Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PAPD4	Gene	0	172.74	135.07	182.27	109.54	156.36	150.37	148.66
2	296783	Transcript	0	195.20	153.24	204.11	123.29	174.74	165.91	162.11
3	IG8_AR2	ActiveIntergenicRegion	0	46.34	50.46	31.49	36.18	9.20	40.95	28.71
4	ER1a	ExonRegion	0	45.94	60.50	46.55	68.36	34.35	81.66	40.60
5	E1_Da	NovelBoundary	0	56.08	144.10	56.63	123.45	18.14	160.24	70.18
6	E1a_E2a	KnownJunction	0	4.76	5.96	7.77	9.24	7.22	4.45	4.49
7	I1	Intron	1	56.43	111.10	71.56	96.43	29.63	128.46	57.75
8	I1_AR1	ActiveIntronRegion	1	56.87	111.95	72.11	97.14	29.85	129.44	58.18
9	E2_Aa	NovelBoundary	0	102.03	199.40	141.38	174.41	35.96	199.39	110.50
10	ER2a	ExonRegion	0	41.65	85.64	64.41	64.77	58.31	82.63	54.01
11	E2a_E3a	KnownJunction	0	98.90	145.23	121.96	132.67	88.87	163.05	111.18
12	ER3a	ExonRegion	0	272.56	249.81	292.76	206.09	224.57	255.73	235.13
13	E3a_E4a	KnownJunction	0	272.76	279.29	311.20	247.13	203.63	316.64	274.99
14	ER4a	ExonRegion	0	299.76	317.98	310.01	236.60	212.90	305.76	286.29
15	E4a_E5a	KnownJunction	0	490.92	348.33	400.72	270.97	191.64	375.57	322.69
16	E4a_E6a	NovelJunction	0	0.00	12.53	9.04	7.10	3.18	4.77	0.73
17	ER5a	ExonRegion	0	329.11	211.07	285.84	183.47	275.84	220.55	237.91
18	E5a_E6a	KnownJunction	0	185.02	140.11	214.45	137.35	224.40	158.23	161.33
19	ER6a	ExonRegion	0	300.16	159.30	285.52	133.22	208.20	160.70	144.72
20	E6a_E7a	KnownJunction	1	311.27	135.48	319.84	128.98	199.20	196.36	134.96
21	ER7a	ExonRegion	0	218.90	122.37	231.30	84.48	154.66	132.59	112.18
22	E7a_E8a	KnownJunction	0	173.36	95.84	137.80	58.81	106.32	56.47	85.07
23	E7a_E9a	NovelJunction	1	31.53	4.81	28.64	18.67	2.24	35.32	1.18
24	ER8a	ExonRegion	0	160.84	120.67	134.30	69.26	148.68	97.09	115.34
25	E8_Da	NovelBoundary	1	40.11	33.34	59.39	16.63	12.26	15.33	12.64
26	E8a_E9a	KnownJunction	0	118.83	157.63	116.36	83.31	153.12	125.72	129.67
27	ER9a	ExonRegion	0	155.65	152.92	197.22	101.29	288.97	149.13	170.25
28	E9a_E10a	KnownJunction	0	249.50	145.33	278.57	131.18	377.84	163.40	222.48
29	ER10a	ExonRegion	0	307.30	190.78	326.26	152.89	240.22	232.84	291.08
30	E10a_E11a	KnownJunction	0	183.26	211.72	244.53	162.95	173.61	261.83	239.31
31	ER11a	ExonRegion	0	209.57	219.39	256.79	148.20	211.87	234.56	233.78
32	E11a_E12a	KnownJunction	0	245.91	190.18	279.34	120.56	426.66	205.55	239.41
33	E11a_E13a	NovelJunction	1	48.95	18.50	47.45	14.95	5.37	38.27	2.04
34	ER12a	ExonRegion	0	159.61	135.04	200.35	98.60	228.84	128.20	202.41
35	E12a_E13a	KnownJunction	0	75.82	53.02	105.18	65.59	125.52	60.03	134.20
36	ER13a	ExonRegion	0	135.47	100.73	144.55	90.37	118.94	114.47	112.27
37	E13a_E14a	KnownJunction	0	179.47	110.60	156.19	97.39	117.71	117.65	107.29
38	E13a_E15a	NovelJunction	1	1.65	2.71	8.06	14.71	1.04	19.40	0.00
39	ER14a	ExonRegion	0	136.80	134.97	164.61	111.51	111.50	138.80	117.87
40	E14a_E15a	KnownJunction	0	142.88	140.11	173.11	114.51	125.80	173.18	114.94
41	ER15a	ExonRegion	0	235.97	134.88	203.71	123.18	145.41	166.58	142.26
42	E15a_E16a	KnownJunction	0	192.59	105.45	180.99	114.51	109.20	148.50	128.45
43	ER16a	ExonRegion	0	116.82	89.95	135.07	74.42	122.93	115.32	118.78
44	IG9_AR1	ActiveIntergenicRegion	0	13.09	12.53	15.12	11.06	10.25	24.58	11.26
45	IG9_SR1	SilentIntergenicRegion	0	2.97	4.72	5.05	4.19	8.97	5.58	8.32