Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TRIM36	Gene	0	87.77	93.30	60.23	29.62	47.68	23.46	12.24
2	379618	Transcript	0	0.00	0.00	0.00	0.00	1.03	0.78	0.21
3	282369	Transcript	0	103.51	139.59	76.04	41.06	61.15	30.93	16.03
4	379617	Transcript	0	0.09	0.00	0.08	0.00	0.25	0.42	0.15
5	IG22	Intergenic	0	5.38	2.87	6.07	2.08	6.84	2.12	9.26
6	IG22_AR11	ActiveIntergenicRegion	0	32.00	13.40	28.89	10.48	46.59	11.22	24.41
7	IG22_SR8	SilentIntergenicRegion	0	8.77	3.59	12.41	1.72	7.18	1.89	9.40
8	IG22_AR10	ActiveIntergenicRegion	0	9.54	7.77	13.97	3.47	11.50	4.34	14.06
9	IG22_SR7	SilentIntergenicRegion	0	5.54	1.40	8.37	1.85	8.12	1.50	5.81
10	IG22_AR9	ActiveIntergenicRegion	0	14.61	3.58	20.44	3.25	27.22	7.08	14.62
11	IG22_AR8	ActiveIntergenicRegion	0	11.71	6.09	16.48	5.09	19.39	3.08	15.39
12	IG22_SR6	SilentIntergenicRegion	0	1.46	3.18	1.91	1.60	1.03	1.57	8.95
13	IG22_SR5	SilentIntergenicRegion	0	2.04	1.45	2.41	1.18	1.36	0.80	9.02
14	IG22_SR3	SilentIntergenicRegion	0	3.29	1.96	3.00	0.43	2.09	1.01	10.12
15	IG22_AR4	ActiveIntergenicRegion	0	3.24	0.40	1.35	2.49	0.09	2.45	14.62
16	IG22_AR3	ActiveIntergenicRegion	0	2.62	1.55	2.27	0.37	1.35	1.93	12.79
17	IG22_SR2	SilentIntergenicRegion	0	0.73	0.33	2.22	1.26	1.61	1.11	10.79
18	IG22_AR2	ActiveIntergenicRegion	0	1.19	2.57	2.28	2.27	0.80	2.43	10.64
19	ER1a	ExonRegion	0	0.00	0.00	0.68	0.00	0.00	0.00	0.00
20	ER1b	ExonRegion	0	0.12	0.69	0.17	0.34	1.10	0.34	0.00
21	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E1a_E4a	KnownJunction	0	0.00	0.00	0.50	0.00	0.99	0.00	0.00
24	ER2a	ExonRegion	0	0.17	0.00	0.15	0.00	0.49	0.84	0.31
25	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	2.07	1.55	0.43
26	I3_AR3	ActiveIntronRegion	0	5.19	20.07	3.47	8.95	4.24	5.37	1.16
27	ER4a	ExonRegion	0	57.43	146.15	53.65	38.07	36.43	40.90	13.63
28	E4a_E5a	KnownJunction	1	74.90	178.09	64.08	54.16	48.41	40.33	23.06
29	ER5a	ExonRegion	0	106.90	196.59	80.40	66.00	66.34	44.29	23.45
30	E5a_E6a	KnownJunction	0	117.76	181.09	75.31	48.95	73.33	35.35	25.87
31	ER6a	ExonRegion	0	112.68	162.77	81.38	33.02	67.43	29.82	23.71
32	E6_Da	NovelBoundary	1	41.21	19.97	16.51	3.55	4.45	1.53	0.00
33	E6a_E7a	KnownJunction	0	65.22	127.89	35.74	36.98	41.13	28.25	10.30
34	E6a_E8a	NovelJunction	1	20.41	8.41	8.35	4.31	1.06	1.66	0.00
35	I6	Intron	1	29.44	9.07	15.62	2.96	2.41	1.54	0.33
36	I6_SR1	SilentIntronRegion	0	31.17	9.84	16.57	3.14	2.95	1.56	0.43
37	I6_AR1	ActiveIntronRegion	1	33.35	11.27	18.64	4.18	2.00	1.54	0.34
38	I6_SR2	SilentIntronRegion	0	25.07	6.87	12.78	2.10	1.83	1.51	0.18
39	E7_Aa	NovelBoundary	0	30.24	15.42	19.14	5.63	1.18	1.26	1.45
40	ER7a	ExonRegion	0	94.11	142.45	65.88	45.84	55.69	27.18	18.58
41	E7_Da	NovelBoundary	0	30.28	9.88	16.61	4.14	5.46	0.00	1.35
42	E7a_E8a	KnownJunction	0	104.26	105.80	62.83	48.79	69.99	26.88	18.47
43	I7	Intron	1	29.89	4.47	14.17	1.58	1.92	0.79	0.32
44	I7_SR1	SilentIntronRegion	1	24.16	4.28	14.93	0.73	1.05	0.24	0.13
45	I7_SR2	SilentIntronRegion	0	31.22	4.52	14.02	1.77	2.12	0.92	0.36
46	E8_Aa	NovelBoundary	1	45.08	5.02	24.31	4.39	5.16	0.00	0.00
47	ER8a	ExonRegion	0	182.39	143.19	107.31	58.63	74.28	37.07	15.94
48	E8a_E9a	KnownJunction	0	141.75	135.82	106.81	30.13	80.55	28.84	15.29
49	ER9a	ExonRegion	0	125.24	138.71	92.41	22.94	57.67	26.94	12.47
50	E9_Da	NovelBoundary	1	62.70	13.98	17.49	12.46	2.70	6.30	0.00
51	E9a_E10a	KnownJunction	0	81.45	134.85	93.23	26.22	73.33	18.38	10.85
52	E10_Aa	NovelBoundary	0	26.45	10.46	16.58	4.88	3.30	1.26	1.76
53	ER10a	ExonRegion	0	129.13	160.73	101.69	45.80	68.44	32.14	15.48
54	E10a_E11a	KnownJunction	0	166.63	189.29	134.03	57.00	68.49	49.77	17.10
55	ER11a	ExonRegion	0	117.59	159.43	87.77	58.24	75.80	35.88	18.70
56	E11a_E12a	KnownJunction	0	80.08	127.52	57.41	41.34	85.94	30.79	12.28
57	ER12a	ExonRegion	0	105.59	82.15	68.33	27.00	56.55	24.01	13.36