Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PLEKHG4B	Gene	0	11.29	10.05	3.32	5.44	43.46	1.58	0.21
2	398036	Transcript	0	0	0	0	0	0	0	0
3	283426	Transcript	0	0	0	0	0	0	0	0
4	382820	Transcript	0	2.41	3.44	0.65	1.64	6.63	0.74	0.00
5	IG1_AR1	ActiveIntergenicRegion	0	7.21	6.28	1.20	4.38	44.19	0.00	0.00
6	IG1_AR2	ActiveIntergenicRegion	0	9.30	15.81	3.01	5.21	38.28	3.27	0.00
7	IG1_AR3	ActiveIntergenicRegion	0	10.96	26.26	3.91	13.10	64.04	3.43	0.00
8	IG1_SR4	SilentIntergenicRegion	0	6.16	15.09	1.95	7.67	27.08	1.15	0.00
9	ER1a	ExonRegion	0	5.96	12.04	3.69	7.23	31.12	1.53	0.00
10	E1a_E2a	KnownJunction	0	14.10	5.15	3.91	4.66	55.65	1.66	0.00
11	I1	Intron	0	3.33	5.08	1.14	3.81	22.96	0.17	0.00
12	I1_AR1	ActiveIntronRegion	0	3.41	7.26	0.94	4.14	15.78	0.00	0.00
13	I1_AR2	ActiveIntronRegion	0	6.03	10.29	2.23	6.60	33.49	0.27	0.00
14	I1_SR2	SilentIntronRegion	0	3.43	3.59	0.96	2.44	31.80	0.00	0.00
15	E2_Aa	NovelBoundary	0	2.59	5.02	1.54	5.23	28.08	0.00	0.00
16	ER2a	ExonRegion	0	9.99	19.08	3.32	7.19	66.00	3.65	0.00
17	E2a_E3a	KnownJunction	0	10.63	20.33	5.04	9.24	59.80	3.83	0.00
18	ER3a	ExonRegion	0	13.37	21.45	4.28	13.35	79.54	5.39	0.00
19	E3a_E4a	KnownJunction	0	12.18	12.69	4.81	12.11	75.41	0.00	0.00
20	E4_Aa	NovelBoundary	0	3.17	7.62	2.43	5.12	21.23	0.00	0.00
21	ER4a	ExonRegion	0	13.90	16.84	4.26	9.29	111.75	4.07	0.00
22	E4a_E5a	KnownJunction	0	20.75	12.66	5.17	14.58	174.83	4.31	0.00
23	ER5a	ExonRegion	0	38.55	30.19	11.90	20.15	247.98	6.89	0.00
24	E5a_E6a	KnownJunction	0	35.97	34.91	14.56	19.29	142.74	5.41	0.00
25	I5_AR1	ActiveIntronRegion	0	7.01	0.00	2.95	1.94	14.86	0.76	0.00
26	ER6a	ExonRegion	0	26.63	36.50	8.76	17.30	128.72	1.95	0.00
27	E6a_E7a	KnownJunction	0	27.15	43.56	7.60	23.49	130.73	5.15	0.00
28	ER7a	ExonRegion	0	36.68	44.16	10.20	19.84	267.62	4.15	0.00
29	E7_Da	NovelBoundary	0	26.54	5.52	5.53	6.01	17.80	0.00	0.00
30	E7a_E8a	KnownJunction	0	9.28	17.65	2.36	7.07	89.70	1.66	0.00
31	I7	Intron	0	7.85	3.38	2.48	2.72	21.82	0.00	0.00
32	I7_SR1	SilentIntronRegion	0	7.89	3.40	2.48	2.73	21.92	0.00	0.00
33	ER8a	ExonRegion	0	11.94	24.01	3.85	13.93	82.78	1.88	0.00
34	E8a_E9a	KnownJunction	0	9.31	22.41	5.42	8.53	53.55	2.89	0.00
35	ER9a	ExonRegion	0	11.10	29.27	4.32	14.29	48.84	0.41	0.00
36	E9_Da	NovelBoundary	0	3.27	8.41	0.00	1.54	28.93	0.00	0.00
37	E9a_E10a	KnownJunction	0	13.97	18.07	4.53	12.62	28.31	0.00	0.00
38	I9_AR1	ActiveIntronRegion	0	0.88	3.73	0.48	0.48	14.08	0.00	0.00
39	ER10a	ExonRegion	0	10.36	17.18	5.80	10.79	25.88	0.63	0.00
40	E10a_E11a	KnownJunction	0	17.39	16.84	6.08	6.77	19.64	0.00	0.00
41	ER11a	ExonRegion	0	8.78	8.41	1.88	6.94	19.08	0.44	0.00
42	E11_Da	NovelBoundary	0	7.34	2.94	2.40	2.74	15.45	0.00	0.00
43	E11a_E12b	KnownJunction	0	4.14	4.10	0.53	6.18	14.09	0.00	0.00
44	I11	Intron	0	5.24	3.84	2.24	2.15	24.59	0.44	0.04
45	I11_SR1	SilentIntronRegion	0	5.24	3.84	2.24	2.15	24.60	0.44	0.04
46	E12_Aa	NovelBoundary	0	210.88	164.43	183.85	117.09	85.06	82.89	81.59
47	ER12a	ExonRegion	0	4.60	2.48	2.09	1.99	23.10	1.18	0.00
48	E12_Ab	KnownBoundary	0	2.54	1.29	2.43	0.00	25.54	1.47	0.00
49	ER12b	ExonRegion	0	12.24	14.61	5.05	9.02	53.78	0.85	0.00
50	E12a_E13a	KnownJunction	0	13.35	16.26	5.83	6.47	48.50	0.00	0.00
51	ER13a	ExonRegion	0	12.02	11.19	4.27	4.99	48.01	0.84	0.00
52	E13_Da	NovelBoundary	0	1.75	2.52	3.03	1.68	15.95	0.00	0.00
53	E13a_E14a	KnownJunction	0	11.52	11.85	1.58	1.08	42.95	1.21	0.00
54	ER14a	ExonRegion	0	11.48	9.54	2.54	6.56	45.63	0.96	0.22
55	E14a_E15a	KnownJunction	0	10.06	9.93	1.32	10.43	40.27	1.23	0.00
56	ER15a	ExonRegion	0	8.61	15.68	3.09	12.04	55.44	3.66	0.00
57	E15a_E16a	KnownJunction	0	8.83	14.95	1.24	6.94	69.67	0.00	0.00
58	ER16a	ExonRegion	0	7.51	10.63	3.06	7.69	58.55	0.86	0.00
59	E16a_E17a	KnownJunction	0	0.67	1.55	0.00	1.22	0.00	1.61	0.00
60	E16a_E18a	KnownJunction	0	6.94	2.00	5.82	6.69	52.31	0.00	0.00
61	ER17a	ExonRegion	0	2.69	5.53	0.50	2.14	3.44	0.17	0.00
62	E17a_E18a	KnownJunction	0	1.69	4.20	0.00	1.22	0.00	0.00	0.00
63	I17_AR2	ActiveIntronRegion	0	0.00	1.21	1.04	1.25	9.14	1.93	0.00
64	ER18a	ExonRegion	0	14.29	13.26	5.90	10.18	54.79	1.51	0.00
65	E18a_E19a	KnownJunction	0	17.14	22.83	5.56	7.64	46.66	2.52	0.00
66	ER19a	ExonRegion	0	23.35	18.88	6.71	8.91	66.86	2.74	0.17
67	E19_Da	KnownBoundary	0	54.71	27.40	17.93	6.26	76.05	0.00	0.00
68	ER19b	ExonRegion	0	10.56	7.03	2.83	3.42	36.28	1.48	0.32