Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HNRNPH1	Gene	0	1029.67	833.92	1107.24	1150.83	1134.16	1144.99	411.12
2	329433	Transcript	0	145.17	213.95	125.87	479.40	124.28	475.40	26.87
3	356731	Transcript	0	19.21	20.65	42.68	33.67	59.12	34.33	12.82
4	393432	Transcript	0	0	0	0	0	0	0	0
5	ER1a	ExonRegion	0	0.67	1.63	2.15	1.82	4.07	1.75	1.34
6	E1_Ab	KnownBoundary	0	11.82	23.93	29.49	25.74	58.25	10.02	6.71
7	E1_Da	KnownBoundary	0	666.16	850.04	805.34	1226.47	1002.08	1078.99	327.37
8	ER1b	ExonRegion	0	340.60	386.57	442.58	445.71	999.90	402.37	175.37
9	ER1c	ExonRegion	0	40.21	56.23	40.81	37.55	58.33	44.65	5.99
10	E1_Ac	KnownBoundary	0	62.89	43.30	61.53	42.61	6.36	48.86	12.96
11	ER1d	ExonRegion	0	385.65	854.42	555.62	1038.11	421.82	1033.12	258.10
12	E1b_E2a	KnownJunction	0	634.80	1294.63	1081.40	2000.16	401.49	1987.52	445.99
13	I1	Intron	1	570.80	176.82	488.74	78.06	133.07	59.23	59.63
14	I1_AR2	ActiveIntronRegion	1	588.96	182.45	504.28	80.55	137.31	61.12	61.52
15	E2_Aa	NovelBoundary	1	484.26	206.41	569.88	57.43	108.97	66.09	70.68
16	ER2a	ExonRegion	0	1445.36	1554.33	2235.47	2182.88	1777.59	2184.73	779.38
17	E2_Da	NovelBoundary	1	901.92	323.69	909.51	293.07	177.71	151.90	85.50
18	E2a_E3a	KnownJunction	0	1053.20	1846.20	2081.51	2398.92	1504.50	2390.03	806.84
19	E2a_E4a	NovelJunction	0	580.78	224.38	771.64	273.05	89.21	234.31	73.48
20	I2	Intron	1	668.89	210.05	627.57	214.12	190.24	97.00	62.12
21	I2_AR1	ActiveIntronRegion	1	674.83	211.93	633.13	215.99	191.89	97.88	62.65
22	E3_Aa	NovelBoundary	1	1256.77	333.33	1124.34	298.71	335.30	181.62	107.61
23	ER3a	ExonRegion	0	1639.72	1936.57	2614.96	2641.72	1821.91	2450.34	838.84
24	E3_Da	NovelBoundary	1	1468.91	471.28	1638.30	617.19	306.23	434.05	136.66
25	E3a_E4a	KnownJunction	0	1290.58	2708.69	2407.62	3618.67	3591.06	3433.26	1618.79
26	E3a_E5a	NovelJunction	1	373.85	388.11	367.71	368.79	113.12	296.54	72.45
27	I3	Intron	1	1553.73	334.52	1803.83	423.92	362.15	273.98	160.39
28	I3_AR1	ActiveIntronRegion	1	1555.66	334.93	1806.09	424.45	362.60	274.32	160.60
29	E4_Aa	NovelBoundary	1	670.55	158.57	738.68	221.98	164.64	190.89	59.79
30	ER4a	ExonRegion	0	1610.38	1507.03	2374.97	2163.46	2149.18	2104.75	768.26
31	E4_Da	NovelBoundary	1	2181.37	532.36	1936.65	550.76	592.87	453.51	211.75
32	E4a_E5a	KnownJunction	1	499.10	898.77	1299.32	1526.94	1620.91	1470.02	599.28
33	I4	Intron	1	1704.91	362.52	1509.57	370.79	410.30	348.77	165.19
34	I4_AR1	ActiveIntronRegion	0	1708.35	363.20	1512.60	371.53	411.09	349.46	165.52
35	E5_Aa	NovelBoundary	1	1368.51	449.82	1010.67	414.76	376.15	352.74	166.80
36	ER5a	ExonRegion	0	1378.67	1597.25	1865.52	2233.09	1972.53	1927.32	725.61
37	E5a_E6a	KnownJunction	0	1650.55	2023.45	2360.76	2725.88	1943.86	2334.82	1036.69
38	ER6a	ExonRegion	0	1383.45	1899.73	2250.12	2583.78	2077.09	2293.11	976.60
39	E6_Da	NovelBoundary	1	338.76	203.66	428.28	195.22	56.78	255.67	57.58
40	E6a_E7a	KnownJunction	0	1600.05	2205.36	2348.66	2882.60	2820.10	2686.01	1091.22
41	E7_Aa	NovelBoundary	1	421.02	226.56	483.50	247.53	82.05	324.12	47.80
42	ER7a	ExonRegion	0	1936.54	1829.89	2687.30	2631.10	2912.16	2458.85	1103.03
43	E7a_E8a	KnownJunction	0	1998.89	1468.10	2718.55	2097.09	2629.11	2143.47	968.72
44	ER8a	ExonRegion	0	1730.73	1852.04	2474.66	2573.65	2304.45	2510.96	1012.35
45	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER9a	ExonRegion	0	1713.09	1880.34	2208.94	2416.03	2489.21	2326.62	944.24
47	E9_Da	NovelBoundary	0	1677.00	1273.93	1856.53	1828.41	1148.26	1787.25	637.30
48	E9a_E10a	KnownJunction	0	1269.42	1551.85	1650.52	1913.82	1915.09	1854.06	765.40
49	E9a_E11a	NovelJunction	0	132.02	86.28	93.82	78.02	218.22	83.11	82.45
50	E10_Aa	NovelBoundary	0	658.40	179.07	652.28	246.91	69.18	283.33	100.64
51	ER10a	ExonRegion	0	1421.96	1464.92	1725.91	1927.39	1934.28	1870.86	757.40
52	E10_Da	NovelBoundary	1	456.44	78.92	496.84	127.76	105.21	112.85	49.93
53	E10a_E11a	KnownJunction	0	1208.30	1232.24	1376.13	1694.39	1983.58	1726.52	705.39
54	I10	Intron	1	654.61	103.49	594.51	180.10	73.84	164.72	61.41
55	I10_AR1	ActiveIntronRegion	0	656.45	103.79	596.19	180.62	74.04	165.20	61.58
56	E11_Aa	NovelBoundary	0	357.65	112.10	326.32	175.82	68.88	156.94	59.56
57	ER11a	ExonRegion	0	1298.29	1296.47	1271.90	1886.25	1811.10	1759.81	692.24
58	E11a_E12a	KnownJunction	0	2025.24	1199.16	1558.30	1486.46	1715.25	1170.13	577.23
59	E11a_E13a	KnownJunction	1	145.17	213.95	125.87	479.40	124.28	475.40	26.87
60	E12_Aa	NovelBoundary	1	191.42	46.66	306.79	60.95	7.35	76.75	17.38
61	ER12a	ExonRegion	0	2066.88	1364.62	1737.11	1519.67	1394.84	1393.86	670.14
62	E12_Da	NovelBoundary	1	569.41	54.36	618.15	87.37	8.62	71.88	11.79
63	E12a_E13a	KnownJunction	0	1333.53	1199.90	1176.79	1306.66	1247.78	1340.31	573.77
64	I12	Intron	1	155.19	45.74	247.28	76.38	9.16	102.54	9.21
65	I12_AR1	ActiveIntronRegion	1	155.68	45.89	248.03	76.61	9.19	102.87	9.24
66	ER13a	ExonRegion	0	2738.34	1260.77	1904.00	1789.57	2286.51	1985.08	634.15
67	E13_Da	KnownBoundary	0	1427.04	670.79	1152.62	1022.58	1233.23	1332.48	282.79
68	ER13b	ExonRegion	0	456.00	405.70	433.91	594.86	409.90	767.35	163.53
69	ER13c	ExonRegion	0	19.21	20.65	42.68	33.67	59.12	34.33	12.82
70	IG6	Intergenic	0	6.42	9.19	4.85	7.49	2.11	7.48	5.54
71	IG6_SR4	SilentIntergenicRegion	0	5.89	10.18	4.39	7.72	1.86	7.22	5.70
72	IG6_AR1	ActiveIntergenicRegion	0	8.41	10.46	4.45	11.01	2.74	8.48	3.94
73	IG6_SR2	SilentIntergenicRegion	0	6.37	9.30	5.71	7.40	2.04	8.56	7.20
74	IG6_SR1	SilentIntergenicRegion	0	2.83	7.55	3.53	6.33	1.76	6.07	4.67