Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FCHSD1	Gene	0	17.97	32.36	12.63	16.79	29.19	17.34	37.62
2	354789	Transcript	0	19.75	42.81	13.41	16.85	30.63	17.10	48.60
3	ER1a	ExonRegion	1	8.58	14.17	3.89	5.54	22.97	2.66	16.64
4	E1a_E2a	KnownJunction	0	20.80	39.04	12.17	18.88	47.79	9.06	51.46
5	ER2a	ExonRegion	0	6.92	29.37	4.51	12.75	17.45	11.15	20.85
6	E2a_E3a	KnownJunction	1	1.99	30.74	1.48	5.50	3.34	5.33	6.99
7	ER3a	ExonRegion	1	6.93	36.76	3.02	6.34	5.76	6.85	19.42
8	E3a_E4a	KnownJunction	1	14.42	32.21	3.02	5.85	13.67	8.33	35.21
9	ER4a	ExonRegion	0	11.33	20.69	3.82	8.44	8.00	6.44	19.25
10	E4a_E5a	KnownJunction	0	1.84	0.00	1.72	0.00	0.00	0.00	0.87
11	ER5a	ExonRegion	0	13.17	28.54	6.84	8.10	25.92	11.06	23.85
12	E5a_E6a	KnownJunction	0	19.21	43.79	12.44	14.82	38.94	12.11	47.44
13	ER6a	ExonRegion	0	19.50	49.07	14.52	15.85	38.26	18.71	56.52
14	E6a_E7a	KnownJunction	0	23.75	47.55	12.49	28.34	34.56	12.03	58.20
15	ER7a	ExonRegion	1	19.70	50.85	15.20	26.58	35.98	11.40	66.46
16	E7a_E8a	KnownJunction	1	12.83	49.29	13.32	19.51	15.31	18.49	61.21
17	ER8a	ExonRegion	0	19.29	55.46	17.97	27.02	40.75	21.70	65.44
18	E8_Da	NovelBoundary	0	9.40	9.25	5.85	1.46	19.09	7.45	6.45
19	E8a_E9a	KnownJunction	0	15.66	54.04	15.16	19.51	35.34	16.19	63.46
20	E9_Aa	NovelBoundary	0	5.92	5.25	8.74	6.29	7.40	0.00	12.40
21	ER9a	ExonRegion	0	15.69	45.26	16.96	23.14	38.04	19.15	57.49
22	E9a_E10a	KnownJunction	0	14.75	44.08	18.68	19.51	27.20	19.86	50.17
23	ER10a	ExonRegion	0	16.10	34.00	17.41	16.91	32.16	18.13	47.91
24	E10a_E11a	KnownJunction	0	18.98	34.00	11.04	17.66	33.66	9.30	44.87
25	E11_Aa	NovelBoundary	0	10.03	4.47	10.73	5.91	0.00	5.87	4.82
26	ER11a	ExonRegion	0	14.03	35.75	17.94	18.49	27.27	10.52	32.05
27	E11_Da	NovelBoundary	0	7.99	13.42	5.37	3.14	10.72	4.45	8.74
28	E11a_E12a	KnownJunction	0	21.03	34.07	14.14	8.21	17.61	8.87	36.98
29	E12_Aa	NovelBoundary	0	5.36	13.92	11.04	4.82	4.61	5.55	8.64
30	ER12a	ExonRegion	0	21.34	34.98	14.50	14.25	27.07	16.42	42.68
31	E12a_E13a	KnownJunction	0	16.54	29.14	22.49	18.10	31.63	19.59	37.59
32	ER13a	ExonRegion	0	15.66	31.99	13.39	11.27	15.47	11.55	35.31
33	E13a_E14a	KnownJunction	0	21.25	39.67	15.22	20.10	27.71	13.83	49.50
34	ER14a	ExonRegion	0	24.95	49.84	15.80	20.54	33.35	17.27	58.76
35	E14a_E15a	KnownJunction	0	22.20	60.63	13.92	19.45	35.89	36.34	69.29
36	ER15a	ExonRegion	0	21.56	63.36	14.97	26.02	33.61	27.06	68.44
37	E15_Da	NovelBoundary	0	6.34	3.89	4.54	9.67	4.22	1.07	18.77
38	E15a_E16a	KnownJunction	0	26.52	61.45	11.98	26.63	29.46	31.44	72.32
39	I15	Intron	1	4.14	4.39	4.25	1.13	3.15	4.44	13.64
40	I15_SR1	SilentIntronRegion	1	4.19	4.44	4.29	1.14	3.18	4.49	13.78
41	E16_Aa	NovelBoundary	0	8.65	5.54	8.58	7.96	3.11	2.73	19.68
42	ER16a	ExonRegion	0	21.35	70.07	14.68	20.54	32.45	34.48	70.86
43	E16_Da	NovelBoundary	0	7.28	6.49	5.60	1.57	7.19	3.32	20.35
44	E16a_E17a	KnownJunction	1	27.27	67.91	15.02	11.38	27.18	33.37	66.58
45	I16	Intron	0	3.89	3.45	3.68	0.71	2.45	0.70	8.35
46	I16_SR1	SilentIntronRegion	1	3.94	3.49	3.73	0.72	2.48	0.71	8.47
47	E17_Aa	NovelBoundary	1	4.21	6.52	9.94	2.71	3.23	2.52	18.30
48	ER17a	ExonRegion	0	35.09	58.84	19.88	22.51	39.77	27.33	62.09
49	E17a_E18a	KnownJunction	0	32.51	54.43	22.25	17.37	49.13	21.84	61.41
50	E17a_E19a	NovelJunction	1	1.50	0.00	0.00	0.00	1.06	5.04	9.56
51	ER18a	ExonRegion	0	29.11	48.88	23.45	25.17	38.21	25.91	56.16
52	E18a_E19a	KnownJunction	0	23.63	46.58	16.97	20.07	17.24	22.40	51.56
53	I18	Intron	0	9.20	3.22	10.50	4.00	15.62	2.22	9.18
54	I18_SR1	SilentIntronRegion	0	2.89	4.31	3.05	2.65	9.22	0.87	1.90
55	I18_AR1	ActiveIntronRegion	0	10.80	2.96	12.38	4.35	17.26	2.56	11.00
56	E19_Aa	NovelBoundary	0	10.83	1.16	7.92	1.49	14.59	0.00	11.25
57	ER19a	ExonRegion	0	44.67	57.25	20.56	19.39	66.41	26.42	84.35
58	E19a_E20a	KnownJunction	0	53.98	63.97	18.97	21.56	102.54	27.47	98.00
59	ER20a	ExonRegion	0	16.22	21.71	11.04	15.90	27.52	16.76	27.63