Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ERBB2IP Gene 0 194.78 78.69 165.59 77.44 87.95 123.17 163.35 2 380936 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 380935 Transcript 1 16.04 5.36 63.96 32.13 3.27 46.04 24.68 4 380943 Transcript 0 0 0 0 0 0 0 0 5 380938 Transcript 0 0.00 0.00 0.00 0.00 0.00 2.79 0.00 6 284037 Transcript 1 49.99 30.21 24.63 30.75 19.65 34.56 14.04 7 380939 Transcript 0 79.34 0.00 36.07 0.00 0.00 0.00 0.00 8 IG42_AR1 ActiveIntergenicRegion 0 20.44 7.92 32.07 5.95 219.59 5.70 29.09 9 IG42_SR1 SilentIntergenicRegion 0 18.97 0.66 27.64 0.92 198.63 2.35 4.95 10 IG42_AR2 ActiveIntergenicRegion 0 14.37 2.02 23.90 3.83 189.16 2.13 11.00 11 IG42_AR3 ActiveIntergenicRegion 0 6.31 3.47 10.90 3.64 84.61 1.78 4.35 12 IG42_AR7 ActiveIntergenicRegion 0 19.75 15.77 15.71 21.72 5.52 30.51 13.79 13 ER1a ExonRegion 0 110.89 53.02 86.02 72.62 35.94 82.50 74.18 14 E1a_E2a KnownJunction 0 132.94 51.65 105.75 86.99 42.95 76.41 76.59 15 E1a_E3a NovelJunction 0 0.73 5.04 2.13 5.63 0.97 12.73 2.06 16 ER2a ExonRegion 0 153.29 84.74 131.31 92.12 41.05 101.63 96.09 17 E2a_E3a KnownJunction 0 149.39 90.51 128.72 77.89 46.66 111.19 99.79 18 ER3a ExonRegion 0 171.63 80.40 160.93 77.60 50.39 114.35 124.41 19 E3a_E4a KnownJunction 0 167.95 63.31 167.36 52.80 41.56 116.36 120.30 20 E3a_E5a NovelJunction 0 3.59 4.62 2.97 11.84 0.00 9.97 0.66 21 ER4a ExonRegion 0 183.31 56.84 176.58 52.90 52.81 96.51 120.36 22 E4a_E5a KnownJunction 0 179.65 37.20 200.62 47.90 52.93 91.92 128.44 23 ER5a ExonRegion 0 276.30 69.86 274.14 63.22 63.04 100.07 149.01 24 E5a_E6a KnownJunction 0 343.53 99.12 290.70 88.07 70.59 118.00 160.38 25 ER6a ExonRegion 0 325.64 95.78 258.14 91.64 78.25 128.25 148.25 26 E6a_E7a KnownJunction 0 296.26 85.15 262.07 110.04 73.68 122.45 141.78 27 E7_Aa NovelBoundary 1 126.39 0.00 115.74 0.00 0.00 0.00 0.63 28 ER7a ExonRegion 0 307.67 97.21 261.76 101.00 65.81 125.72 155.13 29 E7a_E8a KnownJunction 0 261.50 102.64 183.61 90.48 66.95 127.43 130.01 30 ER8a ExonRegion 0 246.91 104.08 187.65 95.90 61.81 114.17 135.29 31 E8a_E9a KnownJunction 0 231.89 98.78 188.29 96.42 58.07 99.43 126.58 32 ER9a ExonRegion 0 197.98 104.35 181.69 81.82 59.85 102.20 133.77 33 E9a_E10a KnownJunction 0 176.36 110.79 169.43 64.48 60.51 87.88 127.19 34 ER10a ExonRegion 0 172.80 92.52 191.35 77.48 70.22 107.19 151.84 35 E10a_E11a KnownJunction 0 200.83 83.49 201.54 65.24 39.95 109.83 159.94 36 ER11a ExonRegion 0 165.03 92.76 192.14 67.71 46.05 125.84 148.87 37 E11a_E12a KnownJunction 0 132.77 89.40 168.84 68.65 44.61 126.20 145.87 38 ER12a ExonRegion 0 145.05 87.42 172.55 73.94 64.67 103.93 145.89 39 E12a_E13a KnownJunction 0 124.56 60.24 153.16 61.39 32.32 79.78 115.00 40 ER13a ExonRegion 0 125.92 67.93 147.98 70.40 50.08 99.84 143.50 41 E13a_E14a KnownJunction 0 135.14 64.58 160.43 64.23 58.83 116.07 156.05 42 ER14a ExonRegion 0 157.64 89.40 170.76 86.45 62.64 116.54 183.69 43 E14a_E15a KnownJunction 0 144.27 96.63 140.93 96.12 64.73 103.90 182.22 44 ER15a ExonRegion 0 195.84 100.42 192.29 91.79 75.73 115.21 205.22 45 E15a_E16a KnownJunction 0 204.10 126.55 182.00 101.97 68.03 118.35 194.21 46 ER16a ExonRegion 0 203.90 114.43 181.47 112.43 70.97 103.65 206.63 47 E16a_E17a KnownJunction 0 265.85 104.95 227.78 106.79 77.37 121.16 220.27 48 ER17a ExonRegion 0 182.93 91.74 170.77 81.67 68.05 93.83 170.04 49 E17a_E18a KnownJunction 0 120.92 71.09 142.93 58.06 63.33 64.13 121.73 50 ER18a ExonRegion 0 217.32 89.35 203.77 88.59 78.78 101.90 176.56 51 E18a_E19a KnownJunction 0 293.41 114.73 257.07 113.08 96.80 125.88 181.78 52 ER19a ExonRegion 0 278.55 112.85 264.92 110.38 94.82 154.81 225.94 53 E19a_E20a KnownJunction 0 187.80 75.43 191.89 70.44 92.05 114.78 164.35 54 ER20a ExonRegion 0 261.40 80.85 231.31 71.36 105.97 108.31 171.75 55 E20a_E21a KnownJunction 0 326.57 80.73 262.06 105.66 115.54 115.10 163.75 56 ER21a ExonRegion 0 251.89 113.91 223.19 112.73 127.08 185.68 247.45 57 E21a_E22a KnownJunction 1 37.82 12.90 27.84 20.97 19.32 31.70 13.92 58 E21a_E23a KnownJunction 1 200.20 52.70 75.10 32.29 76.81 59.52 220.66 59 E21a_E24a KnownJunction 1 16.04 5.36 63.96 32.13 3.27 46.04 24.68 60 I21_AR6 ActiveIntronRegion 1 55.96 27.41 15.13 18.09 10.64 19.72 5.04 61 ER22a ExonRegion 1 54.63 34.31 20.25 32.70 25.82 38.08 18.03 62 E22a_E23a KnownJunction 1 57.53 43.43 25.81 38.58 13.81 33.90 10.18 63 ER23a ExonRegion 1 330.53 117.87 137.36 81.22 168.18 112.41 279.73 64 E23_Da KnownBoundary 1 352.26 119.06 144.55 75.64 251.18 109.48 263.02 65 E23a_E23b KnownJunction 0 79.34 0.00 36.07 0.00 0.00 0.00 0.00 66 ER23b ExonRegion 0 292.73 123.20 128.42 80.39 189.41 100.14 233.49 67 E23_Ab KnownBoundary 1 147.39 71.04 68.10 56.59 110.03 54.62 123.22 68 ER23c ExonRegion 1 237.84 114.65 99.96 75.30 129.62 95.15 179.07 69 E23b_E24a KnownJunction 1 196.07 109.45 78.02 79.70 86.93 88.55 142.11 70 E23b_E25a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 ER24a ExonRegion 0 261.73 93.95 183.10 121.26 154.08 149.91 198.40 72 E24a_E25a KnownJunction 0 358.15 95.00 207.59 127.22 240.19 165.70 236.91 73 E24a_E26a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.79 0.00 74 ER25a ExonRegion 0 277.25 80.89 191.08 115.29 148.56 189.98 236.68 75 E25a_E26a KnownJunction 0 196.64 76.03 168.06 89.45 77.76 204.00 178.45 76 ER26a ExonRegion 0 155.55 49.94 123.28 52.24 79.14 103.57 123.84 77 IG43_SR1 SilentIntergenicRegion 0 9.14 2.26 4.85 1.99 1.88 4.20 8.29 78 IG43_AR1 ActiveIntergenicRegion 0 8.15 3.07 3.22 4.51 1.56 2.69 8.39 79 IG43_AR2 ActiveIntergenicRegion 0 7.62 1.90 1.32 4.24 0.19 1.38 8.24