Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NIPBL	Gene	0	187.95	143.02	240.43	295.78	147.09	191.30	60.95
2	282516	Transcript	0	209.28	150.90	269.99	317.79	173.56	193.80	69.17
3	IG10_SR9	SilentIntergenicRegion	0	2.78	1.13	10.31	3.41	2.23	2.34	1.06
4	IG10_AR10	ActiveIntergenicRegion	0	16.90	10.29	25.04	20.82	21.17	8.81	5.45
5	ER1a	ExonRegion	0	20.20	53.60	23.61	100.31	5.77	65.33	6.38
6	E1a_E2a	KnownJunction	0	60.72	132.36	96.63	281.40	33.01	157.50	27.56
7	ER2a	ExonRegion	0	81.15	178.43	129.26	367.64	40.49	198.98	36.88
8	E2a_E3a	KnownJunction	0	83.72	187.08	132.49	496.99	46.54	205.77	39.64
9	ER3a	ExonRegion	0	127.43	237.33	190.46	507.81	87.74	242.66	50.39
10	E3a_E4a	KnownJunction	0	219.07	223.31	248.36	523.64	154.36	228.28	69.22
11	ER4a	ExonRegion	0	373.45	323.64	343.87	659.24	164.25	316.66	75.25
12	E4a_E5a	KnownJunction	1	566.92	320.91	496.71	767.52	167.41	375.76	90.19
13	ER5a	ExonRegion	0	449.39	364.58	424.95	730.03	179.63	381.59	88.83
14	E5a_E6a	KnownJunction	0	255.19	247.11	237.07	464.67	113.83	252.48	55.45
15	ER6a	ExonRegion	0	303.44	261.07	293.95	512.43	146.57	254.45	77.91
16	E6a_E7a	KnownJunction	0	133.52	238.94	187.52	479.57	98.44	235.81	58.74
17	ER7a	ExonRegion	0	160.71	256.11	211.26	469.11	96.39	226.02	77.51
18	E7a_E8a	KnownJunction	0	123.07	218.81	161.70	389.92	76.67	191.32	61.85
19	ER8a	ExonRegion	0	132.16	240.09	192.85	430.12	73.58	217.17	65.46
20	E8a_E9a	KnownJunction	0	135.99	223.94	225.71	448.20	84.58	202.79	69.92
21	ER9a	ExonRegion	0	220.05	216.74	303.32	423.44	112.70	231.74	74.36
22	E9a_E10a	KnownJunction	0	97.24	116.57	154.68	241.68	42.42	135.53	41.46
23	E9a_E11a	NovelJunction	1	13.60	0.00	11.51	11.57	0.00	1.63	0.00
24	ER10a	ExonRegion	0	192.20	139.24	236.06	261.61	85.97	169.08	49.67
25	E10a_E11a	KnownJunction	0	223.49	102.83	332.18	206.89	125.29	184.78	61.42
26	E10a_E12a	NovelJunction	1	0.75	12.30	2.20	3.36	0.00	0.00	2.16
27	E10a_E13a	NovelJunction	1	2.87	20.57	4.31	13.74	0.00	4.69	0.62
28	ER11a	ExonRegion	0	222.32	106.95	278.77	238.95	136.55	171.75	55.98
29	E11a_E12a	KnownJunction	0	195.32	115.38	258.32	232.93	95.60	130.01	58.33
30	E11a_E13a	NovelJunction	0	8.43	5.46	11.08	18.72	0.00	16.86	2.26
31	ER12a	ExonRegion	0	147.33	90.31	181.48	181.85	111.57	97.17	46.50
32	E12a_E13a	KnownJunction	0	122.09	65.65	167.85	162.36	87.14	85.06	39.57
33	ER13a	ExonRegion	0	191.68	97.46	235.01	247.47	123.07	119.91	54.70
34	E13a_E14a	KnownJunction	0	249.83	125.16	310.61	295.46	132.05	141.26	68.98
35	ER14a	ExonRegion	0	198.38	109.97	258.99	276.51	106.98	133.17	51.12
36	E14a_E15a	KnownJunction	0	160.36	99.91	210.93	206.98	100.26	121.86	38.37
37	ER15a	ExonRegion	0	177.25	91.35	254.27	186.00	131.97	129.83	52.36
38	E15a_E16a	KnownJunction	0	150.98	88.90	226.43	156.02	146.16	112.13	43.78
39	ER16a	ExonRegion	0	138.67	95.48	205.36	177.21	107.46	114.69	43.72
40	E16a_E17a	KnownJunction	0	129.98	106.14	205.54	179.56	81.51	119.26	49.26
41	ER17a	ExonRegion	0	155.65	135.66	259.22	217.25	146.34	120.25	61.20
42	E17a_E18a	KnownJunction	0	187.11	157.31	279.99	225.43	184.40	150.45	56.18
43	ER18a	ExonRegion	0	277.73	146.21	347.75	255.64	212.06	144.50	73.97
44	E18a_E19a	KnownJunction	0	308.30	156.10	387.37	320.46	167.71	174.31	75.81
45	ER19a	ExonRegion	0	377.44	147.97	421.94	310.91	225.29	182.39	80.07
46	E19a_E20a	KnownJunction	0	366.11	106.48	413.64	298.65	261.81	152.52	73.69
47	ER20a	ExonRegion	0	318.08	116.63	363.20	236.68	223.25	151.30	80.48
48	E20a_E21a	KnownJunction	0	294.43	157.92	355.57	261.84	177.23	171.38	73.12
49	ER21a	ExonRegion	0	243.33	148.65	311.83	250.91	158.90	148.80	70.44
50	E21a_E22a	KnownJunction	0	219.24	103.77	295.48	224.34	137.93	145.76	70.18
51	ER22a	ExonRegion	0	206.61	125.53	292.27	241.96	172.01	134.22	70.58
52	E22a_E23a	KnownJunction	0	174.84	91.03	233.76	232.28	155.47	118.40	58.17
53	ER23a	ExonRegion	0	139.40	104.19	241.46	236.88	148.79	126.07	66.76
54	E23a_E24a	KnownJunction	0	147.84	123.42	241.97	239.84	141.11	157.96	62.21
55	ER24a	ExonRegion	0	189.06	144.36	267.03	264.60	165.68	148.88	69.24
56	E24a_E25a	KnownJunction	0	229.12	138.61	308.32	242.33	234.12	162.03	78.62
57	ER25a	ExonRegion	0	335.18	160.02	391.28	341.86	254.72	215.54	96.38
58	E25a_E26a	KnownJunction	0	358.17	196.67	370.24	386.08	210.10	236.56	79.71
59	ER26a	ExonRegion	0	322.35	151.49	355.71	314.33	229.79	196.44	85.28
60	E26a_E27a	KnownJunction	0	261.60	127.86	318.75	317.78	208.56	156.27	72.70
61	ER27a	ExonRegion	0	243.46	151.76	304.53	287.79	181.00	184.32	82.08
62	E27a_E28a	KnownJunction	0	248.21	170.13	338.18	317.29	182.67	191.78	80.20
63	ER28a	ExonRegion	0	246.63	160.72	321.24	341.83	220.93	191.58	88.64
64	E28a_E29a	KnownJunction	0	176.46	138.29	253.39	275.68	217.73	205.61	77.68
65	ER29a	ExonRegion	0	197.11	134.24	291.43	305.58	206.42	181.86	77.20
66	E29a_E30a	KnownJunction	0	212.81	147.88	320.47	338.34	178.01	214.24	81.85
67	ER30a	ExonRegion	0	259.15	165.17	374.17	332.85	234.38	225.62	76.48
68	E30a_E31a	KnownJunction	0	256.17	146.07	328.46	284.70	193.99	214.67	72.69
69	ER31a	ExonRegion	0	258.10	128.74	364.38	293.50	231.03	185.47	87.99
70	E31a_E32a	KnownJunction	0	220.92	84.70	293.46	245.01	287.61	130.51	77.65
71	ER32a	ExonRegion	0	253.53	112.42	313.10	253.71	277.94	160.02	91.08
72	E32a_E33a	KnownJunction	0	227.83	110.37	277.61	240.84	216.56	150.91	78.25
73	E32a_E34a	NovelJunction	1	6.41	1.47	6.54	10.43	0.00	0.00	0.00
74	E32a_E35a	NovelJunction	1	2.79	12.93	9.84	28.31	3.14	6.49	0.00
75	ER33a	ExonRegion	0	225.05	141.42	311.87	318.27	218.79	176.51	86.58
76	E33a_E34a	KnownJunction	0	186.81	136.74	281.49	337.12	202.93	165.60	91.28
77	ER34a	ExonRegion	0	202.69	151.21	292.69	340.68	243.71	226.34	96.28
78	E34a_E35a	KnownJunction	0	135.39	125.89	231.03	317.21	219.26	187.79	92.32
79	ER35a	ExonRegion	0	155.79	142.50	257.22	287.97	194.32	214.17	85.20
80	E35a_E36a	KnownJunction	0	143.90	144.13	231.62	284.62	199.68	206.20	75.87
81	ER36a	ExonRegion	0	137.17	139.64	243.92	253.01	165.11	193.79	74.70
82	E36a_E37a	KnownJunction	0	157.22	151.22	285.85	273.62	200.67	226.99	74.19
83	ER37a	ExonRegion	0	164.19	121.03	266.99	246.16	166.91	190.08	71.59
84	E37a_E38a	KnownJunction	0	137.51	104.88	253.21	229.84	105.44	154.63	57.31
85	ER38a	ExonRegion	0	155.74	122.53	271.41	199.34	121.50	182.01	65.00
86	E38a_E39a	KnownJunction	0	152.43	113.47	245.42	168.43	153.99	133.22	58.59
87	ER39a	ExonRegion	0	217.87	104.09	327.36	230.76	206.60	170.36	74.81
88	E39a_E40a	KnownJunction	0	214.17	162.94	278.77	341.86	215.80	206.49	81.96
89	ER40a	ExonRegion	0	271.98	190.15	321.28	454.44	274.64	311.20	94.49
90	E40a_E41a	KnownJunction	0	206.42	205.34	250.65	495.63	403.93	331.54	112.67
91	ER41a	ExonRegion	0	240.49	221.21	315.35	518.25	325.02	357.76	115.12
92	E41a_E42a	KnownJunction	0	232.41	227.88	252.31	443.21	253.70	305.22	85.86
93	ER42a	ExonRegion	0	162.15	188.73	224.07	395.93	221.30	288.77	85.70
94	E42a_E43a	KnownJunction	0	162.86	111.39	186.48	284.81	195.53	201.75	68.69
95	E42a_E44a	NovelJunction	0	14.69	32.42	15.94	67.05	4.40	61.85	8.36
96	E42a_E45a	NovelJunction	0	6.19	17.50	7.66	44.29	0.00	28.60	0.89
97	ER43a	ExonRegion	0	229.47	125.70	251.28	350.87	279.50	226.48	80.21
98	E43a_E44a	KnownJunction	0	258.91	138.84	266.66	395.83	255.08	249.69	95.46
99	E43a_E45a	NovelJunction	0	11.32	6.23	3.13	22.49	0.00	6.00	0.00
100	ER44a	ExonRegion	0	299.40	142.91	327.00	344.35	252.51	264.46	77.82
101	E44a_E45a	KnownJunction	0	234.73	125.31	310.30	323.82	209.32	210.51	53.30
102	E44a_E46a	NovelJunction	1	8.61	1.63	6.93	6.01	2.35	15.14	0.00
103	ER45a	ExonRegion	0	229.01	151.92	301.68	396.41	218.12	275.55	67.49
104	E45a_E46a	KnownJunction	0	213.73	161.12	245.30	336.23	326.61	307.23	61.35
105	ER46a	ExonRegion	0	237.24	187.67	251.12	418.00	285.99	367.30	78.26
106	E46_Da	NovelBoundary	0	211.33	133.93	147.61	281.02	162.20	197.30	50.42
107	E46a_E47a	KnownJunction	0	83.73	64.55	93.68	165.82	184.81	152.76	36.32
108	I46	Intron	0	51.31	28.91	62.81	48.32	26.30	50.06	17.07
109	I46_AR1	ActiveIntronRegion	0	51.48	29.01	63.02	48.49	26.38	50.22	17.13
110	E47_Aa	NovelBoundary	0	34.06	21.54	20.84	46.98	17.84	51.88	12.54
111	ER47a	ExonRegion	0	59.55	64.02	79.49	161.32	100.43	158.43	26.83
112	IG11_AR5	ActiveIntergenicRegion	0	9.95	0.95	2.79	0.81	2.75	3.18	9.20