Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CLK4	Gene	0	123.41	91.19	151.17	145.98	49.29	180.29	24.52
2	316308	Transcript	0	162.19	121.03	192.90	195.29	66.12	233.35	30.70
3	ER1a	ExonRegion	0	122.21	76.24	143.77	135.15	49.54	145.41	26.41
4	E1a_E2a	KnownJunction	0	57.88	67.99	58.13	92.49	9.15	106.69	14.92
5	ER2a	ExonRegion	0	109.53	110.10	156.13	194.57	30.82	234.68	28.92
6	E2a_E3a	KnownJunction	0	79.91	61.19	114.10	139.11	46.75	218.23	16.24
7	I2	Intron	0	27.57	12.62	22.94	11.40	4.60	10.12	5.54
8	I2_AR8	ActiveIntronRegion	0	47.19	23.55	40.06	24.97	7.14	23.98	8.56
9	ER3a	ExonRegion	0	113.95	150.15	174.68	240.56	65.78	298.18	27.79
10	E3a_E4a	KnownJunction	0	137.91	101.33	158.46	188.64	35.55	255.19	15.52
11	E3a_E5a	NovelJunction	0	48.72	63.37	52.67	42.34	38.75	45.64	15.54
12	E4_Aa	NovelBoundary	0	17.47	12.45	20.03	6.53	0.88	5.25	10.85
13	ER4a	ExonRegion	0	129.72	88.35	164.25	200.34	38.33	267.52	19.09
14	E4a_E5a	KnownJunction	0	100.57	89.64	136.71	191.64	41.50	234.18	15.21
15	I4	Intron	0	25.08	5.01	17.74	3.79	3.18	2.40	4.37
16	I4_AR1	ActiveIntronRegion	0	25.22	5.03	17.84	3.81	3.20	2.41	4.39
17	E5_Aa	NovelBoundary	1	41.56	9.14	35.48	11.81	4.38	6.16	13.39
18	ER5a	ExonRegion	0	181.91	153.00	199.36	212.80	83.43	290.05	31.44
19	E5a_E6a	KnownJunction	0	296.83	198.32	282.89	264.90	98.21	345.74	44.66
20	ER6a	ExonRegion	0	295.32	165.33	311.79	235.69	116.91	327.45	45.73
21	E6a_E7a	KnownJunction	0	202.07	143.99	259.40	226.67	94.31	250.85	50.27
22	ER7a	ExonRegion	0	183.31	117.86	241.89	189.26	76.38	225.75	33.76
23	E7a_E8a	KnownJunction	0	121.39	91.61	204.46	149.60	55.70	209.04	26.84
24	ER8a	ExonRegion	0	118.67	71.34	177.95	155.38	58.49	165.37	25.44
25	E8a_E9a	KnownJunction	0	132.47	92.87	175.75	158.18	75.27	166.27	32.16
26	ER9a	ExonRegion	0	162.38	105.96	194.32	193.38	65.41	201.09	32.77
27	E9a_E10a	KnownJunction	0	160.84	132.80	164.31	216.08	66.81	211.53	24.87
28	E9a_E11a	NovelJunction	0	3.00	3.15	9.76	4.85	0.90	15.46	0.00
29	ER10a	ExonRegion	0	216.95	141.27	222.29	225.13	76.83	230.15	32.37
30	E10a_E11a	KnownJunction	0	235.36	154.27	258.18	267.36	96.66	301.31	51.26
31	ER11a	ExonRegion	0	215.83	190.85	250.87	253.15	100.57	269.32	45.15
32	E11a_E12a	KnownJunction	0	247.66	182.59	253.25	236.40	81.12	254.44	38.69
33	ER12a	ExonRegion	0	206.69	159.53	243.63	237.59	81.08	274.74	37.75
34	E12a_E13a	KnownJunction	0	154.63	133.80	192.53	210.47	83.61	255.03	35.05
35	ER13a	ExonRegion	0	70.82	45.46	83.41	67.81	24.86	95.64	15.10