Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NQO2	Gene	0	18.28	35.84	11.73	8.26	241.66	23.08	34.68
2	380472	Transcript	0	3.58	4.70	1.18	4.02	10.39	7.99	2.15
3	338130	Transcript	0	0	0	0	0	0	0	0
4	397717	Transcript	0	0	0	0	0	0	0	0
5	380441	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	2.28
6	380455	Transcript	0	0	0	0	0	0	0	0
7	380454	Transcript	0	0	0	0	0	0	0	0
8	380430	Transcript	0	0.42	0.66	0.12	0.23	1.25	1.11	0.25
9	ER1a	ExonRegion	0	0.43	0.00	0.80	0.00	5.73	0.81	1.36
10	E1a_E7a	KnownJunction	0	1.47	0.00	0.65	0.00	5.46	2.97	3.15
11	I1_AR3	ActiveIntronRegion	0	2.23	4.99	2.41	3.62	198.58	2.89	6.79
12	E2_Aa	NovelBoundary	0	4.57	10.69	3.82	2.74	104.80	10.37	10.25
13	E2_Ab	NovelBoundary	1	1.03	11.32	1.78	1.68	12.91	0.00	2.67
14	ER2a	ExonRegion	0	0.00	3.19	0.25	0.00	9.67	2.07	0.67
15	ER2b	ExonRegion	0	1.15	7.14	1.27	0.78	21.56	2.45	1.69
16	ER2c	ExonRegion	0	1.54	7.29	1.76	2.74	32.56	3.68	2.83
17	ER2d	ExonRegion	0	5.08	21.31	5.90	9.87	93.57	12.53	16.56
18	E2a_E4a	KnownJunction	0	5.19	3.78	0.89	3.28	15.93	3.78	7.21
19	E2a_E5a	NovelJunction	0	2.65	10.90	0.00	1.14	0.00	9.70	3.47
20	E2a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.28
21	E2a_E7a	KnownJunction	1	7.24	11.72	13.28	10.21	171.49	11.71	32.75
22	ER3a	ExonRegion	0	0.83	1.32	0.25	0.45	1.32	2.22	0.50
23	E3a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	1.18	0.00	0.00
24	ER4a	ExonRegion	0	18.74	24.56	6.68	5.14	54.69	22.81	22.03
25	E4a_E5a	KnownJunction	0	12.65	20.70	5.85	3.41	51.62	20.61	17.51
26	E4a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	22.27	0.00	0.00
27	ER5a	ExonRegion	0	21.22	25.33	7.14	5.15	45.37	29.08	23.30
28	E5_Da	NovelBoundary	1	12.42	43.56	6.67	3.93	31.14	37.33	16.91
29	E5a_E6a	KnownJunction	0	2.77	10.11	2.37	1.57	5.44	5.71	5.04
30	E5a_E7a	NovelJunction	0	2.70	4.44	3.72	4.04	25.80	7.91	12.17
31	I5	Intron	0	9.35	15.37	1.95	3.19	18.67	10.39	8.57
32	I5_AR1	ActiveIntronRegion	1	18.67	33.56	2.76	6.60	38.48	19.67	16.21
33	E6_Aa	NovelBoundary	0	5.69	5.70	2.40	8.13	20.06	9.41	4.70
34	ER6a	ExonRegion	0	6.23	13.67	2.73	3.17	19.65	14.45	12.32
35	E6a_E7a	KnownJunction	1	1.03	16.73	0.89	1.68	12.19	9.54	13.82
36	E7_Aa	NovelBoundary	0	6.66	12.53	0.89	1.16	9.41	2.63	5.30
37	ER7a	ExonRegion	0	27.78	52.32	23.69	18.50	545.26	37.75	69.18
38	E7a_E8a	KnownJunction	0	32.45	55.14	21.04	16.42	813.05	34.65	65.22
39	E7a_E9a	NovelJunction	0	0.00	1.02	0.00	1.00	12.52	0.00	0.00
40	ER8a	ExonRegion	0	37.83	89.44	30.86	23.81	592.86	50.70	90.91
41	E8a_E9a	KnownJunction	0	43.01	90.01	32.65	21.16	746.94	50.22	90.90
42	ER9a	ExonRegion	0	45.29	81.25	34.47	16.37	900.62	49.35	90.57
43	E9_Da	NovelBoundary	1	11.60	2.76	1.60	0.00	41.66	0.00	7.35
44	E9a_E10a	KnownJunction	1	7.18	2.81	0.88	8.26	2.26	15.44	0.00
45	E9a_E10b	KnownJunction	1	36.02	67.47	24.33	4.71	816.49	26.50	85.37
46	E9a_E11a	KnownJunction	0	1.03	6.86	2.40	6.94	129.60	7.85	0.89
47	E9a_E12a	NovelJunction	0	0.68	0.00	0.00	0.00	11.20	3.46	0.66
48	I9_SR1	SilentIntronRegion	0	3.10	7.72	0.90	1.42	21.48	3.54	6.26
49	E10_Aa	NovelBoundary	0	7.23	3.52	4.33	0.00	58.02	9.09	8.60
50	ER10a	ExonRegion	0	5.25	16.00	2.39	7.83	28.11	12.75	4.10
51	E10_Ab	KnownBoundary	0	3.86	12.90	4.08	4.47	22.73	14.34	3.31
52	ER10b	ExonRegion	0	42.24	79.90	27.54	11.76	565.92	43.69	83.03
53	E10b_E11a	KnownJunction	1	43.79	57.51	14.89	4.47	538.28	41.91	72.40
54	ER10c	ExonRegion	0	37.65	64.39	14.23	8.73	502.11	39.23	68.81
55	I10_AR3	ActiveIntronRegion	0	3.73	8.91	1.32	1.55	20.26	6.86	5.17
56	E11_Aa	NovelBoundary	0	6.33	7.96	0.00	4.36	24.99	10.59	7.55
57	ER11a	ExonRegion	0	36.09	79.98	22.41	9.10	730.14	41.14	72.20
58	E11_Da	NovelBoundary	1	10.08	12.11	2.03	1.49	36.82	6.03	17.13
59	E11a_E12a	KnownJunction	0	31.34	71.14	33.25	11.11	822.18	23.24	70.48
60	I11	Intron	0	7.58	7.07	2.62	0.98	35.62	3.58	9.93
61	I11_AR2	ActiveIntronRegion	0	9.11	9.08	1.39	1.10	39.78	2.75	5.91
62	I11_AR3	ActiveIntronRegion	1	7.79	7.02	4.32	1.26	38.72	4.92	16.98
63	E12_Aa	NovelBoundary	0	13.84	2.94	6.83	1.22	42.35	10.48	29.11
64	ER12a	ExonRegion	0	22.31	41.42	14.85	5.68	304.88	18.59	46.86
65	ER12b	ExonRegion	0	0.99	2.08	1.74	0.00	65.37	2.10	4.63
66	IG33	Intergenic	0	2.72	4.87	3.74	0.52	9.30	2.21	6.29
67	IG33_AR3	ActiveIntergenicRegion	0	4.12	7.01	4.45	1.04	12.74	3.37	7.67