Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	WWC1	Gene	0	221.41	198.72	170.05	245.52	88.13	17.07	70.47
2	265293	Transcript	0	221.45	140.74	115.40	186.38	65.55	13.81	49.69
3	393895	Transcript	0	151.42	121.27	84.53	146.90	69.01	17.00	35.90
4	IG30_SR3	SilentIntergenicRegion	0	5.38	18.64	2.67	17.61	1.86	0.49	3.28
5	IG30_AR3	ActiveIntergenicRegion	0	1.27	11.26	0.68	8.54	1.65	0.00	1.35
6	ER1a	ExonRegion	0	80.05	126.77	64.77	124.43	31.53	8.10	27.16
7	E1a_E2a	KnownJunction	0	110.92	209.54	90.13	193.11	52.01	12.27	37.30
8	E1a_E3a	NovelJunction	1	4.91	20.23	4.47	11.49	2.24	2.71	2.97
9	I1_AR14	ActiveIntronRegion	1	22.90	10.20	16.80	15.03	2.79	0.00	16.93
10	I1_AR15	ActiveIntronRegion	1	21.63	14.75	20.13	10.33	3.47	0.00	16.29
11	I1_AR16	ActiveIntronRegion	0	22.54	16.87	23.03	9.01	4.77	0.00	15.97
12	I1_SR7	SilentIntronRegion	0	24.71	18.13	23.60	9.40	5.54	0.00	14.22
13	ER2a	ExonRegion	0	168.44	245.04	144.74	267.96	73.48	18.45	68.51
14	E2a_E3a	KnownJunction	0	175.03	241.70	174.56	216.76	75.64	14.50	77.33
15	ER3a	ExonRegion	0	194.14	270.97	195.05	283.34	86.70	15.76	83.78
16	E3a_E4a	KnownJunction	0	210.34	249.68	226.22	281.48	90.23	9.27	76.67
17	ER4a	ExonRegion	0	321.91	279.72	271.72	326.41	121.43	14.14	89.13
18	E4a_E5a	KnownJunction	0	361.84	258.43	287.81	323.55	130.62	22.89	78.59
19	ER5a	ExonRegion	0	339.04	249.21	298.53	342.60	126.51	28.32	94.60
20	E5a_E6a	KnownJunction	0	249.31	237.20	278.87	292.99	133.38	23.85	85.95
21	E5a_E7a	NovelJunction	0	4.36	31.58	10.78	26.55	2.10	0.00	1.50
22	ER6a	ExonRegion	0	378.59	298.87	323.30	326.26	127.04	21.98	99.65
23	E6a_E7a	KnownJunction	0	380.88	297.60	278.01	325.80	137.56	17.80	91.69
24	ER7a	ExonRegion	0	276.28	290.04	241.76	291.94	119.44	18.68	94.51
25	E7a_E8a	KnownJunction	0	272.43	275.48	217.32	308.84	113.35	17.15	85.46
26	ER8a	ExonRegion	0	219.19	240.11	192.87	267.89	96.31	14.43	80.45
27	E8a_E9a	KnownJunction	0	184.06	185.66	175.39	227.21	85.46	13.83	64.66
28	ER9a	ExonRegion	0	219.43	228.60	166.34	254.14	82.24	16.87	60.92
29	E9a_E10a	KnownJunction	0	237.92	209.75	178.54	267.88	78.15	28.19	62.71
30	ER10a	ExonRegion	0	258.10	239.66	194.73	262.68	65.62	20.13	65.74
31	E10a_E11a	KnownJunction	0	273.18	204.18	195.77	187.99	66.09	9.84	48.97
32	ER11a	ExonRegion	0	137.86	176.07	125.22	201.73	57.47	15.99	61.89
33	E11a_E12a	KnownJunction	0	143.17	99.44	98.01	172.95	52.01	9.84	54.36
34	ER12a	ExonRegion	0	91.74	118.25	81.22	190.41	59.04	12.57	42.46
35	E12a_E13a	KnownJunction	0	172.47	138.98	154.71	253.92	94.12	11.58	74.84
36	ER13a	ExonRegion	0	235.38	161.13	188.60	274.87	108.79	17.50	90.33
37	E13a_E14a	KnownJunction	0	267.29	141.08	228.46	261.84	115.36	17.55	90.75
38	ER14a	ExonRegion	0	317.86	166.60	250.94	288.49	106.43	18.77	91.78
39	E14a_E15a	KnownJunction	0	276.92	195.01	209.43	317.56	114.73	27.07	96.38
40	ER15a	ExonRegion	0	217.13	143.17	166.52	220.82	95.31	14.46	71.40
41	E15a_E16a	KnownJunction	0	132.23	90.74	94.40	164.82	89.49	10.51	57.51
42	ER16a	ExonRegion	0	143.13	120.00	83.78	179.08	60.77	6.63	62.76
43	E16a_E17a	KnownJunction	0	94.23	106.11	65.47	189.34	44.95	5.87	72.52
44	ER17a	ExonRegion	0	152.24	148.58	96.31	228.84	69.29	11.45	73.49
45	E17a_E18a	KnownJunction	0	165.18	165.90	89.92	276.19	87.35	11.04	67.69
46	ER18a	ExonRegion	0	114.34	165.19	80.33	242.36	83.33	11.16	51.16
47	E18a_E19a	KnownJunction	0	238.08	217.66	164.61	313.80	125.25	20.26	110.28
48	ER19a	ExonRegion	0	202.60	199.50	131.68	263.02	81.00	18.66	78.32
49	E19a_E20a	KnownJunction	0	225.91	219.13	171.54	297.81	79.28	29.02	83.34
50	ER20a	ExonRegion	0	263.10	258.96	172.05	342.31	130.53	34.09	84.09
51	E20a_E21a	KnownJunction	1	116.96	111.15	75.70	140.30	78.49	21.44	38.85
52	E20a_E21b	KnownJunction	0	133.00	129.89	80.60	186.87	34.79	5.47	30.35
53	E21_Ab	NovelBoundary	0	53.93	59.87	43.53	72.39	12.79	3.48	19.62
54	ER21a	ExonRegion	1	109.56	106.33	73.34	143.34	52.94	17.62	35.40
55	ER21b	ExonRegion	0	272.74	258.72	161.27	326.56	125.81	24.27	80.34
56	E21a_E22a	KnownJunction	0	250.30	123.16	118.27	162.47	67.52	15.73	54.63
57	E21a_E22b	KnownJunction	1	227.73	146.33	104.54	157.05	75.59	11.95	33.46
58	ER22a	ExonRegion	0	281.06	169.17	147.33	209.80	94.35	20.23	64.09
59	ER22b	ExonRegion	0	469.17	288.87	263.73	415.40	179.06	24.89	110.50
60	E22a_E23a	KnownJunction	1	579.41	275.64	273.47	374.81	203.74	25.70	92.27
61	ER23a	ExonRegion	0	260.36	164.48	197.66	203.83	87.53	17.04	64.59
62	IG31	Intergenic	0	21.51	11.82	17.63	17.47	3.87	1.18	10.31
63	IG31_AR1	ActiveIntergenicRegion	0	21.62	27.66	48.45	27.20	5.82	2.19	28.54
64	IG31_SR1	SilentIntergenicRegion	0	32.22	41.88	39.32	30.06	10.63	2.78	33.12
65	IG31_AR2	ActiveIntergenicRegion	0	39.30	34.99	42.07	49.90	8.98	2.67	32.32
66	IG31_AR3	ActiveIntergenicRegion	0	26.28	30.68	21.12	31.10	7.68	0.93	21.09
67	IG31_SR2	SilentIntergenicRegion	0	43.72	25.26	33.40	42.37	10.50	2.18	25.92
68	IG31_AR5	ActiveIntergenicRegion	0	65.32	43.33	61.08	59.65	18.49	1.23	45.87
69	IG31_AR6	ActiveIntergenicRegion	0	64.23	44.29	58.75	58.32	19.29	1.67	43.88
70	IG31_AR7	ActiveIntergenicRegion	0	39.68	27.65	29.73	40.59	9.08	3.31	18.39
71	IG31_SR3	SilentIntergenicRegion	0	13.24	2.98	10.38	6.06	1.16	0.38	4.19