Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	APBB3	Gene	0	45.92	38.22	12.12	10.26	25.15	26.27	35.32
2	356738	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	3.18
3	354402	Transcript	0	3.77	6.96	0.55	1.03	2.63	2.04	1.63
4	231029	Transcript	1	16.78	16.20	4.03	4.45	9.10	4.09	5.69
5	357560	Transcript	0	0	0	0	0	0	0	0
6	358580	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	IG18	Intergenic	0	37.72	36.33	31.17	29.57	12.48	27.90	20.19
8	IG18_AR1	ActiveIntergenicRegion	0	38.04	36.64	31.43	29.82	12.58	28.14	20.37
9	ER1a	ExonRegion	0	13.80	7.86	8.73	6.00	7.29	9.54	13.26
10	E1_Ab	KnownBoundary	0	11.67	9.43	3.74	4.33	3.16	4.07	10.52
11	ER1b	ExonRegion	0	7.95	12.62	3.46	6.96	8.96	17.45	18.74
12	E1_Da	NovelBoundary	1	15.22	5.70	6.06	3.90	6.22	5.60	3.28
13	E1a_E2a	KnownJunction	1	7.36	11.03	1.42	2.41	4.06	14.71	12.68
14	I1	Intron	0	13.06	10.81	9.57	4.71	9.24	11.24	4.37
15	I1_AR1	ActiveIntronRegion	0	13.13	10.88	9.64	4.74	9.30	11.32	4.40
16	E2_Aa	NovelBoundary	0	11.15	17.92	4.45	4.80	7.15	20.53	9.11
17	ER2a	ExonRegion	0	31.37	30.30	10.36	10.61	17.91	23.67	32.48
18	E2a_E3a	KnownJunction	0	28.42	29.14	13.19	6.85	24.55	14.50	30.38
19	ER3a	ExonRegion	0	28.06	26.73	12.40	6.30	17.61	11.51	28.19
20	E3_Da	NovelBoundary	1	16.51	8.64	5.40	0.00	14.06	1.18	0.66
21	E3a_E4a	KnownJunction	0	25.20	12.51	4.12	2.41	13.12	13.02	23.36
22	E3a_E5a	NovelJunction	0	8.58	15.92	1.29	1.46	0.00	10.18	4.74
23	I3	Intron	1	18.24	13.32	8.34	1.63	15.97	2.73	4.77
24	I3_AR1	ActiveIntronRegion	1	18.31	13.36	8.36	1.64	16.02	2.73	4.78
25	E4_Aa	NovelBoundary	0	23.80	15.89	4.01	4.55	15.26	6.24	7.57
26	ER4a	ExonRegion	0	27.98	13.52	7.53	3.84	23.55	13.65	29.62
27	E4_Da	NovelBoundary	1	12.57	16.79	4.73	5.15	4.31	1.53	3.73
28	E4a_E5a	KnownJunction	0	30.56	17.26	12.76	5.63	20.96	15.65	35.63
29	ER5a	ExonRegion	0	60.41	46.23	15.58	13.91	32.72	34.55	41.62
30	E5a_E6a	KnownJunction	0	55.79	59.19	15.28	18.72	37.58	28.94	41.36
31	ER6a	ExonRegion	0	43.84	48.82	9.58	7.08	24.13	23.86	35.12
32	E6_Da	NovelBoundary	0	69.30	64.65	12.82	11.78	48.99	31.68	31.21
33	E6a_E7a	KnownJunction	0	3.61	2.73	0.00	1.68	2.07	0.00	0.00
34	E6a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	3.18
35	E6a_E9b	NovelJunction	1	5.22	0.00	3.36	0.00	2.12	0.00	27.30
36	I6	Intron	0	21.30	24.69	5.26	5.44	16.91	12.33	8.76
37	I6_AR1	ActiveIntronRegion	0	21.64	25.08	5.36	5.53	17.17	12.51	8.89
38	E7_Aa	NovelBoundary	0	54.54	45.48	11.53	13.36	43.22	45.72	18.47
39	ER7a	ExonRegion	1	29.95	29.67	8.06	7.21	16.12	8.19	11.38
40	E7_Da	NovelBoundary	0	45.86	53.94	15.42	21.65	24.30	51.96	30.17
41	E8a_E9a	KnownJunction	0	3.77	6.96	0.55	1.03	2.63	2.04	1.63
42	E8a_E9b	KnownJunction	0	6.34	9.04	0.55	2.06	7.56	10.18	4.34
43	ER8a	ExonRegion	0	6.79	7.90	0.34	0.42	6.88	1.84	2.70
44	I8	Intron	0	15.69	18.88	6.10	4.64	17.22	6.08	10.54
45	I8_AR1	ActiveIntronRegion	0	15.89	19.14	6.20	4.68	17.46	6.17	10.70
46	E9_Aa	NovelBoundary	0	23.97	15.18	4.22	2.57	18.42	13.94	15.85
47	E9_Ab	NovelBoundary	0	24.67	26.38	7.08	4.36	20.84	11.42	17.67
48	ER9a	ExonRegion	1	10.65	16.57	1.45	0.79	10.01	3.73	11.50
49	ER9b	ExonRegion	0	55.80	49.35	14.03	15.76	45.96	33.34	55.51
50	E9a_E10a	KnownJunction	1	65.96	58.24	21.61	8.26	44.49	52.74	76.87
51	ER10a	ExonRegion	0	58.68	59.20	19.60	12.13	42.18	47.84	73.08
52	E10_Da	NovelBoundary	0	7.99	8.98	1.98	2.87	0.92	8.90	0.00
53	E10a_E11a	KnownJunction	0	42.88	47.21	16.63	11.41	49.59	30.61	61.75
54	I10	Intron	1	16.58	6.67	3.12	2.51	0.94	5.30	1.75
55	I10_AR1	ActiveIntronRegion	0	18.80	7.41	3.48	2.99	1.13	6.43	1.90
56	E11_Aa	NovelBoundary	1	23.95	8.22	4.76	6.26	1.91	7.37	0.87
57	ER11a	ExonRegion	0	56.86	46.45	18.31	12.16	56.44	30.97	68.06
58	E11_Da	NovelBoundary	0	10.70	10.67	5.30	1.49	0.95	5.84	0.87
59	E11a_E12a	KnownJunction	0	60.32	38.49	20.74	13.60	55.30	36.10	76.09
60	E11a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
61	E12_Aa	NovelBoundary	0	8.21	11.72	4.86	9.94	2.14	5.20	1.73
62	ER12a	ExonRegion	0	45.26	49.96	15.04	9.24	33.50	24.04	57.73
63	E12a_E13a	KnownJunction	1	24.50	30.79	7.01	4.58	14.41	5.95	31.90
64	E13_Aa	NovelBoundary	1	14.67	13.48	2.96	7.45	0.00	10.72	2.77
65	ER13a	ExonRegion	0	47.17	46.54	12.16	9.31	32.82	19.34	35.63
66	E13_Da	NovelBoundary	0	8.61	3.21	4.05	5.17	1.94	8.82	2.34
67	E13a_E14a	KnownJunction	1	71.97	51.44	8.82	10.10	29.62	9.62	32.75
68	E14_Aa	NovelBoundary	1	14.82	12.61	6.04	3.31	2.35	1.23	5.02
69	ER14a	ExonRegion	0	75.57	52.33	14.85	14.01	26.07	41.46	37.51
70	IG17	Intergenic	0	15.02	16.09	4.76	6.16	7.21	14.20	7.45
71	IG17_AR1	ActiveIntergenicRegion	0	15.12	16.21	4.79	6.21	7.26	14.28	7.50