Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PDE4D	Gene	0	4.03	0.92	8.72	2.17	3.50	26.67	7.37
2	309641	Transcript	0	5.28	1.32	0.22	0.00	0.00	0.00	0.00
3	405755	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	405053	Transcript	0	0.44	0.69	1.31	0.00	0.63	0.00	3.24
5	360047	Transcript	0	0.00	0.00	0.00	0.00	0.22	0.00	0.00
6	340635	Transcript	0	1.66	1.13	0.00	0.00	0.00	2.19	3.11
7	356665	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	358923	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	317118	Transcript	0	0.00	0.00	0.00	0.00	0.62	0.00	0.00
10	ER1a	ExonRegion	0	4.99	1.02	0.45	0.00	0.00	0.00	0.00
11	E1a_E7a	KnownJunction	0	5.57	1.63	0.00	0.00	0.00	0.00	0.00
12	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E3_Aa	NovelBoundary	0	1.87	3.10	0.53	0.00	1.04	0.00	13.50
15	ER3a	ExonRegion	0	1.32	2.42	2.44	0.00	3.13	0.00	13.88
16	E3_Da	NovelBoundary	0	0.00	1.42	2.76	0.00	1.01	0.00	10.68
17	E3a_E7a	KnownJunction	0	0.88	1.05	4.12	0.00	0.00	0.00	2.15
18	I3_AR1	ActiveIntronRegion	0	0.00	0.35	1.89	0.00	0.29	0.00	7.69
19	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.44	0.00	0.00
20	E4a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER5a	ExonRegion	0	1.64	0.64	0.00	0.00	0.00	1.83	2.39
22	E5a_E7a	KnownJunction	0	1.69	1.63	0.00	0.00	0.00	2.55	3.83
23	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER7a	ExonRegion	0	7.43	2.33	4.05	0.00	2.93	5.66	8.91
25	E7a_E8a	KnownJunction	0	3.81	4.36	2.93	1.25	3.20	7.18	7.11
26	ER8a	ExonRegion	0	3.30	4.14	1.21	0.00	1.55	5.90	10.52
27	E8a_E9a	KnownJunction	0	3.87	1.63	0.00	0.00	0.00	4.42	16.70
28	ER9a	ExonRegion	0	3.90	5.81	1.28	0.72	1.16	7.22	19.60
29	E9a_E10a	KnownJunction	0	2.69	6.75	1.19	1.68	3.23	8.44	22.41
30	ER10a	ExonRegion	0	3.01	4.84	1.02	0.97	1.21	4.46	14.61
31	E10a_E13a	KnownJunction	0	3.86	2.60	0.80	0.00	1.18	1.66	7.08
32	ER10b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.17
33	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E13_Aa	NovelBoundary	0	0.00	0.00	1.24	1.63	0.85	26.77	0.54
36	ER13a	ExonRegion	0	1.79	3.14	6.42	4.89	1.96	31.15	9.06
37	E13a_E16a	KnownJunction	0	1.82	2.63	10.65	6.23	1.96	76.97	3.87
38	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.22	0.00	0.00
40	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	1.01	0.00	0.00
41	ER16a	ExonRegion	0	2.30	0.49	9.43	7.77	3.23	64.36	5.14
42	E16a_E17a	KnownJunction	0	1.39	0.00	10.52	2.93	3.16	49.15	4.99
43	ER17a	ExonRegion	0	3.67	0.53	14.28	4.35	3.08	55.13	6.66
44	E17a_E18a	KnownJunction	0	4.52	0.00	9.51	2.74	3.14	37.44	8.10
45	ER18a	ExonRegion	0	5.33	2.16	16.31	4.04	3.35	41.68	8.71
46	E18a_E19a	KnownJunction	0	6.83	1.44	10.84	4.25	6.25	30.18	9.67
47	ER19a	ExonRegion	0	6.99	1.64	15.08	3.65	9.28	35.12	9.64
48	E19a_E20a	KnownJunction	0	4.71	1.37	14.83	2.44	8.88	51.16	6.36
49	ER20a	ExonRegion	0	9.31	2.39	21.15	4.64	9.22	45.75	8.98
50	E20a_E21a	KnownJunction	0	11.95	1.13	19.96	6.58	9.43	45.96	8.07
51	ER21a	ExonRegion	0	15.26	0.41	26.75	4.96	10.53	53.82	6.52
52	E21a_E22a	KnownJunction	0	14.20	1.63	27.17	4.96	9.38	50.33	6.84
53	ER22a	ExonRegion	0	10.68	0.82	18.65	5.70	7.14	35.02	7.36
54	E22a_E23a	KnownJunction	0	8.26	1.63	14.90	7.42	5.26	34.73	5.70
55	ER23a	ExonRegion	0	4.02	2.13	11.80	5.94	4.14	30.94	9.71
56	E23a_E24a	KnownJunction	0	2.55	1.10	11.58	3.03	2.93	39.80	6.61
57	ER24a	ExonRegion	0	3.07	0.92	12.71	5.65	3.04	44.82	9.02
58	E24_Da	KnownBoundary	0	4.44	0.00	11.55	6.12	0.90	37.52	8.99
59	ER24b	ExonRegion	0	4.02	0.67	9.08	1.89	3.71	28.93	7.74
60	IG8_AR3	ActiveIntergenicRegion	0	0.04	0.00	0.00	0.00	18.35	0.06	0.00
61	IG8_AR2	ActiveIntergenicRegion	0	0.01	0.00	0.00	0.00	14.77	0.00	0.00
62	IG8_SR1	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	12.81	0.00	0.00
63	IG8_AR1	ActiveIntergenicRegion	0	0.13	0.00	0.04	0.11	13.34	0.00	0.00