Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC091435.3	Gene	0	0.45	0.27	0.28	0.07	0.09	0.07	1.13
2	381785	Transcript	0	0.00	0.00	0.05	0.00	0.00	0.08	0.05
3	381784	Transcript	0	0.66	0.31	0.30	0.00	0.13	0.14	1.05
4	381783	Transcript	0	0.33	0.31	0.37	0.25	0.00	0.26	1.65
5	IG18_AR20	ActiveIntergenicRegion	0	0.88	0.00	6.67	2.33	0.00	9.24	0.00
6	IG18_AR21	ActiveIntergenicRegion	0	0.10	0.00	5.40	1.43	0.00	10.76	0.13
7	IG18_AR33	ActiveIntergenicRegion	0	1.77	0.00	9.00	0.78	0.00	9.87	0.85
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3b	ExonRegion	0	0.08	0.00	0.00	0.00	0.23	0.00	0.00
14	E3_Ac	KnownBoundary	0	2.74	0.00	0.00	0.00	1.18	0.00	0.79
15	ER3c	ExonRegion	0	0.64	0.00	0.00	0.00	0.40	0.00	0.00
16	E3_Da	KnownBoundary	0	0.00	0.00	0.79	0.00	0.00	0.00	0.00
17	E3a_E3d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E3a_E3e	NovelJunction	0	0.00	0.00	0.66	0.00	21.05	0.00	0.00
19	E3_Db	KnownBoundary	0	0.98	0.00	0.00	0.00	0.00	0.00	0.00
20	ER3d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER3e	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E3c_E3e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER3f	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER3g	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E3d_E3f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.89
26	ER3h	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E3e_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER3i	ExonRegion	0	0.00	0.00	0.11	0.00	0.00	0.00	0.11
29	ER3j	ExonRegion	0	0.99	0.00	0.77	0.00	0.35	0.35	0.67
30	ER3k	ExonRegion	0	4.03	1.36	2.28	0.00	1.20	1.23	4.40
31	E3f_E3h	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER3l	ExonRegion	0	4.61	2.43	1.35	0.00	0.00	1.23	6.07
33	ER3m	ExonRegion	0	1.95	1.40	0.45	0.00	0.00	0.00	4.13
34	E3_Ah	KnownBoundary	0	0.73	1.31	0.89	1.19	0.00	0.00	2.95
35	ER3n	ExonRegion	0	0.06	0.35	0.00	0.00	0.00	0.00	0.10
36	E3_Dg	NovelBoundary	0	0.00	1.63	4.20	0.00	0.00	4.48	7.78
37	E3g_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E3_Dh	NovelBoundary	0	1.85	0.00	3.36	0.00	1.18	0.00	8.91
39	E3h_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER3o	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E4b_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER4b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	ER4c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	E6a_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	E7a_E8b	KnownJunction	0	0.00	0.00	0.86	0.00	0.00	1.58	0.89
54	ER7b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
56	E8a_E8c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER8b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	ER8c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	E8b_E8d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	ER8d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
61	ER8e	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	E8_Ad	KnownBoundary	0	1.03	0.00	0.89	3.20	0.00	0.00	3.40
63	E8_Dc	KnownBoundary	0	1.99	0.00	0.00	0.00	0.00	0.00	4.16
64	E8c_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	ER8f	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	ER8g	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	E8d_E9c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
69	E9a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
70	ER9b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
71	E9b_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
72	ER9c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	E9c_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
74	ER9d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
75	ER9e	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
76	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
77	E12_Aa	NovelBoundary	0	4.46	4.28	5.88	0.00	0.00	0.00	9.72
78	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
79	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
80	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
81	E13_Aa	NovelBoundary	0	3.74	1.63	2.59	1.57	0.00	4.74	9.87
82	ER13a	ExonRegion	0	0.00	0.00	0.43	0.00	0.00	0.00	0.00
83	E13_Da	NovelBoundary	0	0.85	1.21	0.00	0.00	0.00	5.98	8.61
84	E13_Db	NovelBoundary	0	2.50	0.00	2.50	1.35	0.00	0.00	8.20
85	E13b_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
86	ER13b	ExonRegion	0	0.00	0.00	0.68	0.00	0.00	0.00	0.22
87	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
88	ER15a	ExonRegion	0	1.51	1.77	1.69	0.96	0.00	0.00	8.63
89	E15a_E16a	KnownJunction	0	5.49	4.68	5.95	4.66	0.00	6.24	24.38
90	ER16a	ExonRegion	0	1.03	0.94	0.58	0.43	0.00	0.00	6.27
91	E16_Da	NovelBoundary	0	4.62	1.58	1.35	1.68	0.00	0.00	7.84
92	E17_Aa	NovelBoundary	0	15.56	88.93	14.10	85.69	19.66	73.14	12.35
93	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
94	ER17b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
95	IG19_SR2	SilentIntergenicRegion	0	9.69	3.39	6.96	1.49	0.47	2.25	6.60
96	IG19_AR3	ActiveIntergenicRegion	0	9.93	2.90	9.17	1.42	0.56	2.70	5.18
97	IG19_AR4	ActiveIntergenicRegion	0	13.75	9.51	11.03	9.76	0.27	15.42	6.20