Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CSPG2 Gene 0 0.35 0.09 2.32 3.22 689.19 85.59 101.80 2 343200 Transcript 0 0.00 0.00 0.00 1.68 404.39 35.51 60.39 3 348134 Transcript 0 0.00 0.00 0.00 1.00 2.35 21.60 0.00 4 265077 Transcript 0 0.00 0.00 0.00 0.00 235.28 6.65 10.96 5 342785 Transcript 0 0.00 0.00 0.00 0.00 3.23 4.93 0.00 6 IG38_AR7 ActiveIntergenicRegion 0 0.00 0.00 0.35 0.86 70.46 4.80 1.62 7 ER1a ExonRegion 0 0.44 0.00 0.91 4.88 140.62 99.89 39.95 8 E1a_E2a KnownJunction 0 0.00 0.00 1.37 4.12 183.64 94.52 64.26 9 ER2a ExonRegion 0 0.03 0.00 1.99 2.72 208.60 89.05 50.12 10 E2a_E3a KnownJunction 0 0.00 0.00 2.18 1.63 171.28 66.25 38.31 11 ER3a ExonRegion 0 0.05 0.00 1.79 2.45 304.15 74.27 68.44 12 E3a_E4a KnownJunction 0 0.92 0.00 2.47 3.03 423.07 79.17 97.21 13 ER4a ExonRegion 0 0.80 0.00 3.00 2.95 472.03 87.35 86.63 14 E4a_E5a KnownJunction 0 1.50 0.00 2.74 3.14 497.78 70.13 75.02 15 ER5a ExonRegion 0 1.01 0.00 1.52 3.64 450.16 82.68 75.70 16 E5a_E6a KnownJunction 0 0.00 0.00 0.00 4.12 407.48 79.68 84.91 17 ER6a ExonRegion 0 0.00 0.00 0.99 2.82 361.77 76.97 83.02 18 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 96.38 29.27 13.97 19 E6a_E8a KnownJunction 0 0.00 0.00 0.00 1.68 404.39 35.51 60.39 20 E6a_E9a KnownJunction 0 0.00 0.00 0.00 1.00 2.35 21.60 0.00 21 ER7a ExonRegion 0 0.12 0.00 0.40 0.67 140.45 17.56 21.00 22 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 235.28 6.65 10.96 23 E7a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 3.23 4.93 0.00 24 ER8a ExonRegion 0 0.40 0.16 3.18 3.44 838.56 94.78 133.81 25 E8a_E9a KnownJunction 0 0.00 0.00 2.41 8.07 1494.19 100.63 174.41 26 ER9a ExonRegion 0 0.32 0.00 4.19 7.88 1422.67 166.81 198.62 27 E9a_E10a KnownJunction 0 1.00 0.00 2.87 5.53 1442.55 160.02 179.79 28 ER10a ExonRegion 0 0.28 0.00 1.85 12.26 1573.31 185.63 219.53 29 E10a_E11a KnownJunction 0 0.73 0.00 4.14 13.44 1949.65 213.27 206.11 30 ER11a ExonRegion 0 0.55 0.00 2.95 8.67 1752.44 181.12 221.47 31 E11a_E12a KnownJunction 0 0.00 0.00 3.75 6.18 2145.94 159.03 195.90 32 ER12a ExonRegion 0 0.00 0.00 2.64 7.60 1787.98 219.39 265.98 33 E12a_E13a KnownJunction 0 0.00 0.00 2.20 8.34 1922.65 255.35 251.77 34 ER13a ExonRegion 0 0.27 0.00 2.31 6.36 1562.45 209.15 224.81 35 E13a_E14a KnownJunction 0 0.00 0.00 2.59 5.96 2077.27 197.19 171.78 36 ER14a ExonRegion 0 0.32 0.00 2.14 4.68 1375.68 174.47 164.03 37 E14_Da NovelBoundary 0 1.84 0.00 0.73 0.00 471.87 45.43 47.82 38 E14a_E15a KnownJunction 0 0.00 0.00 0.59 1.35 972.23 127.33 104.69 39 I14 Intron 0 0.47 0.00 0.00 0.00 245.32 15.15 18.98 40 I14_AR1 ActiveIntronRegion 0 0.48 0.00 0.00 0.00 248.83 15.38 19.26 41 E15_Aa NovelBoundary 0 0.00 0.00 2.90 1.08 478.55 33.98 47.39 42 ER15a ExonRegion 0 0.95 0.22 4.49 6.66 1425.54 173.03 135.11 43 IG39_AR1 ActiveIntergenicRegion 0 0.38 0.17 2.29 1.75 470.16 77.92 41.59 44 IG39_SR1 SilentIntergenicRegion 0 0.00 0.00 0.00 0.24 10.06 1.06 0.93 45 IG39_AR2 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.11 9.94 0.42 0.77