16	1.27	0.77	0.23
4	375104	Transcript	0	0.00	1.59	1.95	0.52	60.21	0.51	5.39
5	395499	Transcript	1	1.91	3.82	44.57	36.21	55.52	11.19	42.49
6	375107	Transcript	0	19.34	16.19	18.30	33.75	96.07	21.62	87.69
7	395496	Transcript	0	0.00	3.84	0.93	0.53	1.39	0.26	0.58
8	ER1a	ExonRegion	0	3.36	3.09	2.79	0.96	32.85	0.00	13.19
9	E1a_E7a	KnownJunction	0	3.39	1.39	0.68	0.00	1.15	0.00	2.98
10	ER2a	ExonRegion	0	1.35	0.03	3.38	2.32	1.52	1.53	0.46
11	E2a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	1.01	0.00	0.00
12	ER3a	ExonRegion	0	0.00	1.65	3.10	1.03	93.63	1.01	5.73
13	E3a_E7a	KnownJunction	0	0.00	1.52	0.80	0.00	26.79	0.00	5.04
14	E4_Aa	NovelBoundary	1	7.84	0.00	47.47	43.73	157.66	11.79	24.19
15	ER4a	ExonRegion	1	2.80	1.55	56.13	41.89	58.58	9.59	44.42
16	E4a_E7a	KnownJunction	1	1.02	6.09	33.01	30.53	52.47	12.78	40.56
17	ER5a	ExonRegion	0	8.88	9.67	7.38	23.93	50.50	11.21	42.41
18	E5a_E7a	KnownJunction	0	29.81	22.70	29.21	43.56	141.64	32.03	132.97
19	ER6a	ExonRegion	0	0.00	3.28	1.14	1.06	2.78	0.52	1.15
20	E6a_E7a	KnownJunction	0	0.00	4.41	0.72	0.00	0.00	0.00	0.00
21	ER7a	ExonRegion	0	44.40	64.06	84.07	143.88	346.72	72.47	313.24
22	E7a_E8a	KnownJunction	0	70.68	76.92	105.72	141.63	535.77	79.70	482.01
23	E7a_E9a	NovelJunction	1	1.72	0.00	4.11	9.59	5.46	10.64	0.89
24	E7a_E10a	NovelJunction	1	0.70	2.00	2.82	12.65	2.05	19.46	6.13
25	ER8a	ExonRegion	0	68.21	74.39	98.81	126.90	449.38	75.66	447.27
26	E8a_E9a	KnownJunction	0	61.15	88.22	92.69	104.41	527.93	74.56	438.14
27	ER9a	ExonRegion	0	73.86	67.33	114.78	134.59	577.16	90.88	487.80
28	E9_Da	NovelBoundary	1	31.19	0.00	35.75	0.00	0.00	0.00	0.00
29	E9a_E10a	KnownJunction	0	91.38	75.37	111.86	148.54	343.26	105.99	559.54
30	ER10a	ExonRegion	0	110.21	91.65	160.50	187.73	643.70	114.62	650.97
31	E10a_E11a	KnownJunction	0	112.02	74.53	165.89	199.53	929.08	105.75	642.64
32	E11_Aa	NovelBoundary	1	38.89	0.00	60.64	4.61	1.18	8.95	1.53
33	ER11a	ExonRegion	0	94.00	86.37	149.87	169.48	737.04	107.30	603.58
34	E11a_E12a	KnownJunction	0	100.42	71.96	148.01	159.89	669.59	113.01	604.81
35	ER12a	ExonRegion	0	99.88	48.94	126.15	137.98	534.82	84.75	404.48
36	ER12b	ExonRegion	1	16.96	0.27	21.12	13.39	35.39	13.03	30.91
37	ER12c	ExonRegion	0	6.92	0.00	7.45	4.99	16.47	2.04	12.14